RNA–Protein interactions for RNA: ENST00000638223.1

KCNMA1-228, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,340 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-228ENST00000638223 RAPGEF1Q13905 1077 aa11.03□□□□□ -0.64
KCNMA1-228ENST00000638223 TOB2Q14106 344 aaPredicted RBP11.03□□□□□ -0.64
KCNMA1-228ENST00000638223 KARSQ15046 597 aaKnown RBP11.03□□□□□ -0.64
KCNMA1-228ENST00000638223 ADALQ6DHV7 355 aa11.03□□□□□ -0.64
KCNMA1-228ENST00000638223 MCTP2Q6DN12 878 aa11.03□□□□□ -0.64
KCNMA1-228ENST00000638223 EEF2KMTQ96G04 330 aa11.03□□□□□ -0.64
KCNMA1-228ENST00000638223 NT5C3AQ9H0P0 336 aa11.03□□□□□ -0.64
KCNMA1-228ENST00000638223 CLSTN2Q9H4D0 955 aa11.03□□□□□ -0.64
KCNMA1-228ENST00000638223 USP17L15C9J2P7 530 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 USP17L13C9JLJ4 530 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 USP17L11C9JVI0 530 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 USP17L18D6R9N7 530 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 USP17L22D6RA61 530 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 USP17L17D6RBQ6 530 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 USP17L19D6RCP7 530 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 USP17L20D6RJB6 530 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 PRPF3O43395 683 aaKnown RBP11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 TGFB2P61812 414 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 KIF23Q02241 960 aaPredicted RBP11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 USP17L24Q0WX57 530 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 FAM102BQ5T8I3 360 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 USP17L6PQ6QN14 398 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 ZSCAN30Q86W11 494 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 TBC1D5Q92609 795 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 PRMT6Q96LA8 375 aaPredicted RBP11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 C16orf45Q96MC5 204 aaPredicted RBP11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 ZNF577Q9BSK1 485 aa11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.02□□□□□ -0.64
KCNMA1-228ENST00000638223 MARF1Q9Y4F3 1742 aaKnown RBP11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 ZNF609O15014 1411 aa11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 PNMA6FA0A0J9YX94 578 aa11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 WTIPA6NIX2 430 aaPredicted RBP11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 EXOC3O60645 756 aa11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 PRPF4BQ13523 1007 aaKnown RBP11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 UVSSAQ2YD98 709 aa11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 TMED8Q6PL24 325 aaPredicted RBP11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 HHIPL2Q6UWX4 724 aa11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 LMBRD1Q9NUN5 540 aa11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 NFIAQ12857 509 aa11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 SNRNP48Q6IEG0 339 aaKnown RBP11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 OTUD6AQ7L8S5 288 aa11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 TTC12Q9H892 705 aaPredicted RBP11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 GPBP1L1Q9HC44 474 aaPredicted RBP11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 PNMA3Q9UL41 463 aa11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 KIF20BQ96Q89 1820 aa11.02□□□□□ -0.65
KCNMA1-228ENST00000638223 NR1I2O75469 434 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 TBC1D8BQ0IIM8 1120 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 CUL4AQ13619 759 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 Q3C1V9 767 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 CTNNBL1Q8WYA6 563 aaPredicted RBP11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 KIAA1024Q9UPX6 916 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 RGPD8O14715 1765 aaPredicted RBP11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 DISP2A7MBM2 1401 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 PXDNLA1KZ92 1463 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 MMP1P03956 469 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 CASP7P55210 303 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 RGS22Q8NE09 1264 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 DEPTORQ8TB45 409 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 SLF1Q9BQI6 1058 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 FOXP1Q9H334 677 aaPredicted RBP11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 LY9Q9HBG7 655 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 NFE2L3Q9Y4A8 694 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 DDNO94850 711 aaPredicted RBP11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 EPB41P11171 864 aaKnown RBP11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 RNF207Q6ZRF8 634 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 TICAM2Q86XR7 235 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 SLFN12Q8IYM2 578 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 NEK11Q8NG66 645 aa11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 SYMPKQ92797 1274 aaKnown RBP11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 NOC4LQ9BVI4 516 aaKnown RBP11.01□□□□□ -0.65
KCNMA1-228ENST00000638223 TTBK2Q6IQ55 1244 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 FHDC1Q9C0D6 1143 aaPredicted RBP11□□□□□ -0.65
KCNMA1-228ENST00000638223 IL25Q9H293 177 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 MYO6Q9UM54 1294 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 PCDHB13Q9Y5F0 798 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11□□□□□ -0.65
KCNMA1-228ENST00000638223 KIF1AQ12756 1690 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 M0QZ92 97 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 CDC27P30260 824 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 MTMR2Q13614 643 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 HSP90B2PQ58FF3 399 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 RCSD1Q6JBY9 416 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 STAG2Q8N3U4 1231 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 ANO3Q9BYT9 981 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 EPB41L4AQ9HCS5 686 aaPredicted RBP11□□□□□ -0.65
KCNMA1-228ENST00000638223 RNF146Q9NTX7 359 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 HOXC10Q9NYD6 342 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 MEIS1O00470 390 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 PAK1Q13153 545 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 FAM151AQ8WW52 585 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 CSRNP2Q9H175 543 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 TAF6LQ9Y6J9 622 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 AKAP12Q02952 1782 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 LRRIQ4A6NIV6 560 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 ZBTB5O15062 677 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 CCDC172P0C7W6 258 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 QRICH1Q2TAL8 776 aa11□□□□□ -0.65
KCNMA1-228ENST00000638223 ZNF512BQ96KM6 892 aaPredicted RBP11□□□□□ -0.65
KCNMA1-228ENST00000638223 GTPBP4Q9BZE4 634 aaKnown RBP11□□□□□ -0.65
KCNMA1-228ENST00000638223 BCL2L12Q9HB09 334 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms