RNA–Protein interactions for RNA: ENST00000376048.9

PRDM2-204, Transcript of PR/SET domain 2, humanhuman

TSL 2 BASIC

Gene PRDM2, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-204ENST00000376048 EFCC1Q9HA90 598 aa13.35□□□□□ -0.27
PRDM2-204ENST00000376048 STK24Q9Y6E0 443 aa13.35□□□□□ -0.27
PRDM2-204ENST00000376048 UBAP1LF5GYI3 381 aa13.35□□□□□ -0.27
PRDM2-204ENST00000376048 ZPR1O75312 459 aa13.35□□□□□ -0.27
PRDM2-204ENST00000376048 STIM1Q13586 685 aa13.35□□□□□ -0.27
PRDM2-204ENST00000376048 ANKRD20A12PQ8NF67 263 aa13.35□□□□□ -0.27
PRDM2-204ENST00000376048 CAGE1Q8TC20 777 aa13.35□□□□□ -0.27
PRDM2-204ENST00000376048 CPVLQ9H3G5 476 aa13.35□□□□□ -0.27
PRDM2-204ENST00000376048 RNF41Q9H4P4 317 aaPredicted RBP13.35□□□□□ -0.27
PRDM2-204ENST00000376048 HAUS4Q9H6D7 363 aa13.35□□□□□ -0.27
PRDM2-204ENST00000376048 JADE2Q9NQC1 790 aa13.35□□□□□ -0.27
PRDM2-204ENST00000376048 DOCK2Q92608 1830 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 RASSF10A6NK89 507 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 TOM1O60784 492 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 PLEKP08567 350 aaPredicted RBP13.34□□□□□ -0.27
PRDM2-204ENST00000376048 CHRM1P11229 460 aaPredicted RBP13.34□□□□□ -0.27
PRDM2-204ENST00000376048 AARSP49588 968 aaKnown RBP eCLIP13.34□□□□□ -0.273e-6■■■■■ 61.8
PRDM2-204ENST00000376048 SF3B3Q15393 1217 aaKnown RBP13.34□□□□□ -0.27
PRDM2-204ENST00000376048 DNAJC21Q5F1R6 531 aaKnown RBP13.34□□□□□ -0.27
PRDM2-204ENST00000376048 BARGINQ6ZT62 677 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 CATIPQ7Z7H3 387 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 GOLGA6L1Q8N7Z2 621 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 LRRC15Q8TF66 581 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 SMARCC1Q92922 1105 aaPredicted RBP13.34□□□□□ -0.27
PRDM2-204ENST00000376048 NLRP3Q96P20 1036 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 KAT14Q9H8E8 782 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 EHD2Q9NZN4 543 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 PHLPP1O60346 1717 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 FAM205AQ6ZU69 1335 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 ERCC3P19447 782 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 MATR3P43243 847 aaKnown RBP eCLIP13.34□□□□□ -0.273e-6■■■□□ 16.2
PRDM2-204ENST00000376048 CORO7P57737 925 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 NLRP5P59047 1200 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 SLC7A5Q01650 507 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 NAALADL2Q58DX5 795 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 GPKOWQ92917 476 aaPredicted RBP eCLIP13.34□□□□□ -0.27
PRDM2-204ENST00000376048 DNAJC7Q99615 494 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 ANKIB1Q9P2G1 1089 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 BCORQ6W2J9 1755 aa13.34□□□□□ -0.27
PRDM2-204ENST00000376048 CNTNAP5Q8WYK1 1306 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 GNAT2P19087 354 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 HIBADHP31937 336 aaKnown RBP13.33□□□□□ -0.28
PRDM2-204ENST00000376048 STAT6P42226 847 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 SPAG1Q07617 926 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 UBE4AQ14139 1066 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 TTC31Q49AM3 519 aaPredicted RBP13.33□□□□□ -0.28
PRDM2-204ENST00000376048 PAPD7Q5XG87 772 aaKnown RBP13.33□□□□□ -0.28
PRDM2-204ENST00000376048 ZNF507Q8TCN5 953 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 SECISBP2LQ93073 1101 aaKnown RBP13.33□□□□□ -0.28
PRDM2-204ENST00000376048 ACBD3Q9H3P7 528 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 MKRN1Q9UHC7 482 aaKnown RBP13.33□□□□□ -0.28
PRDM2-204ENST00000376048 DMGDHQ9UI17 866 aaKnown RBP13.33□□□□□ -0.28
PRDM2-204ENST00000376048 LGALS16A8MUM7 142 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 PPFIA4O75335 1185 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 IDEP14735 1019 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 TRIM21P19474 475 aaKnown RBP13.33□□□□□ -0.28
PRDM2-204ENST00000376048 CXCR5P32302 372 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 TUBB4BP68371 445 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 CLEC4GQ6UXB4 293 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 TMTC3Q6ZXV5 915 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 ADSSL1Q8N142 457 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 RASSF8Q8NHQ8 419 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 TRIM47Q96LD4 638 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 BRMS1Q9HCU9 246 aa13.33□□□□□ -0.28
PRDM2-204ENST00000376048 DCP1AQ9NPI6 582 aaPredicted RBP13.33□□□□□ -0.28
PRDM2-204ENST00000376048 ZNF263O14978 683 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 TM4SF1P30408 202 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 CCT5P48643 541 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 TRIM14Q14142 442 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 CCNI2Q6ZMN8 369 aaPredicted RBP13.32□□□□□ -0.28
PRDM2-204ENST00000376048 CRACR2AQ9BSW2 395 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 VIPAS39Q9H9C1 493 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 NHEJ1Q9H9Q4 299 aaPredicted RBP13.32□□□□□ -0.28
PRDM2-204ENST00000376048 SAP30BPQ9UHR5 308 aaKnown RBP13.32□□□□□ -0.28
PRDM2-204ENST00000376048 CAPN11Q9UMQ6 739 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 RTL9Q8NET4 1388 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 FAM196AQ6ZSG2 479 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 FBXO33Q7Z6M2 555 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 HPS3Q969F9 1004 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 TMEM60Q9H2L4 133 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 LRRC4BQ9NT99 713 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 MCM9Q9NXL9 1143 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 CAPN6Q9Y6Q1 641 aa13.32□□□□□ -0.28
PRDM2-204ENST00000376048 H7C1D1 291 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 TMCO4Q5TGY1 634 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 PCMTD1Q96MG8 357 aaPredicted RBP13.31□□□□□ -0.28
PRDM2-204ENST00000376048 LRRC1Q9BTT6 524 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 LRWD1Q9UFC0 647 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 NARFQ9UHQ1 456 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 USP21Q9UK80 565 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 NRAPQ86VF7 1730 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 USP17L3A6NCW0 530 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 USP17L4A6NCW7 530 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 TSR1Q2NL82 804 aaKnown RBP13.31□□□□□ -0.28
PRDM2-204ENST00000376048 SND1Q7KZF4 910 aaKnown RBP eCLIP13.31□□□□□ -0.28
PRDM2-204ENST00000376048 USP17L1Q7RTZ2 530 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 C4orf32Q8N8J7 132 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 MLXIPQ9HAP2 919 aa13.31□□□□□ -0.28
PRDM2-204ENST00000376048 RTCBQ9Y3I0 505 aaKnown RBP13.31□□□□□ -0.28
PRDM2-204ENST00000376048 JRKLQ9Y4A0 524 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms