RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ZNF214Q9UL59 606 aaPredicted RBP6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 RIPK3Q9Y572 518 aa6.82□□□□□ -1.32
HMGB1P20-201ENST00000402555 ZMYM6O95789 1325 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 LAMA4Q16363 1823 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 ZNF236Q9UL36 1845 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 HIP1O00291 1037 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 STRNO43815 780 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 SLC25A27O95847 323 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 HOXC6P09630 235 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 FCER1AP12319 257 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 BMP3P12645 472 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 TAL1P17542 331 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 CNGA1P29973 690 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 SLC1A4P43007 532 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 MFAP1P55081 439 aaKnown RBP6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 IKQ13123 557 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 TJAP1Q5JTD0 557 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 PRAMEF19Q5SWL8 479 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 AKNAD1Q5T1N1 836 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 MFSD14CQ5VZR4 134 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 ANO1Q5XXA6 986 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 PADI6Q6TGC4 694 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 MFSD6Q6ZSS7 791 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 TICAM2Q86XR7 235 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 TRMT44Q8IYL2 757 aaKnown RBP6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 PRPF38AQ8NAV1 312 aaKnown RBP6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 DPF3Q92784 378 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 PAWRQ96IZ0 340 aaKnown RBP6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 MMP19Q99542 508 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 ZKSCAN3Q9BRR0 538 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 TEX13BQ9BXU2 312 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 FEM1BQ9UK73 627 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 CTDP1Q9Y5B0 961 aaPredicted RBP6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 SMCHD1A6NHR9 2005 aa6.81□□□□□ -1.32
HMGB1P20-201ENST00000402555 ALPK3Q96L96 1907 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 B4E1Z4 1266 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 H0YGN5 161 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 ZNF213O14771 459 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 ZBED4O75132 1171 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 KDM4AO75164 1064 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 IGHA2P01877 340 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 CHMLP26374 656 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 SLC16A2P36021 539 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 NOVP48745 357 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 RANBP2P49792 3224 aaKnown RBP6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 PTH1RQ03431 593 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 KCTD2Q14681 263 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 CCDC96Q2M329 555 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 TTBK2Q6IQ55 1244 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 RCSD1Q6JBY9 416 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 CCDC174Q6PII3 467 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 STAG1Q8WVM7 1258 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 GMCL1Q96IK5 515 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 MAML3Q96JK9 1138 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 AGBL1Q96MI9 1066 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 TMEM47Q9BQJ4 181 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 DSCC1Q9BVC3 393 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 SLC38A10Q9HBR0 1119 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 GPCPD1Q9NPB8 672 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 HOMER2Q9NSB8 354 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 PLXNA1Q9UIW2 1896 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 OGDHLQ9ULD0 1010 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 SYNPO2Q9UMS6 1093 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 FRMPD3Q5JV73 1810 aa6.8□□□□□ -1.32
HMGB1P20-201ENST00000402555 FRMPD2Q68DX3 1309 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 MCM3APO60318 1980 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 TOP1P11387 765 aaKnown RBP6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 CYBAP13498 195 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 STAT2P52630 851 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 IMMTQ16891 758 aaKnown RBP6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 ZNF792Q3KQV3 632 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 OLFML2BQ68BL8 750 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 FAM160B2Q86V87 743 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 ABRAQ8N0Z2 381 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 CHURC1Q8WUH1 139 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 ESR2Q92731 530 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 IRX2Q9BZI1 471 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 RNF41Q9H4P4 317 aaPredicted RBP6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 TCP11L1Q9NUJ3 509 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 DDX20Q9UHI6 824 aaKnown RBP6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 PRR12Q9ULL5 1215 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 TAF6LQ9Y6J9 622 aa6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 DDX49Q9Y6V7 483 aaKnown RBP6.79□□□□□ -1.32
HMGB1P20-201ENST00000402555 PFASO15067 1338 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 ZNF536O15090 1300 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 RAD50Q92878 1312 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 ATP2A1O14983 1001 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 SGSM2O43147 1006 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 GOLGA8HP0CJ92 632 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 PCP11498 1178 aaKnown RBP6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 ALAS1P13196 640 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 COPB2P35606 906 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 MUM1L1Q5H9M0 696 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 SYDE2Q5VT97 1194 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 CYB5R4Q7L1T6 521 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 NECAB2Q7Z6G3 386 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 ANKRD35Q8N283 1001 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 ANKLE1Q8NAG6 615 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 DCAF4Q8WV16 495 aa6.78□□□□□ -1.32
HMGB1P20-201ENST00000402555 LENG1Q96BZ8 264 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms