RNA–Protein interactions for RNA: ENST00000228307.11

PXN-201, Transcript of paxillin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PXN, Length 3,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-201ENST00000228307 AMPD3Q01432 767 aa17.5■□□□□ 0.39
PXN-201ENST00000228307 PRPF4BQ13523 1007 aaKnown RBP17.5■□□□□ 0.39
PXN-201ENST00000228307 MMS19Q96T76 1030 aa17.5■□□□□ 0.39
PXN-201ENST00000228307 EFCC1Q9HA90 598 aa17.5■□□□□ 0.39
PXN-201ENST00000228307 BMP2KQ9NSY1 1161 aaPredicted RBP17.5■□□□□ 0.39
PXN-201ENST00000228307 MYO1AQ9UBC5 1043 aa17.5■□□□□ 0.39
PXN-201ENST00000228307 TCP11X2Q5H9J9 407 aa17.5■□□□□ 0.39
PXN-201ENST00000228307 RRAGAQ7L523 313 aa17.5■□□□□ 0.39
PXN-201ENST00000228307 NKX2-3Q8TAU0 364 aa17.5■□□□□ 0.39
PXN-201ENST00000228307 TUBGCP2Q9BSJ2 902 aa17.5■□□□□ 0.39
PXN-201ENST00000228307 ZNF142P52746 1687 aaPredicted RBP17.5■□□□□ 0.39
PXN-201ENST00000228307 ZNF185O15231 689 aa17.5■□□□□ 0.39
PXN-201ENST00000228307 CALML3P27482 149 aa17.5■□□□□ 0.39
PXN-201ENST00000228307 DYMQ7RTS9 669 aa17.5■□□□□ 0.39
PXN-201ENST00000228307 TRMT1LQ7Z2T5 733 aaKnown RBP17.5■□□□□ 0.39
PXN-201ENST00000228307 CALM1P0DP23 149 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 CALM2P0DP24 149 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 CALM3P0DP25 149 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 CD44P16070 742 aaKnown RBP17.49■□□□□ 0.39
PXN-201ENST00000228307 RASGRP2Q7LDG7 609 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 KIFC2Q96AC6 838 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 SELENOOQ9BVL4 669 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 MXD3Q9BW11 206 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 TOB1P50616 345 aaPredicted RBP17.49■□□□□ 0.39
PXN-201ENST00000228307 CACNB3P54284 484 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 CLEC4GQ6UXB4 293 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 KIAA0825Q8IV33 1275 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 KLHL7Q8IXQ5 586 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 CEP89Q96ST8 783 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 TSG101Q99816 390 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 DNM2P50570 870 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 ZSCAN10Q96SZ4 725 aaPredicted RBP17.49■□□□□ 0.39
PXN-201ENST00000228307 UBA5Q9GZZ9 404 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 DBNDD1Q9H9R9 158 aa17.49■□□□□ 0.39
PXN-201ENST00000228307 BICDL2A1A5D9 508 aa17.48■□□□□ 0.39
PXN-201ENST00000228307 LRRIQ3A6PVS8 624 aaPredicted RBP17.48■□□□□ 0.39
PXN-201ENST00000228307 TCERG1LQ5VWI1 586 aa17.48■□□□□ 0.39
PXN-201ENST00000228307 RNF26Q9BY78 433 aaPredicted RBP17.48■□□□□ 0.39
PXN-201ENST00000228307 RBM28Q9NW13 759 aaKnown RBP17.48■□□□□ 0.39
PXN-201ENST00000228307 LRWD1Q9UFC0 647 aa17.48■□□□□ 0.39
PXN-201ENST00000228307 SEC63Q9UGP8 760 aaKnown RBP17.48■□□□□ 0.39
PXN-201ENST00000228307 NAPAP54920 295 aa17.48■□□□□ 0.39
PXN-201ENST00000228307 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.48■□□□□ 0.39
PXN-201ENST00000228307 RPGRIP1Q96KN7 1286 aa17.48■□□□□ 0.39
PXN-201ENST00000228307 CCDC114Q96M63 670 aa17.48■□□□□ 0.39
PXN-201ENST00000228307 PPANQ9NQ55 473 aaKnown RBP17.48■□□□□ 0.39
PXN-201ENST00000228307 PRCPP42785 496 aa17.48■□□□□ 0.39
PXN-201ENST00000228307 INF2Q27J81 1249 aa17.48■□□□□ 0.39
PXN-201ENST00000228307 STRCP1A6NGW2 1772 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 ABCC12Q96J65 1359 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 USP17L3A6NCW0 530 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 USP17L4A6NCW7 530 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 ACTN4O43707 911 aaKnown RBP17.47■□□□□ 0.39
PXN-201ENST00000228307 SPTY2D1Q68D10 685 aaPredicted RBP17.47■□□□□ 0.39
PXN-201ENST00000228307 USP17L1Q7RTZ2 530 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 SGMS1Q86VZ5 419 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 EFCAB13Q8IY85 973 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 TNS2Q63HR2 1409 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 JCADQ9P266 1359 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 FGFR1OPO95684 399 aaKnown RBP17.47■□□□□ 0.39
PXN-201ENST00000228307 ABL1P00519 1130 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 BARGINQ6ZT62 677 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 SRCAPQ6ZRS2 3230 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 A0A087WUV0 522 aaPredicted RBP17.47■□□□□ 0.39
PXN-201ENST00000228307 CCDC91Q7Z6B0 441 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 SMCR8Q8TEV9 937 aaPredicted RBP17.47■□□□□ 0.39
PXN-201ENST00000228307 SCLT1Q96NL6 688 aa17.47■□□□□ 0.39
PXN-201ENST00000228307 ZNF18P17022 549 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 ARID4AP29374 1257 aaPredicted RBP17.46■□□□□ 0.39
PXN-201ENST00000228307 USP14P54578 494 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 ERVK-24P63145 666 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 PDCLQ13371 301 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 CT47A1Q5JQC4 288 aaPredicted RBP17.46■□□□□ 0.39
PXN-201ENST00000228307 GBP6Q6ZN66 633 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 KRT26Q7Z3Y9 468 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 TADA2BQ86TJ2 420 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 ZNF579Q8NAF0 562 aaKnown RBP17.46■□□□□ 0.39
PXN-201ENST00000228307 HSD3B7Q9H2F3 369 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 NHEJ1Q9H9Q4 299 aaPredicted RBP17.46■□□□□ 0.39
PXN-201ENST00000228307 LRRC4BQ9NT99 713 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 RWDD2AQ9UIY3 292 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 ZNF658Q5TYW1 1059 aaPredicted RBP17.46■□□□□ 0.39
PXN-201ENST00000228307 TRIM58Q8NG06 486 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 SPAG5Q96R06 1193 aa17.46■□□□□ 0.39
PXN-201ENST00000228307 SMIM23A6NLE4 172 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 MOCS3O95396 460 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 TXKP42681 527 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 TBX2Q13207 712 aaPredicted RBP17.45■□□□□ 0.38
PXN-201ENST00000228307 B4GALNT4Q76KP1 1039 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 VGLL2Q8N8G2 317 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 TSGA10Q9BZW7 698 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 SLC39A2Q9NP94 309 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 CACNA1FO60840 1977 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 FAM196BA6NMK8 535 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 MMP10P09238 476 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 RAPGEF1Q13905 1077 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 CCDC121Q6ZUS5 278 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 CERKQ8TCT0 537 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 COG1Q8WTW3 980 aa17.45■□□□□ 0.38
PXN-201ENST00000228307 NUP58Q9BVL2 599 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms