RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 NAALADL2Q58DX5 795 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 APOBEC3HQ6NTF7 200 aaKnown RBP11.74□□□□□ -0.53
CPNE1-218ENST00000439806 TMEM139Q8IV31 216 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 ZNF710Q8N1W2 664 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 TC2NQ8N9U0 490 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 ZDHHC15Q96MV8 337 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 GTPBP4Q9BZE4 634 aaKnown RBP11.74□□□□□ -0.53
CPNE1-218ENST00000439806 DHX36Q9H2U1 1008 aaKnown RBP11.74□□□□□ -0.53
CPNE1-218ENST00000439806 EXOC1Q9NV70 894 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 TAB2Q9NYJ8 693 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 ZNF219Q9P2Y4 722 aaPredicted RBP11.74□□□□□ -0.53
CPNE1-218ENST00000439806 ADD3Q9UEY8 706 aaKnown RBP11.74□□□□□ -0.53
CPNE1-218ENST00000439806 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.74□□□□□ -0.536e-6■□□□□ 9.8
CPNE1-218ENST00000439806 PSME4Q14997 1843 aa11.74□□□□□ -0.53
CPNE1-218ENST00000439806 KCNJ18B7U540 433 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 H7C1D1 291 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 PSMA7O14818 248 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 COBLO75128 1261 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 SLU7O95391 586 aaKnown RBP11.73□□□□□ -0.53
CPNE1-218ENST00000439806 CCT6AP40227 531 aaKnown RBP11.73□□□□□ -0.53
CPNE1-218ENST00000439806 PPP1R2P41236 205 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 TECP42680 631 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 TNNI2P48788 182 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 ASIC1P78348 528 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 TRIM14Q14142 442 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 KCNJ12Q14500 433 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 KRT31Q15323 416 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 STRIP1Q5VSL9 837 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 ITIH6Q6UXX5 1313 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 PHLPP2Q6ZVD8 1323 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 APTXQ7Z2E3 356 aaKnown RBP11.73□□□□□ -0.53
CPNE1-218ENST00000439806 POTEDQ86YR6 584 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 CREBRFQ8IUR6 639 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 KIAA0825Q8IV33 1275 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 ZSCAN29Q8IWY8 852 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-218ENST00000439806 ADGRF4Q8IZF3 695 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 PDCL2Q8N4E4 241 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 NOC3LQ8WTT2 800 aaKnown RBP11.73□□□□□ -0.53
CPNE1-218ENST00000439806 ANKRD7Q92527 254 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 CNKSR1Q969H4 720 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 ERO1AQ96HE7 468 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 CDK5RAP3Q96JB5 506 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 PANX2Q96RD6 677 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 MRIQ9BWK5 157 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 NAA15Q9BXJ9 866 aaKnown RBP11.73□□□□□ -0.53
CPNE1-218ENST00000439806 RAB34Q9BZG1 259 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 RIC8AQ9NPQ8 531 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 KBTBD4Q9NVX7 518 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 MAGEC2Q9UBF1 373 aaPredicted RBP11.73□□□□□ -0.53
CPNE1-218ENST00000439806 PPP2R2CQ9Y2T4 447 aa11.73□□□□□ -0.53
CPNE1-218ENST00000439806 KLRC4O43908 158 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 RAD21O60216 631 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 MARCH6O60337 910 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 RHOBTB3O94955 611 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 PBX1P40424 430 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 TXKP42681 527 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 MRPL12P52815 198 aaKnown RBP11.72□□□□□ -0.53
CPNE1-218ENST00000439806 ETF1P62495 437 aaKnown RBP11.72□□□□□ -0.53
CPNE1-218ENST00000439806 TCP10Q12799 353 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 NFIAQ12857 509 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 TTBK2Q6IQ55 1244 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 CNGA4Q8IV77 575 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 REXO1L1PQ8IX06 675 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 ADSSL1Q8N142 457 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 SUPT20HQ8NEM7 779 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 DCAF4Q8WV16 495 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 CPLX3Q8WVH0 158 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 CUL5Q93034 780 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 CCDC51Q96ER9 411 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 TRIM47Q96LD4 638 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 NAP1L4Q99733 375 aaKnown RBP11.72□□□□□ -0.53
CPNE1-218ENST00000439806 VPS16Q9H269 839 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 JMJD4Q9H9V9 463 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 STK17AQ9UEE5 414 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 DNAI1Q9UI46 699 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 MAPK8IP1Q9UQF2 711 aa11.72□□□□□ -0.53
CPNE1-218ENST00000439806 BICDL2A1A5D9 508 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 USP17L10C9JJH3 530 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 ZBTB5O15062 677 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 MFAP3LO75121 409 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 SLC16A2P36021 539 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 PDE4DQ08499 809 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 RBL2Q08999 1139 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 NCBP1Q09161 790 aaKnown RBP11.71□□□□□ -0.53
CPNE1-218ENST00000439806 UBE2SQ16763 222 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 CERKLQ49MI3 558 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-218ENST00000439806 TCP11X2Q5H9J9 407 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 DACT2Q5SW24 774 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 KCTD1Q719H9 257 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 DHTKD1Q96HY7 919 aaPredicted RBP11.71□□□□□ -0.53
CPNE1-218ENST00000439806 C7orf25Q9BPX7 421 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 IDI2Q9BXS1 227 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 GLT8D2Q9H1C3 349 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 THAP9Q9H5L6 903 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 NYAP2Q9P242 653 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 CGNQ9P2M7 1197 aaKnown RBP11.71□□□□□ -0.53
CPNE1-218ENST00000439806 PI4KBQ9UBF8 816 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 LRWD1Q9UFC0 647 aa11.71□□□□□ -0.53
CPNE1-218ENST00000439806 TRIM49BA6NDI0 452 aa11.7□□□□□ -0.54
CPNE1-218ENST00000439806 NPM3O75607 178 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms