RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 RBM6P78332 1123 aaKnown RBP10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 RASSF7Q02833 373 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 PPP1R7Q15435 360 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 SPATA1Q5VX52 437 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 CPLX4Q7Z7G2 160 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 PLCD3Q8N3E9 789 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 ZCCHC17Q9NP64 241 aaKnown RBP10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 EPN1Q9Y6I3 576 aaPredicted RBP10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 PLEKHG2Q9H7P9 1386 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 SERPINB2P05120 415 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 IFNAR1P17181 557 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 CERKLQ49MI3 558 aaPredicted RBP10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 DPF2Q92785 391 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 TUBGCP2Q9BSJ2 902 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 TAOK3Q9H2K8 898 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 DPH5Q9H2P9 285 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 SPATA31A6Q5VVP1 1343 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 TEX33O43247 280 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 COPB1P53618 953 aaKnown RBP10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 EHHADHQ08426 723 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 ADCY1Q08828 1119 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 DLGAP5Q15398 846 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 ASIC2Q16515 512 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 SLFN13Q68D06 897 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 SH2D3AQ9BRG2 576 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 SAR1BQ9Y6B6 198 aa10.09□□□□□ -0.79
SMARCA1-202ENST00000371122 A0A1W2PQ27 194 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 A0A1W2PQ64 194 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 A0A1W2PQD8 194 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 FMNL1O95466 1100 aaPredicted RBP10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 RPL13P26373 211 aaKnown RBP10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 ICA1Q05084 483 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 COL9A3Q14050 684 aaPredicted RBP10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 SH3RF3Q8TEJ3 882 aaPredicted RBP10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 ADAMTS7Q9UKP4 1686 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 KCNK3O14649 394 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 CUL4BQ13620 913 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 MTF1Q14872 753 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 VTI1AQ96AJ9 217 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 PKD1L3Q7Z443 1732 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 EBAG9O00559 213 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 GAS7O60861 476 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 SRGAP2O75044 1071 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 LRRN2O75325 713 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 DLATP10515 647 aaKnown RBP10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 MGARPQ8TDB4 240 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 KAZALD1Q96I82 304 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 CNOT6LQ96LI5 555 aaKnown RBP10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 FNBP1Q96RU3 617 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 PDE11AQ9HCR9 933 aa10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 PARP4Q9UKK3 1724 aaKnown RBP10.08□□□□□ -0.8
SMARCA1-202ENST00000371122 POTEMA6NI47 508 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 GCOM1H8Y6P7 765 aaPredicted RBP10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 NDUFAB1O14561 156 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 MYZAPP0CAP1 466 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 PPP2R5DQ14738 602 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 IFI16Q16666 785 aaKnown RBP10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 TBC1D9BQ66K14 1250 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 MYOCDQ8IZQ8 938 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 FAM76AQ8TAV0 307 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 DDX25Q9UHL0 483 aaKnown RBP10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 UBN2Q6ZU65 1347 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 CD19P15391 556 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 SLC7A5Q01650 507 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 ADAM9Q13443 819 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 FAM26FQ5R3K3 315 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 EEPD1Q7L9B9 569 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 ENAHQ8N8S7 591 aaPredicted RBP10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 NOX5Q96PH1 765 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 PAGR1Q9BTK6 254 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 PCIF1Q9H4Z3 704 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.07□□□□□ -0.81e-18■■■□□ 18
SMARCA1-202ENST00000371122 GPR108Q9NPR9 543 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 MINPP1Q9UNW1 487 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 RGPD2P0DJD1 1756 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 USP17L15C9J2P7 530 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 USP17L13C9JLJ4 530 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 USP17L11C9JVI0 530 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 USP17L18D6R9N7 530 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 USP17L22D6RA61 530 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 USP17L17D6RBQ6 530 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 USP17L19D6RCP7 530 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 USP17L20D6RJB6 530 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 VIMP08670 466 aaKnown RBP10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 PLCG1P19174 1290 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 ACTN2P35609 894 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 GRIN1Q05586 938 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 USP17L24Q0WX57 530 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 SFMBT2Q5VUG0 894 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 USP17L6PQ6QN14 398 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 STAG2Q8N3U4 1231 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 IMPG2Q9BZV3 1241 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 PANK4Q9NVE7 773 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 GOLGA6CA6NDK9 693 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 GSG1L2A8MUP6 293 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 GOLGA6DP0CG33 693 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 HAUS3Q68CZ6 603 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 PEX26Q7Z412 305 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 CCDC155Q8N6L0 562 aa10.07□□□□□ -0.8
SMARCA1-202ENST00000371122 OTUD6BQ8N6M0 293 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms