RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 TMEM39AQ9NV64 488 aa24.78■■□□□ 1.56
VSX1-206ENST00000444511 MTMR10Q9NXD2 777 aa24.78■■□□□ 1.56
VSX1-206ENST00000444511 CYP39A1Q9NYL5 469 aa24.78■■□□□ 1.56
VSX1-206ENST00000444511 FRMPD2Q68DX3 1309 aaPredicted RBP24.78■■□□□ 1.56
VSX1-206ENST00000444511 KIAA0355O15063 1070 aa24.77■■□□□ 1.56
VSX1-206ENST00000444511 ASGR1P07306 291 aa24.77■■□□□ 1.56
VSX1-206ENST00000444511 IRX5P78411 483 aaPredicted RBP24.77■■□□□ 1.56
VSX1-206ENST00000444511 GNASQ5JWF2 1037 aa24.77■■□□□ 1.56
VSX1-206ENST00000444511 C9orf50Q5SZB4 431 aa24.77■■□□□ 1.56
VSX1-206ENST00000444511 BTNL9Q6UXG8 535 aa24.77■■□□□ 1.56
VSX1-206ENST00000444511 NOL8Q76FK4 1167 aaKnown RBP24.77■■□□□ 1.56
VSX1-206ENST00000444511 ANKRD33Q7Z3H0 272 aa24.77■■□□□ 1.56
VSX1-206ENST00000444511 TBC1D10CQ8IV04 446 aa24.77■■□□□ 1.56
VSX1-206ENST00000444511 VTI1AQ96AJ9 217 aa24.77■■□□□ 1.56
VSX1-206ENST00000444511 TOX2Q96NM4 488 aa24.77■■□□□ 1.56
VSX1-206ENST00000444511 TNFAIP2Q03169 654 aa24.76■■□□□ 1.55
VSX1-206ENST00000444511 CWC27Q6UX04 472 aaKnown RBP24.76■■□□□ 1.55
VSX1-206ENST00000444511 TTC14Q96N46 770 aa24.76■■□□□ 1.55
VSX1-206ENST00000444511 ELP1O95163 1332 aa24.76■■□□□ 1.55
VSX1-206ENST00000444511 ZNF213O14771 459 aa24.75■■□□□ 1.55
VSX1-206ENST00000444511 PDHBP11177 359 aa24.75■■□□□ 1.55
VSX1-206ENST00000444511 ITGB8P26012 769 aa24.75■■□□□ 1.55
VSX1-206ENST00000444511 FAAP100Q0VG06 881 aa24.75■■□□□ 1.55
VSX1-206ENST00000444511 SLC17A8Q8NDX2 589 aa24.75■■□□□ 1.55
VSX1-206ENST00000444511 ESR2Q92731 530 aa24.75■■□□□ 1.55
VSX1-206ENST00000444511 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.74■■□□□ 1.55
VSX1-206ENST00000444511 HIP1O00291 1037 aa24.74■■□□□ 1.55
VSX1-206ENST00000444511 FAM109BQ6ICB4 259 aaPredicted RBP24.74■■□□□ 1.55
VSX1-206ENST00000444511 STXBP5LQ9Y2K9 1186 aa24.74■■□□□ 1.55
VSX1-206ENST00000444511 ASTN1O14525 1302 aa24.74■■□□□ 1.55
VSX1-206ENST00000444511 MROH7Q68CQ1 1323 aa24.74■■□□□ 1.55
VSX1-206ENST00000444511 NEDD4P46934 1319 aa24.73■■□□□ 1.55
VSX1-206ENST00000444511 DDX49Q9Y6V7 483 aaKnown RBP24.73■■□□□ 1.55
VSX1-206ENST00000444511 MCM3APO60318 1980 aa24.73■■□□□ 1.55
VSX1-206ENST00000444511 A0A0U1RQG5 324 aaPredicted RBP24.72■■□□□ 1.55
VSX1-206ENST00000444511 BEX3Q00994 111 aa24.72■■□□□ 1.55
VSX1-206ENST00000444511 FPGSQ05932 587 aa24.72■■□□□ 1.55
VSX1-206ENST00000444511 ZNF543Q08ER8 600 aa24.72■■□□□ 1.55
VSX1-206ENST00000444511 EEPD1Q7L9B9 569 aa24.72■■□□□ 1.55
VSX1-206ENST00000444511 TLK2Q86UE8 772 aa24.72■■□□□ 1.55
VSX1-206ENST00000444511 AP5M1Q9H0R1 490 aa24.72■■□□□ 1.55
VSX1-206ENST00000444511 ADD3Q9UEY8 706 aaKnown RBP24.72■■□□□ 1.55
VSX1-206ENST00000444511 PNMA2Q9UL42 364 aa24.72■■□□□ 1.55
VSX1-206ENST00000444511 NFIBO00712 420 aa24.71■■□□□ 1.55
VSX1-206ENST00000444511 CTAGE5O15320 804 aa24.71■■□□□ 1.55
VSX1-206ENST00000444511 NKX3-2P78367 333 aa24.71■■□□□ 1.55
VSX1-206ENST00000444511 BAATQ14032 418 aaPredicted RBP24.71■■□□□ 1.55
VSX1-206ENST00000444511 FBXO16Q8IX29 292 aaPredicted RBP24.71■■□□□ 1.55
VSX1-206ENST00000444511 PURBQ96QR8 312 aaKnown RBP24.71■■□□□ 1.55
VSX1-206ENST00000444511 ZKSCAN3Q9BRR0 538 aa24.71■■□□□ 1.55
VSX1-206ENST00000444511 GNEQ9Y223 722 aaKnown RBP24.71■■□□□ 1.55
VSX1-206ENST00000444511 PTPDC1A2A3K4 754 aa24.7■■□□□ 1.54
VSX1-206ENST00000444511 ARVCFO00192 962 aa24.7■■□□□ 1.54
VSX1-206ENST00000444511 SNHG28P0DPA3 235 aa24.7■■□□□ 1.54
VSX1-206ENST00000444511 NT5C2P49902 561 aa24.7■■□□□ 1.54
VSX1-206ENST00000444511 CDK7P50613 346 aa24.7■■□□□ 1.54
VSX1-206ENST00000444511 ZNF697Q5TEC3 545 aa24.7■■□□□ 1.54
VSX1-206ENST00000444511 IQSEC1Q6DN90 963 aa24.7■■□□□ 1.54
VSX1-206ENST00000444511 IQCA1Q86XH1 822 aa24.7■■□□□ 1.54
VSX1-206ENST00000444511 RNPC3Q96LT9 517 aaKnown RBP24.7■■□□□ 1.54
VSX1-206ENST00000444511 FAM161BQ96MY7 647 aa24.7■■□□□ 1.54
VSX1-206ENST00000444511 VTA1Q9NP79 307 aa24.7■■□□□ 1.54
VSX1-206ENST00000444511 PDGFCQ9NRA1 345 aa24.7■■□□□ 1.54
VSX1-206ENST00000444511 DYNC1LI2O43237 492 aaPredicted RBP24.69■■□□□ 1.54
VSX1-206ENST00000444511 KDM4AO75164 1064 aa24.69■■□□□ 1.54
VSX1-206ENST00000444511 SMPD1P17405 629 aa24.69■■□□□ 1.54
VSX1-206ENST00000444511 EPHB4P54760 987 aa24.69■■□□□ 1.54
VSX1-206ENST00000444511 FSCN1Q16658 493 aaKnown RBP24.69■■□□□ 1.54
VSX1-206ENST00000444511 CCDC178Q5BJE1 867 aa24.69■■□□□ 1.54
VSX1-206ENST00000444511 GPATCH4Q5T3I0 446 aaKnown RBP24.69■■□□□ 1.54
VSX1-206ENST00000444511 TAPT1Q6NXT6 567 aa24.69■■□□□ 1.54
VSX1-206ENST00000444511 DGKHQ86XP1 1220 aa24.69■■□□□ 1.54
VSX1-206ENST00000444511 MORC4Q8TE76 937 aa24.69■■□□□ 1.54
VSX1-206ENST00000444511 TBX21Q9UL17 535 aa24.69■■□□□ 1.54
VSX1-206ENST00000444511 TLR3O15455 904 aaKnown RBP24.68■■□□□ 1.54
VSX1-206ENST00000444511 ZEB2O60315 1214 aa24.68■■□□□ 1.54
VSX1-206ENST00000444511 CABYRO75952 493 aa24.68■■□□□ 1.54
VSX1-206ENST00000444511 TIMP1P01033 207 aa24.68■■□□□ 1.54
VSX1-206ENST00000444511 ALDH5A1P51649 535 aaPredicted RBP24.68■■□□□ 1.54
VSX1-206ENST00000444511 SMAD3P84022 425 aaKnown RBP24.68■■□□□ 1.54
VSX1-206ENST00000444511 CXCL17Q6UXB2 119 aa24.68■■□□□ 1.54
VSX1-206ENST00000444511 KIAA1211Q6ZU35 1233 aa24.68■■□□□ 1.54
VSX1-206ENST00000444511 DSCC1Q9BVC3 393 aa24.68■■□□□ 1.54
VSX1-206ENST00000444511 WDR19Q8NEZ3 1342 aa24.67■■□□□ 1.54
VSX1-206ENST00000444511 GOLGA8HP0CJ92 632 aa24.67■■□□□ 1.54
VSX1-206ENST00000444511 CALML3P27482 149 aa24.67■■□□□ 1.54
VSX1-206ENST00000444511 IMMTQ16891 758 aaKnown RBP24.67■■□□□ 1.54
VSX1-206ENST00000444511 SLC30A10Q6XR72 485 aa24.67■■□□□ 1.54
VSX1-206ENST00000444511 RNF207Q6ZRF8 634 aa24.67■■□□□ 1.54
VSX1-206ENST00000444511 CLEC4DQ8WXI8 215 aa24.67■■□□□ 1.54
VSX1-206ENST00000444511 KAT14Q9H8E8 782 aa24.67■■□□□ 1.54
VSX1-206ENST00000444511 CTNNA3Q9UI47 895 aa24.67■■□□□ 1.54
VSX1-206ENST00000444511 Q9Y3F1 56 aa24.67■■□□□ 1.54
VSX1-206ENST00000444511 LOC102724159A0A0B4J2E5 919 aa24.66■■□□□ 1.54
VSX1-206ENST00000444511 PTGS1P23219 599 aa24.66■■□□□ 1.54
VSX1-206ENST00000444511 PWP2Q15269 919 aaKnown RBP24.66■■□□□ 1.54
VSX1-206ENST00000444511 FAM126BQ8IXS8 530 aa24.66■■□□□ 1.54
VSX1-206ENST00000444511 PNMA1Q8ND90 353 aa24.66■■□□□ 1.54
VSX1-206ENST00000444511 GUCD1Q96NT3 240 aa24.66■■□□□ 1.54
VSX1-206ENST00000444511 SUPT16HQ9Y5B9 1047 aaKnown RBP24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms