RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SH2B2O14492 632 aaPredicted RBP18.51■□□□□ 0.55
RABGGTA-206ENST00000558649 HMGCRP04035 888 aa18.51■□□□□ 0.55
RABGGTA-206ENST00000558649 PGK2P07205 417 aa18.51■□□□□ 0.55
RABGGTA-206ENST00000558649 TRIM32Q13049 653 aa18.51■□□□□ 0.55
RABGGTA-206ENST00000558649 CATIPQ7Z7H3 387 aa18.51■□□□□ 0.55
RABGGTA-206ENST00000558649 STAG2Q8N3U4 1231 aa18.51■□□□□ 0.55
RABGGTA-206ENST00000558649 NPLOC4Q8TAT6 608 aa18.51■□□□□ 0.55
RABGGTA-206ENST00000558649 NUP133Q8WUM0 1156 aa18.51■□□□□ 0.55
RABGGTA-206ENST00000558649 TMEM87BQ96K49 555 aa18.51■□□□□ 0.55
RABGGTA-206ENST00000558649 JAKMIP1Q96N16 626 aaKnown RBP18.51■□□□□ 0.55
RABGGTA-206ENST00000558649 RANBP17Q9H2T7 1088 aaKnown RBP18.51■□□□□ 0.55
RABGGTA-206ENST00000558649 RBBP6Q7Z6E9 1792 aaKnown RBP18.5■□□□□ 0.55
RABGGTA-206ENST00000558649 XRCC5P13010 732 aaKnown RBP18.5■□□□□ 0.55
RABGGTA-206ENST00000558649 CCL5P13501 91 aa18.5■□□□□ 0.55
RABGGTA-206ENST00000558649 CPA1P15085 419 aa18.5■□□□□ 0.55
RABGGTA-206ENST00000558649 TSGA10IPQ3SY00 556 aa18.5■□□□□ 0.55
RABGGTA-206ENST00000558649 RAB11FIP4Q86YS3 637 aa18.5■□□□□ 0.55
RABGGTA-206ENST00000558649 ZNF654Q8IZM8 581 aa18.5■□□□□ 0.55
RABGGTA-206ENST00000558649 TMEM106CQ9BVX2 250 aa18.5■□□□□ 0.55
RABGGTA-206ENST00000558649 VAT1LQ9HCJ6 419 aa18.5■□□□□ 0.55
RABGGTA-206ENST00000558649 RNF146Q9NTX7 359 aa18.5■□□□□ 0.55
RABGGTA-206ENST00000558649 MYH6P13533 1939 aa18.5■□□□□ 0.55
RABGGTA-206ENST00000558649 COBLO75128 1261 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 ICAM1P05362 532 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 GRM4Q14833 912 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 ADGRF4Q8IZF3 695 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 ABRAQ8N0Z2 381 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 ANKRD35Q8N283 1001 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 TRERF1Q96PN7 1200 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 USP26Q9BXU7 913 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 RNF208Q9H0X6 261 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 UNC93B1Q9H1C4 597 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 SLC5A4Q9NY91 659 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 FLRT1Q9NZU1 646 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 MAD2L2Q9UI95 211 aa18.49■□□□□ 0.55
RABGGTA-206ENST00000558649 POTEFA5A3E0 1075 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 KLRF2D3W0D1 207 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 RXRAP19793 462 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 FGD1P98174 961 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 CDC37Q16543 378 aaPredicted RBP18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 USH1GQ495M9 461 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 DHX32Q7L7V1 743 aaKnown RBP18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 CCDC144CPQ8IYA2 1237 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 TRMT44Q8IYL2 757 aaKnown RBP18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 CHST13Q8NET6 341 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 KCNB2Q92953 911 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 DDX11Q96FC9 970 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 MTA3Q9BTC8 594 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 ACAD9Q9H845 621 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 FBXO40Q9UH90 709 aa18.48■□□□□ 0.55
RABGGTA-206ENST00000558649 HMGB1P09429 215 aaKnown RBP18.47■□□□□ 0.55
RABGGTA-206ENST00000558649 HOXC6P09630 235 aa18.47■□□□□ 0.55
RABGGTA-206ENST00000558649 PRKAR2AP13861 404 aaKnown RBP18.47■□□□□ 0.55
RABGGTA-206ENST00000558649 TROAPQ12815 778 aa18.47■□□□□ 0.55
RABGGTA-206ENST00000558649 MUM1L1Q5H9M0 696 aa18.47■□□□□ 0.55
RABGGTA-206ENST00000558649 BLOC1S2Q6QNY1 142 aa18.47■□□□□ 0.55
RABGGTA-206ENST00000558649 SLC12A7Q9Y666 1083 aa18.47■□□□□ 0.55
RABGGTA-206ENST00000558649 SMCHD1A6NHR9 2005 aa18.47■□□□□ 0.55
RABGGTA-206ENST00000558649 CENPFP49454 3210 aa18.47■□□□□ 0.55
RABGGTA-206ENST00000558649 PALM3A6NDB9 673 aaPredicted RBP18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 DDAH1O94760 285 aa18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 CASTP20810 708 aaKnown RBP18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 CYP2C19P33261 490 aa18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 LIFRP42702 1097 aa18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 EXOSC10Q01780 885 aaKnown RBP18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 TKFCQ3LXA3 575 aa18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 MFSD14CQ5VZR4 134 aa18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 MICU3Q86XE3 530 aa18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 TMTC2Q8N394 836 aa18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 CTCFLQ8NI51 663 aaPredicted RBP18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 JMJD4Q9H9V9 463 aa18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 NAP1L2Q9ULW6 460 aaPredicted RBP18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 WDR19Q8NEZ3 1342 aa18.46■□□□□ 0.55
RABGGTA-206ENST00000558649 EPB41L2O43491 1005 aaKnown RBP18.45■□□□□ 0.54
RABGGTA-206ENST00000558649 PSMA5P28066 241 aa18.45■□□□□ 0.54
RABGGTA-206ENST00000558649 CACNB2Q08289 660 aaPredicted RBP18.45■□□□□ 0.54
RABGGTA-206ENST00000558649 QRICH1Q2TAL8 776 aa18.45■□□□□ 0.54
RABGGTA-206ENST00000558649 NSMFQ6X4W1 530 aa18.45■□□□□ 0.54
RABGGTA-206ENST00000558649 HOMER1Q86YM7 354 aa18.45■□□□□ 0.54
RABGGTA-206ENST00000558649 PIBF1Q8WXW3 757 aa18.45■□□□□ 0.54
RABGGTA-206ENST00000558649 MAML3Q96JK9 1138 aa18.45■□□□□ 0.54
RABGGTA-206ENST00000558649 GTF3C3Q9Y5Q9 886 aa18.45■□□□□ 0.54
RABGGTA-206ENST00000558649 NFIBO00712 420 aa18.44■□□□□ 0.54
RABGGTA-206ENST00000558649 KIF5BP33176 963 aa18.44■□□□□ 0.54
RABGGTA-206ENST00000558649 ZNF792Q3KQV3 632 aa18.44■□□□□ 0.54
RABGGTA-206ENST00000558649 SYNE3Q6ZMZ3 975 aa18.44■□□□□ 0.54
RABGGTA-206ENST00000558649 Q6ZUG5 572 aa18.44■□□□□ 0.54
RABGGTA-206ENST00000558649 DEFB118Q96PH6 123 aa18.44■□□□□ 0.54
RABGGTA-206ENST00000558649 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.44■□□□□ 0.54
RABGGTA-206ENST00000558649 HMX1Q9NP08 348 aaPredicted RBP18.44■□□□□ 0.54
RABGGTA-206ENST00000558649 A1CFQ9NQ94 594 aaKnown RBP18.44■□□□□ 0.54
RABGGTA-206ENST00000558649 RPTORQ8N122 1335 aa18.44■□□□□ 0.54
RABGGTA-206ENST00000558649 PTPDC1A2A3K4 754 aa18.43■□□□□ 0.54
RABGGTA-206ENST00000558649 CALM1P0DP23 149 aa18.43■□□□□ 0.54
RABGGTA-206ENST00000558649 CALM2P0DP24 149 aa18.43■□□□□ 0.54
RABGGTA-206ENST00000558649 CALM3P0DP25 149 aa18.43■□□□□ 0.54
RABGGTA-206ENST00000558649 EN2P19622 333 aaPredicted RBP18.43■□□□□ 0.54
RABGGTA-206ENST00000558649 RPS6KB1P23443 525 aa18.43■□□□□ 0.54
RABGGTA-206ENST00000558649 CNGA1P29973 690 aa18.43■□□□□ 0.54
RABGGTA-206ENST00000558649 CCND3P30281 292 aaPredicted RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms