RNA–Protein interactions for RNA: ENST00000228872.8

CDKN1B-201, Transcript of cyclin dependent kinase inhibitor 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1B, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1B-201ENST00000228872 SHISA4Q96DD7 197 aa19.71■□□□□ 0.75
CDKN1B-201ENST00000228872 PIH1D3Q9NQM4 214 aaKnown RBP19.71■□□□□ 0.75
CDKN1B-201ENST00000228872 WNT7AO00755 349 aa19.71■□□□□ 0.75
CDKN1B-201ENST00000228872 SLC7A5Q01650 507 aa19.71■□□□□ 0.75
CDKN1B-201ENST00000228872 UBE3CQ15386 1083 aa19.71■□□□□ 0.75
CDKN1B-201ENST00000228872 ZNF658Q5TYW1 1059 aaPredicted RBP19.71■□□□□ 0.75
CDKN1B-201ENST00000228872 GIMAP7Q8NHV1 300 aa19.71■□□□□ 0.75
CDKN1B-201ENST00000228872 CAVIN3Q969G5 261 aa19.71■□□□□ 0.75
CDKN1B-201ENST00000228872 ZNF532Q9HCE3 1301 aa19.71■□□□□ 0.75
CDKN1B-201ENST00000228872 RTL9Q8NET4 1388 aa19.71■□□□□ 0.75
CDKN1B-201ENST00000228872 GTPBP6O43824 516 aaPredicted RBP19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 NAA35Q5VZE5 725 aa19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 MTRQ99707 1265 aa19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 CNNM1Q9NRU3 951 aa19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 LRRC4BQ9NT99 713 aa19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 MCM8Q9UJA3 840 aa19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 H7C1D1 291 aa19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 ALX1Q15699 326 aa19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 PDXDC2PQ6P474 469 aa19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 SPATA4Q8NEY3 305 aa19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 ZIM3Q96PE6 472 aa19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 NHEJ1Q9H9Q4 299 aaPredicted RBP19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 MAPK8IP1Q9UQF2 711 aa19.7■□□□□ 0.74
CDKN1B-201ENST00000228872 PES1O00541 588 aaKnown RBP19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 IDH1O75874 414 aaKnown RBP19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 IPO7O95373 1038 aaKnown RBP19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 BMP15O95972 392 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 LSP1P33241 339 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 NNTQ13423 1086 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 NEDD9Q14511 834 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 KDM7AQ6ZMT4 941 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 STRBPQ96SI9 672 aaKnown RBP19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 EPN3Q9H201 632 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 EPB41L4AQ9HCS5 686 aaPredicted RBP19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 GDAQ9Y2T3 454 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 PRCPP42785 496 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 PDS5AQ29RF7 1337 aaKnown RBP19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 PREPLQ4J6C6 727 aaPredicted RBP19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 KCTD16Q68DU8 428 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 CCDC170Q8IYT3 715 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 RNPC3Q96LT9 517 aaKnown RBP19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 ZKSCAN3Q9BRR0 538 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 VCPKMTQ9H867 229 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 ZPR1O75312 459 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 RDXP35241 583 aaKnown RBP19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 WTAPQ15007 396 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 HAUS3Q68CZ6 603 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 ZNF473Q8WTR7 871 aaKnown RBP19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 CNNM2Q9H8M5 875 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 STIM2Q9P246 746 aa19.69■□□□□ 0.74
CDKN1B-201ENST00000228872 TRIM49BA6NDI0 452 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 TRIM37O94972 964 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 PDE6AP16499 860 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 CYP27A1Q02318 531 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 ACTN3Q08043 901 aaPredicted RBP19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 KIF5AQ12840 1032 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 ZNF174Q15697 407 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 ZNF622Q969S3 477 aaKnown RBP eCLIP19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 KLC4Q9NSK0 619 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 AGPAT5Q9NUQ2 364 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 ZNHIT6Q9NWK9 470 aaKnown RBP19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 IQSEC3Q9UPP2 1182 aaPredicted RBP19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 ARAP2Q8WZ64 1704 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 TNFRSF8P28908 595 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 KRT2P35908 639 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 MATR3P43243 847 aaKnown RBP eCLIP19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 VAV2P52735 878 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 SMTNP53814 917 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 TBC1D9BQ66K14 1250 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 AMIGO3Q86WK7 504 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 KRT23Q9C075 422 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 TTYH3Q9C0H2 523 aa19.68■□□□□ 0.74
CDKN1B-201ENST00000228872 RPN1P04843 607 aaKnown RBP19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 ADRA2BP18089 450 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 ELF1P32519 619 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 AKNAD1Q5T1N1 836 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 RNF187Q5TA31 235 aaPredicted RBP19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 IFNL3Q8IZI9 196 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 SMCR8Q8TEV9 937 aaPredicted RBP19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 NUP133Q8WUM0 1156 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 TSGA10Q9BZW7 698 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 POLD4Q9HCU8 107 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 RMND1Q9NWS8 449 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 KRT14P02533 472 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 HMGB2P26583 209 aaKnown RBP19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 GUCY1A3Q02108 690 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 PTGISQ16647 500 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 RRP12Q5JTH9 1297 aaKnown RBP19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 SMIM5Q71RC9 77 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 VGLL2Q8N8G2 317 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 FANCBQ8NB91 859 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 TRIM58Q8NG06 486 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 NAPBQ9H115 298 aa19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 SRP68Q9UHB9 627 aaKnown RBP19.67■□□□□ 0.74
CDKN1B-201ENST00000228872 TCRBV5S4A2TA0A5A2 114 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 RASSF9O75901 435 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 EEF1GP26641 437 aaKnown RBP19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 PLCB4Q15147 1175 aa19.66■□□□□ 0.74
CDKN1B-201ENST00000228872 CCDC152Q4G0S7 254 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms