RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 KIAA1328Q86T90 577 aa17.22■□□□□ 0.35
APP-208ENST00000439274 HPS3Q969F9 1004 aa17.22■□□□□ 0.35
APP-208ENST00000439274 CCDC102AQ96A19 550 aa17.22■□□□□ 0.35
APP-208ENST00000439274 MKRN1Q9UHC7 482 aaKnown RBP17.22■□□□□ 0.35
APP-208ENST00000439274 FLT1P17948 1338 aa17.22■□□□□ 0.35
APP-208ENST00000439274 EIF3JO75822 258 aaKnown RBP17.22■□□□□ 0.35
APP-208ENST00000439274 TSPY3P0CV98 308 aa17.22■□□□□ 0.35
APP-208ENST00000439274 TSPY8P0CW00 308 aa17.22■□□□□ 0.35
APP-208ENST00000439274 SRGNP10124 158 aa17.22■□□□□ 0.35
APP-208ENST00000439274 FCER1AP12319 257 aa17.22■□□□□ 0.35
APP-208ENST00000439274 CAPN2P17655 700 aa17.22■□□□□ 0.35
APP-208ENST00000439274 TRIM21P19474 475 aaKnown RBP17.22■□□□□ 0.35
APP-208ENST00000439274 TUBB4BP68371 445 aa17.22■□□□□ 0.35
APP-208ENST00000439274 STK4Q13043 487 aa17.22■□□□□ 0.35
APP-208ENST00000439274 TXNRD1Q16881 649 aa17.22■□□□□ 0.35
APP-208ENST00000439274 MEX3CQ5U5Q3 659 aaKnown RBP17.22■□□□□ 0.35
APP-208ENST00000439274 ANKRD40Q6AI12 368 aa17.22■□□□□ 0.35
APP-208ENST00000439274 CCDC148Q8NFR7 591 aa17.22■□□□□ 0.35
APP-208ENST00000439274 TTYH3Q9C0H2 523 aa17.22■□□□□ 0.35
APP-208ENST00000439274 CCSER1Q9C0I3 900 aa17.22■□□□□ 0.35
APP-208ENST00000439274 EXOC1Q9NV70 894 aa17.22■□□□□ 0.35
APP-208ENST00000439274 BARHL2Q9NY43 387 aa17.22■□□□□ 0.35
APP-208ENST00000439274 DUSP10Q9Y6W6 482 aa17.22■□□□□ 0.35
APP-208ENST00000439274 DNM2P50570 870 aa17.21■□□□□ 0.35
APP-208ENST00000439274 PDE4DQ08499 809 aa17.21■□□□□ 0.35
APP-208ENST00000439274 FAM182BQ5T319 152 aa17.21■□□□□ 0.35
APP-208ENST00000439274 CABP7Q86V35 215 aa17.21■□□□□ 0.35
APP-208ENST00000439274 JAKMIP2Q96AA8 810 aa17.21■□□□□ 0.35
APP-208ENST00000439274 SAP30BPQ9UHR5 308 aaKnown RBP17.21■□□□□ 0.35
APP-208ENST00000439274 SAR1BQ9Y6B6 198 aa17.21■□□□□ 0.35
APP-208ENST00000439274 CYP27A1Q02318 531 aa17.21■□□□□ 0.35
APP-208ENST00000439274 TBC1D8BQ0IIM8 1120 aa17.21■□□□□ 0.35
APP-208ENST00000439274 LETM2Q2VYF4 491 aa17.21■□□□□ 0.35
APP-208ENST00000439274 SLC10A5Q5PT55 438 aa17.21■□□□□ 0.35
APP-208ENST00000439274 CNOT6LQ96LI5 555 aaKnown RBP17.21■□□□□ 0.35
APP-208ENST00000439274 PCMTD1Q96MG8 357 aaPredicted RBP17.21■□□□□ 0.35
APP-208ENST00000439274 NLRP3Q96P20 1036 aa17.21■□□□□ 0.35
APP-208ENST00000439274 TMEM47Q9BQJ4 181 aa17.21■□□□□ 0.35
APP-208ENST00000439274 TULP2O00295 520 aa17.2■□□□□ 0.34
APP-208ENST00000439274 CCNT1O60563 726 aaKnown RBP17.2■□□□□ 0.34
APP-208ENST00000439274 ZMYND10O75800 440 aa17.2■□□□□ 0.34
APP-208ENST00000439274 MEA1Q16626 185 aa17.2■□□□□ 0.34
APP-208ENST00000439274 MUM1L1Q5H9M0 696 aa17.2■□□□□ 0.34
APP-208ENST00000439274 GPIHBP1Q8IV16 184 aa17.2■□□□□ 0.34
APP-208ENST00000439274 GBP3Q9H0R5 595 aa17.2■□□□□ 0.34
APP-208ENST00000439274 NHEJ1Q9H9Q4 299 aaPredicted RBP17.2■□□□□ 0.34
APP-208ENST00000439274 PSD3Q9NYI0 1048 aa17.2■□□□□ 0.34
APP-208ENST00000439274 ZNF185O15231 689 aa17.2■□□□□ 0.34
APP-208ENST00000439274 USP14P54578 494 aa17.2■□□□□ 0.34
APP-208ENST00000439274 ASIC1P78348 528 aa17.2■□□□□ 0.34
APP-208ENST00000439274 WDR93Q6P2C0 686 aa17.2■□□□□ 0.34
APP-208ENST00000439274 NBPF5PQ86XG9 351 aaPredicted RBP17.2■□□□□ 0.34
APP-208ENST00000439274 DAGLBQ8NCG7 672 aa17.2■□□□□ 0.34
APP-208ENST00000439274 TGFBRAP1Q8WUH2 860 aa17.2■□□□□ 0.34
APP-208ENST00000439274 ANKS1AQ92625 1134 aa17.2■□□□□ 0.34
APP-208ENST00000439274 P2RX5Q93086 422 aa17.2■□□□□ 0.34
APP-208ENST00000439274 GJD4Q96KN9 370 aaPredicted RBP17.2■□□□□ 0.34
APP-208ENST00000439274 GDAP1L1Q96MZ0 367 aa17.2■□□□□ 0.34
APP-208ENST00000439274 TRIM9Q9C026 710 aa17.2■□□□□ 0.34
APP-208ENST00000439274 ANKRD2Q9GZV1 360 aa17.2■□□□□ 0.34
APP-208ENST00000439274 SBF2Q86WG5 1849 aa17.2■□□□□ 0.34
APP-208ENST00000439274 MTIF2P46199 727 aaKnown RBP17.19■□□□□ 0.34
APP-208ENST00000439274 DHTKD1Q96HY7 919 aaPredicted RBP17.19■□□□□ 0.34
APP-208ENST00000439274 MACROD2A1Z1Q3 448 aa17.19■□□□□ 0.34
APP-208ENST00000439274 GNAQP50148 359 aa17.19■□□□□ 0.34
APP-208ENST00000439274 KRT83P78385 493 aa17.19■□□□□ 0.34
APP-208ENST00000439274 PAPD7Q5XG87 772 aaKnown RBP17.19■□□□□ 0.34
APP-208ENST00000439274 MAPKAPK5Q8IW41 473 aa17.19■□□□□ 0.34
APP-208ENST00000439274 ZNF444Q8N0Y2 327 aaPredicted RBP17.19■□□□□ 0.34
APP-208ENST00000439274 GPR101Q96P66 508 aaPredicted RBP17.19■□□□□ 0.34
APP-208ENST00000439274 TCP11L1Q9NUJ3 509 aa17.19■□□□□ 0.34
APP-208ENST00000439274 PALM3A6NDB9 673 aaPredicted RBP17.18■□□□□ 0.34
APP-208ENST00000439274 KLRF2D3W0D1 207 aa17.18■□□□□ 0.34
APP-208ENST00000439274 MYL1P05976 194 aa17.18■□□□□ 0.34
APP-208ENST00000439274 PLEKP08567 350 aaPredicted RBP17.18■□□□□ 0.34
APP-208ENST00000439274 OR52Z1P0C646 297 aa17.18■□□□□ 0.34
APP-208ENST00000439274 CCNE1P24864 410 aa17.18■□□□□ 0.34
APP-208ENST00000439274 TECP42680 631 aa17.18■□□□□ 0.34
APP-208ENST00000439274 NAPAP54920 295 aa17.18■□□□□ 0.34
APP-208ENST00000439274 MIIPQ5JXC2 388 aa17.18■□□□□ 0.34
APP-208ENST00000439274 GSPT2Q8IYD1 628 aaKnown RBP17.18■□□□□ 0.34
APP-208ENST00000439274 SMARCC1Q92922 1105 aaPredicted RBP17.18■□□□□ 0.34
APP-208ENST00000439274 ZFP91Q96JP5 570 aaPredicted RBP17.18■□□□□ 0.34
APP-208ENST00000439274 NOC4LQ9BVI4 516 aaKnown RBP17.18■□□□□ 0.34
APP-208ENST00000439274 CCDC88AQ3V6T2 1871 aa17.18■□□□□ 0.34
APP-208ENST00000439274 PDE2AO00408 941 aaPredicted RBP17.18■□□□□ 0.34
APP-208ENST00000439274 KRT86O43790 486 aa17.18■□□□□ 0.34
APP-208ENST00000439274 LDHBP07195 334 aaKnown RBP17.18■□□□□ 0.34
APP-208ENST00000439274 CYLC1P35663 651 aaPredicted RBP17.18■□□□□ 0.34
APP-208ENST00000439274 TNNT3P45378 269 aaPredicted RBP17.18■□□□□ 0.34
APP-208ENST00000439274 KRT26Q7Z3Y9 468 aa17.18■□□□□ 0.34
APP-208ENST00000439274 SMCR8Q8TEV9 937 aaPredicted RBP17.18■□□□□ 0.34
APP-208ENST00000439274 SETDB2Q96T68 719 aa17.18■□□□□ 0.34
APP-208ENST00000439274 HINFPQ9BQA5 517 aa17.18■□□□□ 0.34
APP-208ENST00000439274 VAT1LQ9HCJ6 419 aa17.18■□□□□ 0.34
APP-208ENST00000439274 ZNHIT6Q9NWK9 470 aaKnown RBP17.18■□□□□ 0.34
APP-208ENST00000439274 ACTN2P35609 894 aa17.17■□□□□ 0.34
APP-208ENST00000439274 PRPHP41219 470 aa17.17■□□□□ 0.34
APP-208ENST00000439274 HSP90B2PQ58FF3 399 aa17.17■□□□□ 0.34
APP-208ENST00000439274 MSL3Q8N5Y2 521 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 306.5 ms