RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 FOXP4Q8IVH2 680 aaPredicted RBP11.26□□□□□ -0.61
TTC1-201ENST00000231238 CCDC17Q96LX7 622 aa11.26□□□□□ -0.61
TTC1-201ENST00000231238 CSRNP1Q96S65 589 aa11.26□□□□□ -0.61
TTC1-201ENST00000231238 GMLQ99445 158 aa11.26□□□□□ -0.61
TTC1-201ENST00000231238 EHD4Q9H223 541 aa11.26□□□□□ -0.61
TTC1-201ENST00000231238 MYOZ2Q9NPC6 264 aa11.26□□□□□ -0.61
TTC1-201ENST00000231238 TMPRSS4Q9NRS4 437 aa11.26□□□□□ -0.61
TTC1-201ENST00000231238 STK36Q9NRP7 1315 aa11.26□□□□□ -0.61
TTC1-201ENST00000231238 ADAMTSL1Q8N6G6 1762 aa11.26□□□□□ -0.61
TTC1-201ENST00000231238 GOLGA6L4A6NEF3 574 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 H7C1D1 291 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 RAD21O60216 631 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 DEXIO95424 95 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 TOP1P11387 765 aaKnown RBP11.25□□□□□ -0.61
TTC1-201ENST00000231238 LMNB1P20700 586 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 GMPSP49915 693 aaPredicted RBP11.25□□□□□ -0.61
TTC1-201ENST00000231238 DNM1Q05193 864 aaKnown RBP11.25□□□□□ -0.61
TTC1-201ENST00000231238 CBLBQ13191 982 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 CERKLQ49MI3 558 aaPredicted RBP11.25□□□□□ -0.61
TTC1-201ENST00000231238 ZFPM1Q8IX07 1006 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
TTC1-201ENST00000231238 MEIOBQ8N635 442 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 ZNF396Q96N95 335 aaPredicted RBP11.25□□□□□ -0.61
TTC1-201ENST00000231238 CABP5Q9NP86 173 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 CNPY2Q9Y2B0 182 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 NID2Q14112 1375 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 DDTLA6NHG4 134 aaPredicted RBP11.25□□□□□ -0.61
TTC1-201ENST00000231238 ERVH48-1M5A8F1 160 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 FDPSP14324 419 aaKnown RBP11.25□□□□□ -0.61
TTC1-201ENST00000231238 AKR1B1P15121 316 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 GABPAQ06546 454 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 TROAPQ12815 778 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 TNFAIP1Q13829 316 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 FAM151AQ8WW52 585 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 PIBF1Q8WXW3 757 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 ZNF775Q96BV0 537 aaPredicted RBP11.25□□□□□ -0.61
TTC1-201ENST00000231238 CEP95Q96GE4 821 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 CHAMP1Q96JM3 812 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 PURBQ96QR8 312 aaKnown RBP11.25□□□□□ -0.61
TTC1-201ENST00000231238 TMEM47Q9BQJ4 181 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 RNF26Q9BY78 433 aaPredicted RBP11.25□□□□□ -0.61
TTC1-201ENST00000231238 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.25□□□□□ -0.61
TTC1-201ENST00000231238 IL17RBQ9NRM6 502 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 CFAP45Q9UL16 551 aa11.25□□□□□ -0.61
TTC1-201ENST00000231238 COL4A5P29400 1685 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 FER1L6Q2WGJ9 1857 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 FAM196BA6NMK8 535 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 TTLL1O95922 423 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 MBD3O95983 291 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 PARP1P09874 1014 aaKnown RBP11.24□□□□□ -0.61
TTC1-201ENST00000231238 SHMT1P34896 483 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 DHX9Q08211 1270 aaKnown RBP11.24□□□□□ -0.61
TTC1-201ENST00000231238 RESTQ13127 1097 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 NTRK3Q16288 839 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 OTUD7BQ6GQQ9 843 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 TMTC3Q6ZXV5 915 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 FBXO18Q8NFZ0 1043 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 ANKS1AQ92625 1134 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 SPATA32Q96LK8 384 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 SYT17Q9BSW7 474 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 SCAND2PQ9GZW5 306 aaPredicted RBP11.24□□□□□ -0.61
TTC1-201ENST00000231238 GZF1Q9H116 711 aaPredicted RBP11.24□□□□□ -0.61
TTC1-201ENST00000231238 BRMS1Q9HCU9 246 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 PRM3Q9NNZ6 103 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 PGPEP1Q9NXJ5 209 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 CLIP2Q9UDT6 1046 aa11.24□□□□□ -0.61
TTC1-201ENST00000231238 CNOT7Q9UIV1 285 aaKnown RBP11.24□□□□□ -0.61
TTC1-201ENST00000231238 BRCA1P38398 1863 aaKnown RBP11.23□□□□□ -0.61
TTC1-201ENST00000231238 CDK5RAP2Q96SN8 1893 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 FZD9O00144 591 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 PLEKHA8P1O95397 391 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 ABL2P42684 1182 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 GRM4Q14833 912 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 ABCB5Q2M3G0 1257 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 TBC1D10BQ4KMP7 808 aaPredicted RBP11.23□□□□□ -0.61
TTC1-201ENST00000231238 FKBP1CQ5VVH2 108 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 KRT40Q6A162 431 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 RCSD1Q6JBY9 416 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 FAM173BQ6P4H8 233 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 Q6ZVU0 165 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 ILDR2Q71H61 639 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 BRAPQ7Z569 592 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 USP48Q86UV5 1035 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 LRRC47Q8N1G4 583 aaKnown RBP11.23□□□□□ -0.61
TTC1-201ENST00000231238 DPF2Q92785 391 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 POM121Q96HA1 1249 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 MAP3K14Q99558 947 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 LZTS2Q9BRK4 669 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 MTMR4Q9NYA4 1195 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 RNF181Q9P0P0 153 aa11.23□□□□□ -0.61
TTC1-201ENST00000231238 HERC5Q9UII4 1024 aaKnown RBP11.23□□□□□ -0.61
TTC1-201ENST00000231238 PSME4Q14997 1843 aa11.22□□□□□ -0.61
TTC1-201ENST00000231238 FOCADQ5VW36 1801 aa11.22□□□□□ -0.61
TTC1-201ENST00000231238 WNT10BO00744 389 aa11.22□□□□□ -0.61
TTC1-201ENST00000231238 PRPF3O43395 683 aaKnown RBP11.22□□□□□ -0.61
TTC1-201ENST00000231238 LMOD1P29536 600 aaPredicted RBP11.22□□□□□ -0.61
TTC1-201ENST00000231238 CEBPZQ03701 1054 aaKnown RBP11.22□□□□□ -0.61
TTC1-201ENST00000231238 CCDC96Q2M329 555 aa11.22□□□□□ -0.61
TTC1-201ENST00000231238 KIF4BQ2VIQ3 1234 aa11.22□□□□□ -0.61
TTC1-201ENST00000231238 NBPF9Q3BBW0 867 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 134.1 ms