RNA–Protein interactions for RNA: ENST00000567549.2

LINC01238-205, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

BASIC

Gene LINC01238, Length 1,107 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-205ENST00000567549 POTEB2H3BUK9 544 aa21.99■■□□□ 1.11
LINC01238-205ENST00000567549 ORC4O43929 436 aa21.99■■□□□ 1.11
LINC01238-205ENST00000567549 PDE1AP54750 535 aa21.99■■□□□ 1.11
LINC01238-205ENST00000567549 MCMDC2Q4G0Z9 681 aa21.99■■□□□ 1.11
LINC01238-205ENST00000567549 GLT1D1Q96MS3 346 aa21.99■■□□□ 1.11
LINC01238-205ENST00000567549 TOX2Q96NM4 488 aa21.99■■□□□ 1.11
LINC01238-205ENST00000567549 RWDD1Q9H446 243 aaPredicted RBP21.99■■□□□ 1.11
LINC01238-205ENST00000567549 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.99■■□□□ 1.11
LINC01238-205ENST00000567549 SZT2Q5T011 3432 aa21.99■■□□□ 1.11
LINC01238-205ENST00000567549 DNAH12Q6ZR08 3092 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 SNAI1O95863 264 aaPredicted RBP21.98■■□□□ 1.11
LINC01238-205ENST00000567549 RAG1P15918 1043 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 MCCP23508 829 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 CST5P28325 142 aaPredicted RBP21.98■■□□□ 1.11
LINC01238-205ENST00000567549 ACLYP53396 1101 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 TLE2Q04725 743 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 CCDC174Q6PII3 467 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 DCAF4Q8WV16 495 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 CRBNQ96SW2 442 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 HOMER2Q9NSB8 354 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 RNF146Q9NTX7 359 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 ELP1O95163 1332 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 ZMYM6O95789 1325 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 SYNRGQ9UMZ2 1314 aa21.98■■□□□ 1.11
LINC01238-205ENST00000567549 ADAMTS4O75173 837 aa21.97■■□□□ 1.11
LINC01238-205ENST00000567549 TAL1P17542 331 aaPredicted RBP21.97■■□□□ 1.11
LINC01238-205ENST00000567549 CTDSPL2Q05D32 466 aa21.97■■□□□ 1.11
LINC01238-205ENST00000567549 ZNF697Q5TEC3 545 aa21.97■■□□□ 1.11
LINC01238-205ENST00000567549 ARMCX2Q7L311 632 aa21.97■■□□□ 1.11
LINC01238-205ENST00000567549 LAMA3Q16787 3333 aa21.96■■□□□ 1.11
LINC01238-205ENST00000567549 TRIM6-TRIM34B2RNG4 842 aa21.96■■□□□ 1.11
LINC01238-205ENST00000567549 C6orf222P0C671 652 aaPredicted RBP21.96■■□□□ 1.11
LINC01238-205ENST00000567549 CCDC96Q2M329 555 aa21.96■■□□□ 1.11
LINC01238-205ENST00000567549 ANKRD33Q7Z3H0 272 aa21.96■■□□□ 1.11
LINC01238-205ENST00000567549 BADQ92934 168 aa21.96■■□□□ 1.11
LINC01238-205ENST00000567549 SEZ6LQ9BYH1 1024 aa21.96■■□□□ 1.11
LINC01238-205ENST00000567549 RNF41Q9H4P4 317 aaPredicted RBP21.96■■□□□ 1.11
LINC01238-205ENST00000567549 TMEM39AQ9NV64 488 aa21.96■■□□□ 1.11
LINC01238-205ENST00000567549 MTMR10Q9NXD2 777 aa21.96■■□□□ 1.11
LINC01238-205ENST00000567549 KIAA0355O15063 1070 aa21.95■■□□□ 1.1
LINC01238-205ENST00000567549 PQBP1O60828 265 aaKnown RBP21.95■■□□□ 1.1
LINC01238-205ENST00000567549 ALAS1P13196 640 aa21.95■■□□□ 1.1
LINC01238-205ENST00000567549 CCDC144BQ3MJ40 725 aa21.95■■□□□ 1.1
LINC01238-205ENST00000567549 CCDC129Q6ZRS4 1044 aa21.95■■□□□ 1.1
LINC01238-205ENST00000567549 VTI1AQ96AJ9 217 aa21.95■■□□□ 1.1
LINC01238-205ENST00000567549 TRERF1Q96PN7 1200 aa21.95■■□□□ 1.1
LINC01238-205ENST00000567549 MPHOSPH6Q99547 160 aaKnown RBP21.95■■□□□ 1.1
LINC01238-205ENST00000567549 LOC102724159A0A0B4J2E5 919 aa21.94■■□□□ 1.1
LINC01238-205ENST00000567549 TLR3O15455 904 aaKnown RBP21.94■■□□□ 1.1
LINC01238-205ENST00000567549 ZEB2O60315 1214 aa21.94■■□□□ 1.1
LINC01238-205ENST00000567549 TOP1P11387 765 aaKnown RBP21.94■■□□□ 1.1
LINC01238-205ENST00000567549 GJA9P57773 515 aa21.94■■□□□ 1.1
LINC01238-205ENST00000567549 PWP2Q15269 919 aaKnown RBP21.94■■□□□ 1.1
LINC01238-205ENST00000567549 KCNA10Q16322 511 aa21.94■■□□□ 1.1
LINC01238-205ENST00000567549 NOL8Q76FK4 1167 aaKnown RBP21.94■■□□□ 1.1
LINC01238-205ENST00000567549 CCDC144CPQ8IYA2 1237 aa21.94■■□□□ 1.1
LINC01238-205ENST00000567549 KLHDC9Q8NEP7 349 aa21.94■■□□□ 1.1
LINC01238-205ENST00000567549 A1CFQ9NQ94 594 aaKnown RBP21.94■■□□□ 1.1
LINC01238-205ENST00000567549 TCP11L1Q9NUJ3 509 aa21.94■■□□□ 1.1
LINC01238-205ENST00000567549 ADD3Q9UEY8 706 aaKnown RBP21.94■■□□□ 1.1
LINC01238-205ENST00000567549 A0A0U1RQG5 324 aaPredicted RBP21.93■■□□□ 1.1
LINC01238-205ENST00000567549 HIP1O00291 1037 aa21.93■■□□□ 1.1
LINC01238-205ENST00000567549 CABYRO75952 493 aa21.93■■□□□ 1.1
LINC01238-205ENST00000567549 FGRP09769 529 aa21.93■■□□□ 1.1
LINC01238-205ENST00000567549 SMAD3P84022 425 aaKnown RBP21.93■■□□□ 1.1
LINC01238-205ENST00000567549 FPGSQ05932 587 aa21.93■■□□□ 1.1
LINC01238-205ENST00000567549 CCDC178Q5BJE1 867 aa21.93■■□□□ 1.1
LINC01238-205ENST00000567549 GNASQ5JWF2 1037 aa21.93■■□□□ 1.1
LINC01238-205ENST00000567549 KCTD1Q719H9 257 aa21.93■■□□□ 1.1
LINC01238-205ENST00000567549 FAM133AQ8N9E0 248 aa21.93■■□□□ 1.1
LINC01238-205ENST00000567549 TTC14Q96N46 770 aa21.93■■□□□ 1.1
LINC01238-205ENST00000567549 UPF3AQ9H1J1 476 aaKnown RBP21.93■■□□□ 1.1
LINC01238-205ENST00000567549 CCPG1Q9ULG6 757 aa21.93■■□□□ 1.1
LINC01238-205ENST00000567549 PRR12Q9ULL5 1215 aa21.93■■□□□ 1.1
LINC01238-205ENST00000567549 MCM3APO60318 1980 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 CCDC171Q6TFL3 1326 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 TRIM43BA6NCK2 446 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 FGAP02671 866 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 ICAM1P05362 532 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 TNFAIP2Q03169 654 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 SHHQ15465 462 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 RRP12Q5JTH9 1297 aaKnown RBP21.92■■□□□ 1.1
LINC01238-205ENST00000567549 MFSD6Q6ZSS7 791 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 Q7L0L9 218 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 RILPL2Q969X0 211 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 TRIM43Q96BQ3 446 aaPredicted RBP21.92■■□□□ 1.1
LINC01238-205ENST00000567549 AGBL1Q96MI9 1066 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 AP5M1Q9H0R1 490 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 IL17RBQ9NRM6 502 aa21.92■■□□□ 1.1
LINC01238-205ENST00000567549 B4DLN1 442 aa21.91■■□□□ 1.1
LINC01238-205ENST00000567549 ASGR1P07306 291 aa21.91■■□□□ 1.1
LINC01238-205ENST00000567549 NOVP48745 357 aa21.91■■□□□ 1.1
LINC01238-205ENST00000567549 MRPL12P52815 198 aaKnown RBP21.91■■□□□ 1.1
LINC01238-205ENST00000567549 LENG1Q96BZ8 264 aaPredicted RBP21.91■■□□□ 1.1
LINC01238-205ENST00000567549 RNPC3Q96LT9 517 aaKnown RBP21.91■■□□□ 1.1
LINC01238-205ENST00000567549 ZNF536O15090 1300 aa21.9■■□□□ 1.1
LINC01238-205ENST00000567549 TMEM265A0A087WTH1 108 aa21.9■■□□□ 1.1
LINC01238-205ENST00000567549 FOXP2O15409 715 aa21.9■■□□□ 1.1
LINC01238-205ENST00000567549 HSPD1P10809 573 aaKnown RBP21.9■■□□□ 1.1
LINC01238-205ENST00000567549 VPS53Q5VIR6 699 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms