RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 LCMT1Q9UIC8 334 aa22.8■■□□□ 1.24
CLN5-201ENST00000377453 LAMB2P55268 1798 aa22.8■■□□□ 1.24
CLN5-201ENST00000377453 PDE2AO00408 941 aaPredicted RBP22.79■■□□□ 1.24
CLN5-201ENST00000377453 RHOBTB3O94955 611 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 NAPAP54920 295 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 RAD51AP2Q09MP3 1159 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 NFIXQ14938 502 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 FOXR1Q6PIV2 292 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 TXLNBQ8N3L3 684 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 JAKMIP2Q96AA8 810 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 SLC39A2Q9NP94 309 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 BARHL2Q9NY43 387 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 ANKIB1Q9P2G1 1089 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 EPHB6O15197 1021 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 ERLIN1O75477 346 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 MTIF2P46199 727 aaKnown RBP22.79■■□□□ 1.24
CLN5-201ENST00000377453 MAPK8IP2Q13387 824 aaPredicted RBP22.79■■□□□ 1.24
CLN5-201ENST00000377453 DGKHQ86XP1 1220 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 RIN2Q8WYP3 895 aaPredicted RBP22.79■■□□□ 1.24
CLN5-201ENST00000377453 C8orf37Q96NL8 207 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 SETDB2Q96T68 719 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 PYM1Q9BRP8 204 aaKnown RBP22.79■■□□□ 1.24
CLN5-201ENST00000377453 UBA5Q9GZZ9 404 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 NHEJ1Q9H9Q4 299 aaPredicted RBP22.79■■□□□ 1.24
CLN5-201ENST00000377453 KIAA1551Q9HCM1 1747 aa22.79■■□□□ 1.24
CLN5-201ENST00000377453 KLRF2D3W0D1 207 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 TNNT3P45378 269 aaPredicted RBP22.78■■□□□ 1.24
CLN5-201ENST00000377453 FAM193AP78312 1265 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 FAM98CQ17RN3 349 aaKnown RBP22.78■■□□□ 1.24
CLN5-201ENST00000377453 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.78■■□□□ 1.24
CLN5-201ENST00000377453 EXOC1Q9NV70 894 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 BIN2Q9UBW5 565 aaPredicted RBP22.78■■□□□ 1.24
CLN5-201ENST00000377453 LDHBP07195 334 aaKnown RBP22.78■■□□□ 1.24
CLN5-201ENST00000377453 SRGNP10124 158 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 ZNF444Q8N0Y2 327 aaPredicted RBP22.78■■□□□ 1.24
CLN5-201ENST00000377453 PSMB7Q99436 277 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 TRIM9Q9C026 710 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 THAP9Q9H5L6 903 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 ZNF263O14978 683 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 MYBL2P10244 700 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 TSR1Q2NL82 804 aaKnown RBP22.78■■□□□ 1.24
CLN5-201ENST00000377453 P2RX5Q93086 422 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 TTYH3Q9C0H2 523 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 PLEKHA4Q9H4M7 779 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 SMARCAL1Q9NZC9 954 aa22.78■■□□□ 1.24
CLN5-201ENST00000377453 AHDC1Q5TGY3 1603 aaPredicted RBP22.77■■□□□ 1.24
CLN5-201ENST00000377453 POTEB2H3BUK9 544 aa22.77■■□□□ 1.24
CLN5-201ENST00000377453 RASA1P20936 1047 aa22.77■■□□□ 1.24
CLN5-201ENST00000377453 EEF1GP26641 437 aaKnown RBP22.77■■□□□ 1.24
CLN5-201ENST00000377453 STIM1Q13586 685 aa22.77■■□□□ 1.24
CLN5-201ENST00000377453 KCNB1Q14721 858 aa22.77■■□□□ 1.24
CLN5-201ENST00000377453 POTEDQ86YR6 584 aa22.77■■□□□ 1.24
CLN5-201ENST00000377453 TM4SF1P30408 202 aa22.77■■□□□ 1.23
CLN5-201ENST00000377453 C2orf54Q08AI8 447 aa22.77■■□□□ 1.23
CLN5-201ENST00000377453 GPS2Q13227 327 aa22.77■■□□□ 1.23
CLN5-201ENST00000377453 MIIPQ5JXC2 388 aa22.77■■□□□ 1.23
CLN5-201ENST00000377453 DYMQ7RTS9 669 aa22.77■■□□□ 1.23
CLN5-201ENST00000377453 KIAA0895Q8NCT3 520 aa22.77■■□□□ 1.23
CLN5-201ENST00000377453 GJA10Q969M2 543 aa22.77■■□□□ 1.23
CLN5-201ENST00000377453 NOC4LQ9BVI4 516 aaKnown RBP22.77■■□□□ 1.23
CLN5-201ENST00000377453 CCSER1Q9C0I3 900 aa22.77■■□□□ 1.23
CLN5-201ENST00000377453 HAUS4Q9H6D7 363 aa22.77■■□□□ 1.23
CLN5-201ENST00000377453 SH3GLB2Q9NR46 395 aa22.77■■□□□ 1.23
CLN5-201ENST00000377453 SAR1BQ9Y6B6 198 aa22.77■■□□□ 1.23
CLN5-201ENST00000377453 SMCO2A6NFE2 343 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 UBAP1LF5GYI3 381 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 PSMD14O00487 310 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 GNPATO15228 680 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 OR52Z1P0C646 297 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 GLIS3Q8NEA6 775 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 MMTAG2Q9BU76 263 aaKnown RBP22.76■■□□□ 1.23
CLN5-201ENST00000377453 MYO1AQ9UBC5 1043 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 A0A1W2PQC6 194 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 TXKP42681 527 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 SLC10A5Q5PT55 438 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 CLEC10AQ8IUN9 316 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 MLXIPQ9HAP2 919 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 LRWD1Q9UFC0 647 aa22.76■■□□□ 1.23
CLN5-201ENST00000377453 FRMPD2Q68DX3 1309 aaPredicted RBP22.75■■□□□ 1.23
CLN5-201ENST00000377453 LAMB1P07942 1786 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 PALM3A6NDB9 673 aaPredicted RBP22.75■■□□□ 1.23
CLN5-201ENST00000377453 DNM2P50570 870 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 USP14P54578 494 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 EZH2Q15910 746 aaKnown RBP22.75■■□□□ 1.23
CLN5-201ENST00000377453 CCDC148Q8NFR7 591 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 EXOC4Q96A65 974 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 PIGSQ96S52 555 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 SEMA6BQ9H3T3 888 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 FAM207AQ9NSI2 230 aaPredicted RBP22.75■■□□□ 1.23
CLN5-201ENST00000377453 CASZ1Q86V15 1759 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 COL22A1Q8NFW1 1626 aaPredicted RBP22.75■■□□□ 1.23
CLN5-201ENST00000377453 CCDC155Q8N6L0 562 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 CAGE1Q8TC20 777 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 TBCKQ8TEA7 893 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 EHD2Q9NZN4 543 aa22.75■■□□□ 1.23
CLN5-201ENST00000377453 CCNE1P24864 410 aa22.74■■□□□ 1.23
CLN5-201ENST00000377453 SKIDA1Q1XH10 827 aa22.74■■□□□ 1.23
CLN5-201ENST00000377453 JADE2Q9NQC1 790 aa22.74■■□□□ 1.23
CLN5-201ENST00000377453 TCP11L1Q9NUJ3 509 aa22.74■■□□□ 1.23
CLN5-201ENST00000377453 EIF6P56537 245 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms