RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 UBA7P41226 1012 aa28.19■■■□□ 2.1
ROM1-201ENST00000278833 GPSM2P81274 684 aa28.19■■■□□ 2.1
ROM1-201ENST00000278833 STIM1Q13586 685 aa28.19■■■□□ 2.1
ROM1-201ENST00000278833 INF2Q27J81 1249 aa28.19■■■□□ 2.1
ROM1-201ENST00000278833 TBC1D22AQ8WUA7 517 aa28.19■■■□□ 2.1
ROM1-201ENST00000278833 RABGGTAQ92696 567 aa28.19■■■□□ 2.1
ROM1-201ENST00000278833 EYA3Q99504 573 aa28.19■■■□□ 2.1
ROM1-201ENST00000278833 GNA11P29992 359 aa28.18■■■□□ 2.1
ROM1-201ENST00000278833 TUBB4BP68371 445 aa28.18■■■□□ 2.1
ROM1-201ENST00000278833 CYP26C1Q6V0L0 522 aa28.18■■■□□ 2.1
ROM1-201ENST00000278833 SLC44A5Q8NCS7 719 aa28.18■■■□□ 2.1
ROM1-201ENST00000278833 GDAQ9Y2T3 454 aa28.18■■■□□ 2.1
ROM1-201ENST00000278833 LGALS16A8MUM7 142 aa28.17■■■□□ 2.1
ROM1-201ENST00000278833 KIF5CO60282 957 aa28.17■■■□□ 2.1
ROM1-201ENST00000278833 PARP1P09874 1014 aaKnown RBP28.17■■■□□ 2.1
ROM1-201ENST00000278833 OR52Z1P0C646 297 aa28.17■■■□□ 2.1
ROM1-201ENST00000278833 HOXA7P31268 230 aaPredicted RBP28.17■■■□□ 2.1
ROM1-201ENST00000278833 IRF2BP1Q8IU81 584 aa28.17■■■□□ 2.1
ROM1-201ENST00000278833 MAPKAPK5Q8IW41 473 aa28.17■■■□□ 2.1
ROM1-201ENST00000278833 DHTKD1Q96HY7 919 aaPredicted RBP28.17■■■□□ 2.1
ROM1-201ENST00000278833 C6orf50Q9HD87 102 aa28.17■■■□□ 2.1
ROM1-201ENST00000278833 FHOD1Q9Y613 1164 aa28.17■■■□□ 2.1
ROM1-201ENST00000278833 RHBDL3P58872 404 aa28.17■■■□□ 2.1
ROM1-201ENST00000278833 NONOQ15233 471 aaKnown RBP eCLIP28.17■■■□□ 2.1
ROM1-201ENST00000278833 RPGRQ92834 1020 aaKnown RBP28.17■■■□□ 2.1
ROM1-201ENST00000278833 CCT6AP40227 531 aaKnown RBP28.16■■■□□ 2.1
ROM1-201ENST00000278833 TEX11Q8IYF3 940 aa28.16■■■□□ 2.1
ROM1-201ENST00000278833 TAB2Q9NYJ8 693 aa28.16■■■□□ 2.1
ROM1-201ENST00000278833 GGA1Q9UJY5 639 aa28.16■■■□□ 2.1
ROM1-201ENST00000278833 STX8Q9UNK0 236 aa28.16■■■□□ 2.1
ROM1-201ENST00000278833 UTRNP46939 3433 aa28.16■■■□□ 2.1
ROM1-201ENST00000278833 PSMA7O14818 248 aa28.15■■■□□ 2.1
ROM1-201ENST00000278833 KIF20AO95235 890 aa28.15■■■□□ 2.1
ROM1-201ENST00000278833 HOXA10P31260 410 aaPredicted RBP28.15■■■□□ 2.1
ROM1-201ENST00000278833 JAKMIP3Q5VZ66 844 aa28.15■■■□□ 2.1
ROM1-201ENST00000278833 TMCO3Q6UWJ1 677 aa28.15■■■□□ 2.1
ROM1-201ENST00000278833 ZNF507Q8TCN5 953 aa28.15■■■□□ 2.1
ROM1-201ENST00000278833 RRP36Q96EU6 259 aaKnown RBP28.15■■■□□ 2.1
ROM1-201ENST00000278833 C7orf25Q9BPX7 421 aa28.15■■■□□ 2.1
ROM1-201ENST00000278833 CD2APQ9Y5K6 639 aa28.15■■■□□ 2.1
ROM1-201ENST00000278833 ERVK-24P63145 666 aa28.15■■■□□ 2.1
ROM1-201ENST00000278833 GOLGA1Q92805 767 aa28.15■■■□□ 2.1
ROM1-201ENST00000278833 RBM17Q96I25 401 aaKnown RBP28.15■■■□□ 2.1
ROM1-201ENST00000278833 BBOX1O75936 387 aa28.14■■■□□ 2.1
ROM1-201ENST00000278833 UFL1O94874 794 aa28.14■■■□□ 2.1
ROM1-201ENST00000278833 NAPAP54920 295 aa28.14■■■□□ 2.1
ROM1-201ENST00000278833 ST5P78524 1137 aa28.14■■■□□ 2.1
ROM1-201ENST00000278833 SLC4A8Q2Y0W8 1093 aa28.14■■■□□ 2.1
ROM1-201ENST00000278833 TTI2Q6NXR4 508 aa28.14■■■□□ 2.1
ROM1-201ENST00000278833 SYT17Q9BSW7 474 aa28.14■■■□□ 2.1
ROM1-201ENST00000278833 RIOX1Q9H6W3 641 aa28.14■■■□□ 2.1
ROM1-201ENST00000278833 PNMA6AP0CW24 399 aaPredicted RBP28.13■■■□□ 2.09
ROM1-201ENST00000278833 TMC4Q7Z404 712 aa28.13■■■□□ 2.09
ROM1-201ENST00000278833 NEK8Q86SG6 692 aa28.13■■■□□ 2.09
ROM1-201ENST00000278833 CCDC47Q96A33 483 aaKnown RBP28.13■■■□□ 2.09
ROM1-201ENST00000278833 VPS16Q9H269 839 aa28.13■■■□□ 2.09
ROM1-201ENST00000278833 CDC23Q9UJX2 597 aa28.13■■■□□ 2.09
ROM1-201ENST00000278833 ZNF662Q6ZS27 426 aa28.12■■■□□ 2.09
ROM1-201ENST00000278833 CABP7Q86V35 215 aa28.12■■■□□ 2.09
ROM1-201ENST00000278833 MB21D1Q8N884 522 aa28.12■■■□□ 2.09
ROM1-201ENST00000278833 CEP112Q8N8E3 955 aa28.12■■■□□ 2.09
ROM1-201ENST00000278833 CPLX3Q8WVH0 158 aa28.12■■■□□ 2.09
ROM1-201ENST00000278833 DNAJC7Q99615 494 aa28.12■■■□□ 2.09
ROM1-201ENST00000278833 SAP30BPQ9UHR5 308 aaKnown RBP28.12■■■□□ 2.09
ROM1-201ENST00000278833 SUGT1Q9Y2Z0 365 aa28.12■■■□□ 2.09
ROM1-201ENST00000278833 MYO3BQ8WXR4 1341 aa28.12■■■□□ 2.09
ROM1-201ENST00000278833 KIF13BQ9NQT8 1826 aa28.12■■■□□ 2.09
ROM1-201ENST00000278833 CDC25AP30304 524 aa28.12■■■□□ 2.09
ROM1-201ENST00000278833 GREB1LQ9C091 1923 aaPredicted RBP28.12■■■□□ 2.09
ROM1-201ENST00000278833 BICDL2A1A5D9 508 aa28.11■■■□□ 2.09
ROM1-201ENST00000278833 SRGAP1Q7Z6B7 1085 aa28.11■■■□□ 2.09
ROM1-201ENST00000278833 NLGN2Q8NFZ4 835 aa28.11■■■□□ 2.09
ROM1-201ENST00000278833 SEC63Q9UGP8 760 aaKnown RBP28.11■■■□□ 2.09
ROM1-201ENST00000278833 SMCO2A6NFE2 343 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 PP2D1A8MPX8 630 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 SLC51AQ86UW1 340 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 LRRC15Q8TF66 581 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 CRAMP1Q96RY5 1269 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 NUP88Q99567 741 aaPredicted RBP28.1■■■□□ 2.09
ROM1-201ENST00000278833 TRIM9Q9C026 710 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 KLRG2A4D1S0 409 aaPredicted RBP28.1■■■□□ 2.09
ROM1-201ENST00000278833 PLCG1P19174 1290 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 CCNE1P24864 410 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 ARHGAP25P42331 645 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 DNM2P50570 870 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 UBXN1Q04323 297 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 ASPRV1Q53RT3 343 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 SOGA3Q5TF21 947 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 PPP1R18Q6NYC8 613 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 RETREG2Q8NC44 543 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 RASSF8Q8NHQ8 419 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 CAPN11Q9UMQ6 739 aa28.1■■■□□ 2.09
ROM1-201ENST00000278833 POTEB2H3BUK9 544 aa28.09■■■□□ 2.09
ROM1-201ENST00000278833 SNHG28P0DPA3 235 aa28.09■■■□□ 2.09
ROM1-201ENST00000278833 KRT9P35527 623 aa28.09■■■□□ 2.09
ROM1-201ENST00000278833 FAM114A1Q8IWE2 563 aa28.09■■■□□ 2.09
ROM1-201ENST00000278833 ANKRD31Q8N7Z5 1873 aa28.09■■■□□ 2.09
ROM1-201ENST00000278833 IQCDQ96DY2 449 aa28.09■■■□□ 2.09
ROM1-201ENST00000278833 CEP95Q96GE4 821 aa28.09■■■□□ 2.09
ROM1-201ENST00000278833 LZTFL1Q9NQ48 299 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms