RNA–Protein interactions for RNA: ENST00000578441.5

CTC1-204, Transcript of CST telomere replication complex component 1, humanhuman

TSL 5

Gene CTC1, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-204ENST00000578441 NEDD1Q8NHV4 660 aa12.02□□□□□ -0.49
CTC1-204ENST00000578441 MYLIPQ8WY64 445 aa12.02□□□□□ -0.49
CTC1-204ENST00000578441 GMCL1Q96IK5 515 aa12.02□□□□□ -0.49
CTC1-204ENST00000578441 RNPC3Q96LT9 517 aaKnown RBP12.02□□□□□ -0.49
CTC1-204ENST00000578441 SEZ6LQ9BYH1 1024 aa12.02□□□□□ -0.49
CTC1-204ENST00000578441 UPF3AQ9H1J1 476 aaKnown RBP12.02□□□□□ -0.49
CTC1-204ENST00000578441 TMEM39AQ9NV64 488 aa12.02□□□□□ -0.49
CTC1-204ENST00000578441 ZHX1Q9UKY1 873 aaPredicted RBP12.02□□□□□ -0.49
CTC1-204ENST00000578441 RIPK3Q9Y572 518 aa12.02□□□□□ -0.49
CTC1-204ENST00000578441 PLA2G6O60733 806 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 TIMP1P01033 207 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 TSPY3P0CV98 308 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 TSPY8P0CW00 308 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 BMP3P12645 472 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 STAT2P52630 851 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 GJA9P57773 515 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 KCNA10Q16322 511 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 TKFCQ3LXA3 575 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 C20orf194Q5TEA3 1177 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 FAM160B2Q86V87 743 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 CPXCR1Q8N123 301 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 CHURC1Q8WUH1 139 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 KIFC2Q96AC6 838 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.01□□□□□ -0.49
CTC1-204ENST00000578441 TBX21Q9UL17 535 aa12.01□□□□□ -0.49
CTC1-204ENST00000578441 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
CTC1-204ENST00000578441 M0R2C6 588 aa12□□□□□ -0.49
CTC1-204ENST00000578441 C6orf222P0C671 652 aaPredicted RBP12□□□□□ -0.49
CTC1-204ENST00000578441 ITGB8P26012 769 aa12□□□□□ -0.49
CTC1-204ENST00000578441 PLA2G5P39877 138 aa12□□□□□ -0.49
CTC1-204ENST00000578441 CDK7P50613 346 aa12□□□□□ -0.49
CTC1-204ENST00000578441 SLFN13Q68D06 897 aa12□□□□□ -0.49
CTC1-204ENST00000578441 MFSD5Q6N075 450 aa12□□□□□ -0.49
CTC1-204ENST00000578441 CCDC129Q6ZRS4 1044 aa12□□□□□ -0.49
CTC1-204ENST00000578441 ARMCX2Q7L311 632 aa12□□□□□ -0.49
CTC1-204ENST00000578441 TICAM2Q86XR7 235 aa12□□□□□ -0.49
CTC1-204ENST00000578441 ATXN2LQ8WWM7 1075 aaKnown RBP12□□□□□ -0.49
CTC1-204ENST00000578441 NAPBQ9H115 298 aa12□□□□□ -0.49
CTC1-204ENST00000578441 ACAD9Q9H845 621 aa12□□□□□ -0.49
CTC1-204ENST00000578441 RAVER2Q9HCJ3 691 aaKnown RBP12□□□□□ -0.49
CTC1-204ENST00000578441 ARIH1Q9Y4X5 557 aaPredicted RBP12□□□□□ -0.49
CTC1-204ENST00000578441 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.99□□□□□ -0.49
CTC1-204ENST00000578441 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.99□□□□□ -0.49
CTC1-204ENST00000578441 ASB14A6NK59 587 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 PRDM1O75626 825 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 CABYRO75952 493 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 ASGR1P07306 291 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 SLC1A4P43007 532 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 PPARAQ07869 468 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 PPIGQ13427 754 aaKnown RBP eCLIP11.99□□□□□ -0.499e-7■■■□□ 17.4
CTC1-204ENST00000578441 CCDC144BQ3MJ40 725 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 ZMYM1Q5SVZ6 1142 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 CCDC144CPQ8IYA2 1237 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 FAM133AQ8N9E0 248 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 PI4K2BQ8TCG2 481 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 STAG1Q8WVM7 1258 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 LENG1Q96BZ8 264 aaPredicted RBP11.99□□□□□ -0.49
CTC1-204ENST00000578441 FGD4Q96M96 766 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 MCM3APO60318 1980 aa11.99□□□□□ -0.49
CTC1-204ENST00000578441 LOC102724159A0A0B4J2E5 919 aa11.98□□□□□ -0.49
CTC1-204ENST00000578441 TMEM232C9JQI7 657 aa11.98□□□□□ -0.49
CTC1-204ENST00000578441 ARVCFO00192 962 aa11.98□□□□□ -0.49
CTC1-204ENST00000578441 TLR3O15455 904 aaKnown RBP11.98□□□□□ -0.49
CTC1-204ENST00000578441 EPHB4P54760 987 aa11.98□□□□□ -0.49
CTC1-204ENST00000578441 TFAP4Q01664 338 aa11.98□□□□□ -0.49
CTC1-204ENST00000578441 PWP2Q15269 919 aaKnown RBP11.98□□□□□ -0.49
CTC1-204ENST00000578441 GNASQ5JWF2 1037 aa11.98□□□□□ -0.49
CTC1-204ENST00000578441 PSRC1Q6PGN9 363 aaPredicted RBP11.98□□□□□ -0.49
CTC1-204ENST00000578441 STK11IPQ8N1F8 1099 aa11.98□□□□□ -0.49
CTC1-204ENST00000578441 LRRC47Q8N1G4 583 aaKnown RBP11.98□□□□□ -0.49
CTC1-204ENST00000578441 TMEM199Q8N511 208 aa11.98□□□□□ -0.49
CTC1-204ENST00000578441 FSD1Q9BTV5 496 aa11.98□□□□□ -0.49
CTC1-204ENST00000578441 KATNBL1Q9H079 304 aa11.98□□□□□ -0.49
CTC1-204ENST00000578441 LRRC37A2A6NM11 1700 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 ZNF536O15090 1300 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 MX1P20591 662 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 DNAJB2P25686 324 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 SLC4A3P48751 1232 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 AKNAD1Q5T1N1 836 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 TSHZ3Q63HK5 1081 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 RCSD1Q6JBY9 416 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 FAM126BQ8IXS8 530 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 SLC43A3Q8NBI5 491 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 A1CFQ9NQ94 594 aaKnown RBP11.97□□□□□ -0.49
CTC1-204ENST00000578441 RNF146Q9NTX7 359 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 ANAPC4Q9UJX5 808 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 PNMA2Q9UL42 364 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.97□□□□□ -0.49
CTC1-204ENST00000578441 Q9Y3F1 56 aa11.97□□□□□ -0.49
CTC1-204ENST00000578441 MYADML2A6NDP7 307 aa11.96□□□□□ -0.49
CTC1-204ENST00000578441 TSPY2A6NKD2 308 aa11.96□□□□□ -0.49
CTC1-204ENST00000578441 ADCY6O43306 1168 aa11.96□□□□□ -0.49
CTC1-204ENST00000578441 CD4P01730 458 aa11.96□□□□□ -0.49
CTC1-204ENST00000578441 NOVP48745 357 aa11.96□□□□□ -0.49
CTC1-204ENST00000578441 CNTN2Q02246 1040 aa11.96□□□□□ -0.49
CTC1-204ENST00000578441 TNFAIP2Q03169 654 aa11.96□□□□□ -0.49
CTC1-204ENST00000578441 IKQ13123 557 aaPredicted RBP11.96□□□□□ -0.49
CTC1-204ENST00000578441 RASIP1Q5U651 963 aa11.96□□□□□ -0.49
CTC1-204ENST00000578441 FAM122AQ96E09 287 aa11.96□□□□□ -0.49
CTC1-204ENST00000578441 SEC62Q99442 399 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms