RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 RTFDC1Q9BY42 306 aaPredicted RBP18.88■□□□□ 0.61
SSPN-201ENST00000242729 CNTNAP4Q9C0A0 1308 aa18.88■□□□□ 0.61
SSPN-201ENST00000242729 PALM3A6NDB9 673 aaPredicted RBP18.88■□□□□ 0.61
SSPN-201ENST00000242729 POTEMA6NI47 508 aa18.88■□□□□ 0.61
SSPN-201ENST00000242729 C6orf229H3BNL8 230 aa18.88■□□□□ 0.61
SSPN-201ENST00000242729 H7C1D1 291 aa18.88■□□□□ 0.61
SSPN-201ENST00000242729 VSNL1P62760 191 aa18.88■□□□□ 0.61
SSPN-201ENST00000242729 LRRC41Q15345 812 aa18.88■□□□□ 0.61
SSPN-201ENST00000242729 WDR59Q6PJI9 974 aa18.88■□□□□ 0.61
SSPN-201ENST00000242729 KRT26Q7Z3Y9 468 aa18.88■□□□□ 0.61
SSPN-201ENST00000242729 SMCR8Q8TEV9 937 aaPredicted RBP18.88■□□□□ 0.61
SSPN-201ENST00000242729 ABCB6Q9NP58 842 aa18.88■□□□□ 0.61
SSPN-201ENST00000242729 TDP2O95551 362 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 OR52Z1P0C646 297 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 IDEP14735 1019 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 TBC1D8BQ0IIM8 1120 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 GRAPQ13588 217 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 CCDC122Q5T0U0 273 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 TRAPPC3LQ5T215 181 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 ZNF804AQ7Z570 1209 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 CCDC148Q8NFR7 591 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 GRAPLQ8TC17 118 aaPredicted RBP18.87■□□□□ 0.61
SSPN-201ENST00000242729 EXOC1Q9NV70 894 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 TTF2Q9UNY4 1162 aaKnown RBP18.87■□□□□ 0.61
SSPN-201ENST00000242729 ZBTB22O15209 634 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 ATP1A1P05023 1023 aaKnown RBP18.87■□□□□ 0.61
SSPN-201ENST00000242729 SPAG1Q07617 926 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 OR8K1Q8NGG5 319 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 CNOT6LQ96LI5 555 aaKnown RBP18.87■□□□□ 0.61
SSPN-201ENST00000242729 PSMB7Q99436 277 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 LACRTQ9GZZ8 138 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 PDE11AQ9HCR9 933 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 CD209Q9NNX6 404 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 SEC63Q9UGP8 760 aaKnown RBP18.87■□□□□ 0.61
SSPN-201ENST00000242729 IRS2Q9Y4H2 1338 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 LGALS16A8MUM7 142 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 ZNF185O15231 689 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 SLC16A2P36021 539 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 RAD51AP2Q09MP3 1159 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 UBE2SQ16763 222 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 SOGA3Q5TF21 947 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 TTI2Q6NXR4 508 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 KIAA1328Q86T90 577 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 NUDT12Q9BQG2 462 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 KANSL2Q9H9L4 492 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 FAM207AQ9NSI2 230 aaPredicted RBP18.87■□□□□ 0.61
SSPN-201ENST00000242729 KBTBD4Q9NVX7 518 aa18.87■□□□□ 0.61
SSPN-201ENST00000242729 FLT1P17948 1338 aa18.86■□□□□ 0.61
SSPN-201ENST00000242729 ITIH6Q6UXX5 1313 aa18.86■□□□□ 0.61
SSPN-201ENST00000242729 HERVK_113P62684 666 aa18.86■□□□□ 0.61
SSPN-201ENST00000242729 STIM1Q13586 685 aa18.86■□□□□ 0.61
SSPN-201ENST00000242729 NONOQ15233 471 aaKnown RBP eCLIP18.86■□□□□ 0.61
SSPN-201ENST00000242729 CCDC155Q8N6L0 562 aa18.86■□□□□ 0.61
SSPN-201ENST00000242729 TRIM9Q9C026 710 aa18.86■□□□□ 0.61
SSPN-201ENST00000242729 DNAJC5Q9H3Z4 198 aa18.86■□□□□ 0.61
SSPN-201ENST00000242729 SLC37A4O43826 429 aa18.86■□□□□ 0.61
SSPN-201ENST00000242729 TSR1Q2NL82 804 aaKnown RBP18.86■□□□□ 0.61
SSPN-201ENST00000242729 GIMAP8Q8ND71 665 aaPredicted RBP18.86■□□□□ 0.61
SSPN-201ENST00000242729 RRP36Q96EU6 259 aaKnown RBP18.86■□□□□ 0.61
SSPN-201ENST00000242729 TBC1D7Q9P0N9 293 aa18.86■□□□□ 0.61
SSPN-201ENST00000242729 RASSF10A6NK89 507 aa18.85■□□□□ 0.61
SSPN-201ENST00000242729 TNNI2P48788 182 aa18.85■□□□□ 0.61
SSPN-201ENST00000242729 GNAQP50148 359 aa18.85■□□□□ 0.61
SSPN-201ENST00000242729 GSPT2Q8IYD1 628 aaKnown RBP18.85■□□□□ 0.61
SSPN-201ENST00000242729 NOC4LQ9BVI4 516 aaKnown RBP18.85■□□□□ 0.61
SSPN-201ENST00000242729 MYO6Q9UM54 1294 aa18.85■□□□□ 0.61
SSPN-201ENST00000242729 LAMB2P55268 1798 aa18.85■□□□□ 0.61
SSPN-201ENST00000242729 CTAGE15A4D2H0 777 aa18.85■□□□□ 0.61
SSPN-201ENST00000242729 SSBP05455 408 aaKnown RBP eCLIP18.85■□□□□ 0.61
SSPN-201ENST00000242729 CTAGE8P0CG41 777 aa18.85■□□□□ 0.61
SSPN-201ENST00000242729 GTF2IP78347 998 aa18.85■□□□□ 0.61
SSPN-201ENST00000242729 CT47A1Q5JQC4 288 aaPredicted RBP18.85■□□□□ 0.61
SSPN-201ENST00000242729 CTAGE6Q86UF2 777 aa18.85■□□□□ 0.61
SSPN-201ENST00000242729 CTAGE4Q8IX94 777 aa18.85■□□□□ 0.61
SSPN-201ENST00000242729 MMTAG2Q9BU76 263 aaKnown RBP18.85■□□□□ 0.61
SSPN-201ENST00000242729 SH3GLB2Q9NR46 395 aa18.85■□□□□ 0.61
SSPN-201ENST00000242729 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.84■□□□□ 0.61
SSPN-201ENST00000242729 EPHB6O15197 1021 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 SCNN1DP51172 638 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 CACNB1Q02641 598 aaPredicted RBP18.84■□□□□ 0.61
SSPN-201ENST00000242729 PRR5LQ6MZQ0 368 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 NEK8Q86SG6 692 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 CCDC51Q96ER9 411 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 CASZ1Q86V15 1759 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 WNK3Q9BYP7 1800 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 FAM196BA6NMK8 535 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 RHOBTB3O94955 611 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 TTBK2Q6IQ55 1244 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 REXO1Q8N1G1 1221 aaKnown RBP18.84■□□□□ 0.61
SSPN-201ENST00000242729 ANKRD13CQ8N6S4 541 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 KIAA0895Q8NCT3 520 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 ZNF507Q8TCN5 953 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 MMS19Q96T76 1030 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 C6orf50Q9HD87 102 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 LRRC4BQ9NT99 713 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 POLLQ9UGP5 575 aa18.84■□□□□ 0.61
SSPN-201ENST00000242729 FAM170AA1A519 330 aa18.83■□□□□ 0.61
SSPN-201ENST00000242729 SHROOM1Q2M3G4 852 aaPredicted RBP18.83■□□□□ 0.61
SSPN-201ENST00000242729 FKBP15Q5T1M5 1219 aa18.83■□□□□ 0.61
SSPN-201ENST00000242729 CEP112Q8N8E3 955 aa18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms