RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 MXD3Q9BW11 206 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 LRRC27Q9C0I9 530 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 SWAP70Q9UH65 585 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 BCS1LQ9Y276 419 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 ADAMTSL1Q8N6G6 1762 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 FLT1P17948 1338 aa13.76□□□□□ -0.21
UBR4-203ENST00000375225 LRRC10BA6NIK2 292 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 URI1O94763 535 aaPredicted RBP13.75□□□□□ -0.21
UBR4-203ENST00000375225 OR52Z1P0C646 297 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 EEF1GP26641 437 aaKnown RBP13.75□□□□□ -0.21
UBR4-203ENST00000375225 CRKP46108 304 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 SCNN1DP51172 638 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 STX17P56962 302 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 TMEM266Q2M3C6 531 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 HSP90AA4PQ58FG1 418 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 PPP1R18Q6NYC8 613 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 NEK8Q86SG6 692 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 STAG2Q8N3U4 1231 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 CALML4Q96GE6 196 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 NAP1L4Q99733 375 aaKnown RBP13.75□□□□□ -0.21
UBR4-203ENST00000375225 KCNQ5Q9NR82 932 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 SAP30BPQ9UHR5 308 aaKnown RBP13.75□□□□□ -0.21
UBR4-203ENST00000375225 PLIN4Q96Q06 1357 aa13.75□□□□□ -0.21
UBR4-203ENST00000375225 EFCAB8A8MWE9 144 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 KIF5CO60282 957 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 MFAP3LO75121 409 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 CD44P16070 742 aaKnown RBP13.74□□□□□ -0.21
UBR4-203ENST00000375225 PBX1P40424 430 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 ADKP55263 362 aaKnown RBP13.74□□□□□ -0.21
UBR4-203ENST00000375225 RHBDL3P58872 404 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 GNG11P61952 73 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 KIAA0825Q8IV33 1275 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 JDP2Q8WYK2 163 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 IQCDQ96DY2 449 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 DHTKD1Q96HY7 919 aaPredicted RBP13.74□□□□□ -0.21
UBR4-203ENST00000375225 THAP9Q9H5L6 903 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 SERPINA10Q9UK55 444 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 ZNRF3Q9ULT6 936 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 SMCO2A6NFE2 343 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 YDJCA8MPS7 323 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 KCNJ18B7U540 433 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 WNT7AO00755 349 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 RBM5P52756 815 aaKnown RBP eCLIP13.74□□□□□ -0.21
UBR4-203ENST00000375225 COPB1P53618 953 aaKnown RBP13.74□□□□□ -0.21
UBR4-203ENST00000375225 KCNJ12Q14500 433 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 INF2Q27J81 1249 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 TCP11X2Q5H9J9 407 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 TRIM65Q6PJ69 517 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 CYP26C1Q6V0L0 522 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 CABP7Q86V35 215 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 ZDHHC15Q96MV8 337 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 GLT8D2Q9H1C3 349 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 BLZF1Q9H2G9 400 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 MYO1AQ9UBC5 1043 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 HDAC9Q9UKV0 1011 aa13.74□□□□□ -0.21
UBR4-203ENST00000375225 LTBP3Q9NS15 1303 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 RHOBTB3O94955 611 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 FGFR1OPO95684 399 aaKnown RBP13.73□□□□□ -0.21
UBR4-203ENST00000375225 HLA-DOAP06340 250 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 NOVP48745 357 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 RBL2Q08999 1139 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 KARSQ15046 597 aaKnown RBP13.73□□□□□ -0.21
UBR4-203ENST00000375225 KRT31Q15323 416 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 ELF2Q15723 593 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 IL17AQ16552 155 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 SLC4A8Q2Y0W8 1093 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 NOM1Q5C9Z4 860 aaKnown RBP13.73□□□□□ -0.21
UBR4-203ENST00000375225 JAKMIP3Q5VZ66 844 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 CNNM4Q6P4Q7 775 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 RSBN1LQ6PCB5 846 aaPredicted RBP13.73□□□□□ -0.21
UBR4-203ENST00000375225 REXO1Q8N1G1 1221 aaKnown RBP13.73□□□□□ -0.21
UBR4-203ENST00000375225 NUP58Q9BVL2 599 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 EXOC1Q9NV70 894 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 USP40Q9NVE5 1235 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 KBTBD4Q9NVX7 518 aa13.73□□□□□ -0.21
UBR4-203ENST00000375225 COL4A5P29400 1685 aa13.72□□□□□ -0.21
UBR4-203ENST00000375225 A0A1W2PQC6 194 aa13.72□□□□□ -0.21
UBR4-203ENST00000375225 CCNT1O60563 726 aaKnown RBP13.72□□□□□ -0.21
UBR4-203ENST00000375225 VIL1P09327 827 aaKnown RBP13.72□□□□□ -0.21
UBR4-203ENST00000375225 FECHP22830 423 aa13.72□□□□□ -0.21
UBR4-203ENST00000375225 EVX2Q03828 476 aa13.72□□□□□ -0.21
UBR4-203ENST00000375225 BMS1Q14692 1282 aaKnown RBP13.72□□□□□ -0.21
UBR4-203ENST00000375225 APTXQ7Z2E3 356 aaKnown RBP13.72□□□□□ -0.21
UBR4-203ENST00000375225 ADSSL1Q8N142 457 aa13.72□□□□□ -0.21
UBR4-203ENST00000375225 MED15Q96RN5 788 aa13.72□□□□□ -0.21
UBR4-203ENST00000375225 NUP88Q99567 741 aaPredicted RBP13.72□□□□□ -0.21
UBR4-203ENST00000375225 STK17AQ9UEE5 414 aa13.72□□□□□ -0.21
UBR4-203ENST00000375225 DDX41Q9UJV9 622 aaKnown RBP13.72□□□□□ -0.21
UBR4-203ENST00000375225 MYH8P13535 1937 aa13.72□□□□□ -0.21
UBR4-203ENST00000375225 POTEB2H3BUK9 544 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 NFKBIEO00221 500 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 PSMD14O00487 310 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 CYTH3O43739 400 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 RAD17O75943 681 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 ADCY7P51828 1080 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 PICALMQ13492 652 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 LETM2Q2VYF4 491 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 COBLL1Q53SF7 1204 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 RASGRP2Q7LDG7 609 aa13.71□□□□□ -0.21
UBR4-203ENST00000375225 SMYD4Q8IYR2 804 aaPredicted RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms