RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 PPM1EQ8WY54 764 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 STRBPQ96SI9 672 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 TSEN34Q9BSV6 310 aaKnown RBP5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 PAGR1Q9BTK6 254 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 ARHGEF10LQ9HCE6 1279 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 ECHDC1Q9NTX5 307 aa5.33□□□□□ -1.56
TMEM106C-220ENST00000552561 PLXNA1Q9UIW2 1896 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 COL11A1P12107 1806 aaPredicted RBP5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 ATRXP46100 2492 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 SALL3Q9BXA9 1300 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 LOC102724159A0A0B4J2E5 919 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 GSG1L2A8MUP6 293 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 KIAA0355O15063 1070 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 MBD4O95243 580 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 FGRP09769 529 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 IFIT2P09913 472 aaKnown RBP5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 ZNF865P0CJ78 1059 aaPredicted RBP5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 FCER1AP12319 257 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 GNAT2P19087 354 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 CYP2C19P33261 490 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 PBX2P40425 430 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 NT5C2P49902 561 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 PWP2Q15269 919 aaKnown RBP5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 LRRC41Q15345 812 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 CCAR1Q8IX12 1150 aaKnown RBP5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 SLC44A5Q8NCS7 719 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 GMCL1P1Q8NEA9 526 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 KLHDC9Q8NEP7 349 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 APPBP2Q92624 585 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 ATG4CQ96DT6 458 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 UIMC1Q96RL1 719 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 TINF2Q9BSI4 451 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 TEX13BQ9BXU2 312 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 SEZ6LQ9BYH1 1024 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 LRRCC1Q9C099 1032 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 PUS7LQ9H0K6 701 aaKnown RBP5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 ARMT1Q9H993 441 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 LHX6Q9UPM6 363 aa5.32□□□□□ -1.56
TMEM106C-220ENST00000552561 ANKRD11Q6UB99 2663 aaPredicted RBP5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 ELP1O95163 1332 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 TTC41PQ6P2S7 1318 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 MOXD2PA6NHM9 499 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 F5H6K3 240 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 PRKAB2O43741 272 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 GPR37L1O60883 481 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 FLOT1O75955 427 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 NEFLP07196 543 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 CYP2D6P10635 497 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 EEF2P13639 858 aaKnown RBP5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 AKR1A1P14550 325 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 RASA1P20936 1047 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 STAT3P40763 770 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 CDK7P50613 346 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 RTP1P59025 263 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 KLRC3Q07444 240 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 ZYXQ15942 572 aaKnown RBP5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 AKNAD1Q5T1N1 836 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 RASIP1Q5U651 963 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 DPP9Q86TI2 863 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 AMOTL1Q8IY63 956 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 PRPF38AQ8NAV1 312 aaKnown RBP5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 SLC43A3Q8NBI5 491 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 CHST13Q8NET6 341 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 NEDD1Q8NHV4 660 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 DYNLL2Q96FJ2 89 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 DDRGK1Q96HY6 314 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 GMCL1Q96IK5 515 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 FGD4Q96M96 766 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 MAF1Q9H063 256 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 KATNBL1Q9H079 304 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 UPF3AQ9H1J1 476 aaKnown RBP5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 BOLA2Q9H3K6 86 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 SLC38A10Q9HBR0 1119 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 ZNF287Q9HBT7 754 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 GOPCQ9HD26 462 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 PDLIM7Q9NR12 457 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 MTMR4Q9NYA4 1195 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 RCAN3Q9UKA8 241 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 COG6Q9Y2V7 657 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 PCDHGA4Q9Y5G9 962 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 TACC3Q9Y6A5 838 aa5.31□□□□□ -1.56
TMEM106C-220ENST00000552561 CHD9Q3L8U1 2897 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 ZMYM6O95789 1325 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 TRIM43BA6NCK2 446 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 PRR33A8MZF0 331 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 KBTBD13C9JR72 458 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 SMIM22K7EJ46 135 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 FOXP2O15409 715 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 DUSP11O75319 330 aaKnown RBP5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 SNAI1O95863 264 aaPredicted RBP5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 NDUFB10O96000 172 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 CHGBP05060 677 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 RARBP10826 455 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 RRP1P56182 461 aaKnown RBP5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 NHLH1Q02575 133 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 KCTD2Q14681 263 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 SKIV2LQ15477 1246 aaKnown RBP5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 LRRFIP1Q32MZ4 808 aaKnown RBP5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 FAM47AQ5JRC9 791 aa5.3□□□□□ -1.56
TMEM106C-220ENST00000552561 PPP4R3BQ5MIZ7 849 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms