RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 TRAF5O00463 557 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 RIMBP2O15034 1052 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 ZBED6P86452 979 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 TERF2Q15554 542 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 SH3RF1Q7Z6J0 888 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.19□□□□□ -0.62
HMGCR-201ENST00000287936 SWAP70Q9UH65 585 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 SEC31AO94979 1220 aaKnown RBP11.19□□□□□ -0.62
HMGCR-201ENST00000287936 LONRF2Q1L5Z9 754 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 DYMQ7RTS9 669 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 STAG2Q8N3U4 1231 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 NEDD1Q8NHV4 660 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 PIGSQ96S52 555 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 H2AFXP16104 143 aaPredicted RBP11.18□□□□□ -0.62
HMGCR-201ENST00000287936 HAUS3Q68CZ6 603 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 CC2D1AQ6P1N0 951 aaPredicted RBP11.18□□□□□ -0.62
HMGCR-201ENST00000287936 ADSSL1Q8N142 457 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 LARP4BQ92615 738 aaKnown RBP11.18□□□□□ -0.62
HMGCR-201ENST00000287936 VPS18Q9P253 973 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 TBCAO75347 108 aaKnown RBP11.18□□□□□ -0.62
HMGCR-201ENST00000287936 GNA14O95837 355 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 TRIM58Q8NG06 486 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 ARHGEF1Q92888 912 aaKnown RBP11.18□□□□□ -0.62
HMGCR-201ENST00000287936 CTDP1Q9Y5B0 961 aaPredicted RBP11.18□□□□□ -0.62
HMGCR-201ENST00000287936 IVLP07476 585 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 FGRP09769 529 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 CD44P16070 742 aaKnown RBP11.18□□□□□ -0.62
HMGCR-201ENST00000287936 BMP6P22004 513 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 CDR1P51861 262 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 EIF6P56537 245 aaKnown RBP11.18□□□□□ -0.62
HMGCR-201ENST00000287936 GTF2IP78347 998 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 MTF1Q14872 753 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 MCTP2Q6DN12 878 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 FAM196AQ6ZSG2 479 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 CEP89Q96ST8 783 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 UBA5Q9GZZ9 404 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 FRMPD2Q68DX3 1309 aaPredicted RBP11.18□□□□□ -0.62
HMGCR-201ENST00000287936 ZSCAN20P17040 1043 aaPredicted RBP11.18□□□□□ -0.62
HMGCR-201ENST00000287936 PPP4CP60510 307 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 TRIM65Q6PJ69 517 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 USP17L2Q6R6M4 530 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 STXBP4Q6ZWJ1 553 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 MYOCDQ8IZQ8 938 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 MRPL44Q9H9J2 332 aaKnown RBP11.18□□□□□ -0.62
HMGCR-201ENST00000287936 CD209Q9NNX6 404 aa11.18□□□□□ -0.62
HMGCR-201ENST00000287936 GCFC2P16383 781 aaKnown RBP11.17□□□□□ -0.62
HMGCR-201ENST00000287936 ADRA2BP18089 450 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 MAGEA1P43355 309 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 CCDC93Q567U6 631 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 GPATCH4Q5T3I0 446 aaKnown RBP11.17□□□□□ -0.62
HMGCR-201ENST00000287936 PDXDC2PQ6P474 469 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 DPP8Q6V1X1 898 aaPredicted RBP11.17□□□□□ -0.62
HMGCR-201ENST00000287936 RAD9BQ6WBX8 426 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 DRC1Q96MC2 740 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 SPAG5Q96R06 1193 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 IFIH1Q9BYX4 1025 aaKnown RBP11.17□□□□□ -0.62
HMGCR-201ENST00000287936 SLC39A2Q9NP94 309 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 RIC8AQ9NPQ8 531 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 UBR2Q8IWV8 1755 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 SPDYE3A6NKU9 549 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 RHOBTB3O94955 611 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 PSMD2Q13200 908 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 MAN2A1Q16706 1144 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 SLC9C1Q4G0N8 1177 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 VWA3BQ502W6 1294 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 TSKSQ9UJT2 592 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 TRIM49BA6NDI0 452 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 GOLGA6L10A6NI86 522 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 KLRK1P26718 216 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 SMARCA1P28370 1054 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 SEPT2Q15019 361 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 EARS2Q5JPH6 523 aaKnown RBP11.17□□□□□ -0.62
HMGCR-201ENST00000287936 C3orf67Q6ZVT6 689 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 LRRC47Q8N1G4 583 aaKnown RBP11.17□□□□□ -0.62
HMGCR-201ENST00000287936 SLC44A5Q8NCS7 719 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 SPATA20Q8TB22 786 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 USP40Q9NVE5 1235 aa11.17□□□□□ -0.62
HMGCR-201ENST00000287936 STXBP3O00186 592 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 TTLL1O95922 423 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 GYPCP04921 128 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 LAMA4Q16363 1823 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 PVALEFA0A1B0GWK0 134 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 SERPINB2P05120 415 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 FXR1P51114 621 aaKnown RBP eCLIP11.16□□□□□ -0.62
HMGCR-201ENST00000287936 VPS72Q15906 364 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 PPP1R18Q6NYC8 613 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 C2CD5Q86YS7 1000 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 NOX5Q96PH1 765 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 FAM207AQ9NSI2 230 aaPredicted RBP11.16□□□□□ -0.62
HMGCR-201ENST00000287936 DDX25Q9UHL0 483 aaKnown RBP11.16□□□□□ -0.62
HMGCR-201ENST00000287936 CETN3O15182 167 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 FUT2Q10981 343 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 TCERG1LQ5VWI1 586 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 TYW1BQ6NUM6 668 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 UNC13DQ70J99 1090 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 ANKS1AQ92625 1134 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 INTS13Q9NVM9 706 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 CAPN11Q9UMQ6 739 aa11.16□□□□□ -0.62
HMGCR-201ENST00000287936 MATR3P43243 847 aaKnown RBP eCLIP11.16□□□□□ -0.62
HMGCR-201ENST00000287936 LRRC63Q05C16 580 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms