RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 MYO3BQ8WXR4 1341 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 FANCGO15287 622 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 ONECUT3O60422 494 aaPredicted RBP11.7□□□□□ -0.54
CD44-210ENST00000434472 CCNT1O60563 726 aaKnown RBP11.7□□□□□ -0.54
CD44-210ENST00000434472 CCNE1P24864 410 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 CDC25AP30304 524 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 DNM2P50570 870 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 CLCN6P51797 869 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 LETM2Q2VYF4 491 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 RSRC2Q7L4I2 434 aaKnown RBP11.7□□□□□ -0.54
CD44-210ENST00000434472 CREBRFQ8IUR6 639 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 SP8Q8IXZ3 490 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 REXO1Q8N1G1 1221 aaKnown RBP11.7□□□□□ -0.54
CD44-210ENST00000434472 RETREG2Q8NC44 543 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 LRRN4CLQ8ND94 238 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 CEP95Q96GE4 821 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 RAB34Q9BZG1 259 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 COA1Q9GZY4 146 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 STK17AQ9UEE5 414 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 SWAP70Q9UH65 585 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 MTMR7Q9Y216 660 aa11.7□□□□□ -0.54
CD44-210ENST00000434472 KLRG2A4D1S0 409 aaPredicted RBP11.69□□□□□ -0.54
CD44-210ENST00000434472 C6orf229H3BNL8 230 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 PLCG1P19174 1290 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 KRT9P35527 623 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 ADCY7P51828 1080 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 TMEM266Q2M3C6 531 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 CNNM4Q6P4Q7 775 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 USP17L2Q6R6M4 530 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 OR8K1Q8NGG5 319 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 P2RX5Q93086 422 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 PIGSQ96S52 555 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 NAP1L4Q99733 375 aaKnown RBP11.69□□□□□ -0.54
CD44-210ENST00000434472 LZTFL1Q9NQ48 299 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 PRDM10Q9NQV6 1147 aa11.69□□□□□ -0.54
CD44-210ENST00000434472 LUC7L2Q9Y383 392 aaKnown RBP11.69□□□□□ -0.54
CD44-210ENST00000434472 CTAGE9A4FU28 777 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 PP2D1A8MPX8 630 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 FXR2P51116 673 aaKnown RBP eCLIP11.68□□□□□ -0.54
CD44-210ENST00000434472 PDE4DQ08499 809 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 TXNRD1Q16881 649 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 ZNF569Q5MCW4 686 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 FAM182BQ5T319 152 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 TTI2Q6NXR4 508 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 IRF2BP1Q8IU81 584 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 ZNF507Q8TCN5 953 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 TBCKQ8TEA7 893 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 TRIM9Q9C026 710 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 ZNF446Q9NWS9 450 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 MTMR4Q9NYA4 1195 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 POLLQ9UGP5 575 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 CDC23Q9UJX2 597 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 CAPN11Q9UMQ6 739 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 CDK5RAP2Q96SN8 1893 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 BAZ2BQ9UIF8 2168 aaKnown RBP11.68□□□□□ -0.54
CD44-210ENST00000434472 IGKV6D-41A0A0C4DH26 115 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 PVALEFA0A1B0GWK0 134 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 USP17L5A8MUK1 530 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 PPEF1O14829 653 aaPredicted RBP11.68□□□□□ -0.54
CD44-210ENST00000434472 COBLO75128 1261 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 ZRANB2O95218 330 aaKnown RBP eCLIP11.68□□□□□ -0.54
CD44-210ENST00000434472 FGFR1OPO95684 399 aaKnown RBP11.68□□□□□ -0.54
CD44-210ENST00000434472 SRGNP10124 158 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 PDHBP11177 359 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 ERVK-24P63145 666 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 ASIC1P78348 528 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 PDIA5Q14554 519 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 KIF4BQ2VIQ3 1234 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 TEX35Q5T0J7 233 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 MEX3CQ5U5Q3 659 aaKnown RBP11.68□□□□□ -0.54
CD44-210ENST00000434472 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 CSGALNACT2Q8N6G5 542 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 DNAJC7Q99615 494 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 NAPGQ99747 312 aaPredicted RBP11.68□□□□□ -0.54
CD44-210ENST00000434472 VAT1LQ9HCJ6 419 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 LRRC4BQ9NT99 713 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 ZNHIT6Q9NWK9 470 aaKnown RBP11.68□□□□□ -0.54
CD44-210ENST00000434472 MAPK8IP1Q9UQF2 711 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 DAGLAQ9Y4D2 1042 aa11.68□□□□□ -0.54
CD44-210ENST00000434472 LRRC37AA6NMS7 1700 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 MYH1P12882 1939 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 UBR3Q6ZT12 1888 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 TRIM49BA6NDI0 452 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 SLC26A4O43511 780 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 SNHG28P0DPA3 235 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 GTF2IP78347 998 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 KRT83P78385 493 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 GABPAQ06546 454 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 CALCRLQ16602 461 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 WHAMMP3Q1A5X7 153 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 FKBP15Q5T1M5 1219 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 ZNF662Q6ZS27 426 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 CDK5RAP3Q96JB5 506 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 MTMR9Q96QG7 549 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 PLIN2Q99541 437 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 DUSP9Q99956 384 aaKnown RBP11.67□□□□□ -0.54
CD44-210ENST00000434472 TUBGCP2Q9BSJ2 902 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 GLT8D2Q9H1C3 349 aa11.67□□□□□ -0.54
CD44-210ENST00000434472 HAUS4Q9H6D7 363 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms