RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 MAD2L2Q9UI95 211 aa19.5■□□□□ 0.71
UBC-208ENST00000540700 ALPK3Q96L96 1907 aa19.5■□□□□ 0.71
UBC-208ENST00000540700 DOCK3Q8IZD9 2030 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 PARP14Q460N5 1801 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 KLF18A0A0U1RQI7 1052 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 USP17L15C9J2P7 530 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 USP17L13C9JLJ4 530 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 USP17L11C9JVI0 530 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 USP17L18D6R9N7 530 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 USP17L22D6RA61 530 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 USP17L17D6RBQ6 530 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 USP17L19D6RCP7 530 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 USP17L20D6RJB6 530 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 CD2BP2O95400 341 aaKnown RBP19.49■□□□□ 0.71
UBC-208ENST00000540700 SLC1A4P43007 532 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 USP17L24Q0WX57 530 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 GRM4Q14833 912 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 NFXL1Q6ZNB6 911 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 TANGO6Q9C0B7 1094 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 ALDH8A1Q9H2A2 487 aaPredicted RBP19.49■□□□□ 0.71
UBC-208ENST00000540700 GPCPD1Q9NPB8 672 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 GJD2Q9UKL4 321 aa19.49■□□□□ 0.71
UBC-208ENST00000540700 CCDC69A6NI79 296 aa19.48■□□□□ 0.71
UBC-208ENST00000540700 SPDYE16A6NNV3 312 aaPredicted RBP19.48■□□□□ 0.71
UBC-208ENST00000540700 SLC16A2P36021 539 aa19.48■□□□□ 0.71
UBC-208ENST00000540700 GCLCP48506 637 aaPredicted RBP19.48■□□□□ 0.71
UBC-208ENST00000540700 EVCP57679 992 aa19.48■□□□□ 0.71
UBC-208ENST00000540700 CCDC96Q2M329 555 aa19.48■□□□□ 0.71
UBC-208ENST00000540700 CCDC144CPQ8IYA2 1237 aa19.48■□□□□ 0.71
UBC-208ENST00000540700 NUP133Q8WUM0 1156 aa19.48■□□□□ 0.71
UBC-208ENST00000540700 FAM217BQ9NTX9 383 aaPredicted RBP19.48■□□□□ 0.71
UBC-208ENST00000540700 TPCN1Q9ULQ1 816 aa19.48■□□□□ 0.71
UBC-208ENST00000540700 PALM3A6NDB9 673 aaPredicted RBP19.47■□□□□ 0.71
UBC-208ENST00000540700 TMEM232C9JQI7 657 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 CNMDO75829 334 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 DDAH1O94760 285 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 LARGE1O95461 756 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 CYP2B6P20813 491 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 CATIPQ7Z7H3 387 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 MICU3Q86XE3 530 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 TMTC2Q8N394 836 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 TRIB2Q92519 343 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 ATG4CQ96DT6 458 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 SLC12A7Q9Y666 1083 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 A0A0G2JMZ2 1700 aa19.47■□□□□ 0.71
UBC-208ENST00000540700 FLOT1O75955 427 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 PLEKHA8P1O95397 391 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 CDC27P30260 824 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 DSG3P32926 999 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 HERVK_113P62684 666 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 FGD1P98174 961 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 PABPC4Q13310 644 aaKnown RBP eCLIP19.46■□□□□ 0.71
UBC-208ENST00000540700 RABEP1Q15276 862 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 BTNL9Q6UXG8 535 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 NOL8Q76FK4 1167 aaKnown RBP19.46■□□□□ 0.71
UBC-208ENST00000540700 REPS2Q8NFH8 660 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 COL25A1Q9BXS0 654 aaPredicted RBP19.46■□□□□ 0.71
UBC-208ENST00000540700 UBA5Q9GZZ9 404 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 TXNRD2Q9NNW7 524 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 OGDHLQ9ULD0 1010 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 PPP1R9AQ9ULJ8 1098 aa19.46■□□□□ 0.71
UBC-208ENST00000540700 LAMA2P24043 3122 aaKnown RBP19.46■□□□□ 0.71
UBC-208ENST00000540700 NID2Q14112 1375 aa19.45■□□□□ 0.7
UBC-208ENST00000540700 GOLGA8BA8MQT2 603 aa19.45■□□□□ 0.7
UBC-208ENST00000540700 PARP1P09874 1014 aaKnown RBP19.45■□□□□ 0.7
UBC-208ENST00000540700 PRKAR2AP13861 404 aaKnown RBP19.45■□□□□ 0.7
UBC-208ENST00000540700 PDIA3P30101 505 aaKnown RBP19.45■□□□□ 0.7
UBC-208ENST00000540700 SNAP25P60880 206 aa19.45■□□□□ 0.7
UBC-208ENST00000540700 IRX3P78415 501 aaPredicted RBP19.45■□□□□ 0.7
UBC-208ENST00000540700 ST3GAL1Q11201 340 aa19.45■□□□□ 0.7
UBC-208ENST00000540700 SAMD1Q6SPF0 538 aaPredicted RBP19.45■□□□□ 0.7
UBC-208ENST00000540700 SLF1Q9BQI6 1058 aa19.45■□□□□ 0.7
UBC-208ENST00000540700 FEM1BQ9UK73 627 aa19.45■□□□□ 0.7
UBC-208ENST00000540700 ISY1Q9ULR0 285 aaKnown RBP19.45■□□□□ 0.7
UBC-208ENST00000540700 ADAMTS5Q9UNA0 930 aa19.45■□□□□ 0.7
UBC-208ENST00000540700 PFASO15067 1338 aa19.45■□□□□ 0.7
UBC-208ENST00000540700 ZBTB43O43298 467 aa19.44■□□□□ 0.7
UBC-208ENST00000540700 CYTH3O43739 400 aa19.44■□□□□ 0.7
UBC-208ENST00000540700 PLA2G6O60733 806 aa19.44■□□□□ 0.7
UBC-208ENST00000540700 TAL1P17542 331 aaPredicted RBP19.44■□□□□ 0.7
UBC-208ENST00000540700 MDM2Q00987 491 aaPredicted RBP19.44■□□□□ 0.7
UBC-208ENST00000540700 COG2Q14746 738 aa19.44■□□□□ 0.7
UBC-208ENST00000540700 ASPRV1Q53RT3 343 aa19.44■□□□□ 0.7
UBC-208ENST00000540700 CMTR1Q8N1G2 835 aaKnown RBP19.44■□□□□ 0.7
UBC-208ENST00000540700 KIFC2Q96AC6 838 aa19.44■□□□□ 0.7
UBC-208ENST00000540700 MAP3K14Q99558 947 aa19.44■□□□□ 0.7
UBC-208ENST00000540700 NCOA5Q9HCD5 579 aaKnown RBP19.44■□□□□ 0.7
UBC-208ENST00000540700 BTBD7Q9P203 1132 aa19.44■□□□□ 0.7
UBC-208ENST00000540700 RBPJLQ9UBG7 517 aa19.44■□□□□ 0.7
UBC-208ENST00000540700 PRR12Q9ULL5 1215 aa19.44■□□□□ 0.7
UBC-208ENST00000540700 GOLGA8AA7E2F4 631 aa19.43■□□□□ 0.7
UBC-208ENST00000540700 DTNBO60941 627 aa19.43■□□□□ 0.7
UBC-208ENST00000540700 STAT2P52630 851 aa19.43■□□□□ 0.7
UBC-208ENST00000540700 ME3Q16798 604 aa19.43■□□□□ 0.7
UBC-208ENST00000540700 SYDE2Q5VT97 1194 aa19.43■□□□□ 0.7
UBC-208ENST00000540700 LBX2Q6XYB7 198 aa19.43■□□□□ 0.7
UBC-208ENST00000540700 SRBD1Q8N5C6 995 aaKnown RBP19.43■□□□□ 0.7
UBC-208ENST00000540700 FANCBQ8NB91 859 aa19.43■□□□□ 0.7
UBC-208ENST00000540700 NAP1L2Q9ULW6 460 aaPredicted RBP19.43■□□□□ 0.7
UBC-208ENST00000540700 KLRF2D3W0D1 207 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms