RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 KBTBD4Q9NVX7 518 aa20.24■□□□□ 0.83
GNE-204ENST00000539208 PHLPP2Q6ZVD8 1323 aa20.23■□□□□ 0.83
GNE-204ENST00000539208 GOLGA6L9A6NEM1 432 aa20.23■□□□□ 0.83
GNE-204ENST00000539208 TEX33O43247 280 aa20.23■□□□□ 0.83
GNE-204ENST00000539208 PDE6BP35913 854 aa20.23■□□□□ 0.83
GNE-204ENST00000539208 SYT10Q6XYQ8 523 aa20.23■□□□□ 0.83
GNE-204ENST00000539208 NEK8Q86SG6 692 aa20.23■□□□□ 0.83
GNE-204ENST00000539208 ERO1AQ96HE7 468 aa20.23■□□□□ 0.83
GNE-204ENST00000539208 TTF2Q9UNY4 1162 aaKnown RBP20.23■□□□□ 0.83
GNE-204ENST00000539208 AKR1B15C9JRZ8 316 aaPredicted RBP20.22■□□□□ 0.83
GNE-204ENST00000539208 OR52Z1P0C646 297 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 ADKP55263 362 aaKnown RBP20.22■□□□□ 0.83
GNE-204ENST00000539208 PICALMQ13492 652 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 TRIM65Q6PJ69 517 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 DPP8Q6V1X1 898 aaPredicted RBP20.22■□□□□ 0.83
GNE-204ENST00000539208 HOMER1Q86YM7 354 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 PDCL2Q8N4E4 241 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 AKT1S1Q96B36 256 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 DDX4Q9NQI0 724 aaKnown RBP20.22■□□□□ 0.83
GNE-204ENST00000539208 PPP2R2CQ9Y2T4 447 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 ITIH6Q6UXX5 1313 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 PLSCR1O15162 318 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 SLU7O95391 586 aaKnown RBP20.22■□□□□ 0.83
GNE-204ENST00000539208 CCDC93Q567U6 631 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 CCDC94Q9BW85 323 aaPredicted RBP20.22■□□□□ 0.83
GNE-204ENST00000539208 USP40Q9NVE5 1235 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 SERPINB13Q9UIV8 391 aa20.22■□□□□ 0.83
GNE-204ENST00000539208 AKR1B1P15121 316 aa20.21■□□□□ 0.83
GNE-204ENST00000539208 COL23A1Q86Y22 540 aaPredicted RBP20.21■□□□□ 0.83
GNE-204ENST00000539208 NELFBQ8WX92 580 aa20.21■□□□□ 0.83
GNE-204ENST00000539208 NAA15Q9BXJ9 866 aaKnown RBP20.21■□□□□ 0.83
GNE-204ENST00000539208 ZNF215Q9UL58 517 aaPredicted RBP20.21■□□□□ 0.83
GNE-204ENST00000539208 PP2D1A8MPX8 630 aa20.21■□□□□ 0.83
GNE-204ENST00000539208 CCNT1O60563 726 aaKnown RBP20.21■□□□□ 0.83
GNE-204ENST00000539208 LETM2Q2VYF4 491 aa20.21■□□□□ 0.83
GNE-204ENST00000539208 PPFIBP1Q86W92 1011 aa20.21■□□□□ 0.83
GNE-204ENST00000539208 ADSSL1Q8N142 457 aa20.21■□□□□ 0.83
GNE-204ENST00000539208 REXO1Q8N1G1 1221 aaKnown RBP20.21■□□□□ 0.83
GNE-204ENST00000539208 IGSF22Q8N9C0 903 aa20.21■□□□□ 0.83
GNE-204ENST00000539208 FLAD1Q8NFF5 587 aa20.21■□□□□ 0.83
GNE-204ENST00000539208 VAT1LQ9HCJ6 419 aa20.21■□□□□ 0.83
GNE-204ENST00000539208 H7C1D1 291 aa20.2■□□□□ 0.82
GNE-204ENST00000539208 TTLL1O95922 423 aa20.2■□□□□ 0.82
GNE-204ENST00000539208 PRCPP42785 496 aa20.2■□□□□ 0.82
GNE-204ENST00000539208 RASSF8Q8NHQ8 419 aa20.2■□□□□ 0.82
GNE-204ENST00000539208 MASTLQ96GX5 879 aa20.2■□□□□ 0.82
GNE-204ENST00000539208 UBA5Q9GZZ9 404 aa20.2■□□□□ 0.82
GNE-204ENST00000539208 F8W031 263 aaPredicted RBP20.19■□□□□ 0.82
GNE-204ENST00000539208 KLRC4O43908 158 aa20.19■□□□□ 0.82
GNE-204ENST00000539208 RHOBTB3O94955 611 aa20.19■□□□□ 0.82
GNE-204ENST00000539208 KRT31Q15323 416 aa20.19■□□□□ 0.82
GNE-204ENST00000539208 ANKRD20A12PQ8NF67 263 aa20.19■□□□□ 0.82
GNE-204ENST00000539208 MRIQ9BWK5 157 aa20.19■□□□□ 0.82
GNE-204ENST00000539208 TMX4Q9H1E5 349 aaPredicted RBP20.19■□□□□ 0.82
GNE-204ENST00000539208 MYH8P13535 1937 aa20.19■□□□□ 0.82
GNE-204ENST00000539208 PPP1R18Q6NYC8 613 aa20.19■□□□□ 0.82
GNE-204ENST00000539208 CABP7Q86V35 215 aa20.19■□□□□ 0.82
GNE-204ENST00000539208 TBCKQ8TEA7 893 aa20.19■□□□□ 0.82
GNE-204ENST00000539208 TEKT1Q969V4 418 aa20.19■□□□□ 0.82
GNE-204ENST00000539208 CCDC51Q96ER9 411 aa20.19■□□□□ 0.82
GNE-204ENST00000539208 GTPBP4Q9BZE4 634 aaKnown RBP20.19■□□□□ 0.82
GNE-204ENST00000539208 SHMT1P34896 483 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 RBL2Q08999 1139 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 DOK7Q18PE1 504 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 TCP11X2Q5H9J9 407 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 PPP4R3BQ5MIZ7 849 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 APOBEC3HQ6NTF7 200 aaKnown RBP20.18■□□□□ 0.82
GNE-204ENST00000539208 CDC42EP5Q6NZY7 148 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 GIMAP8Q8ND71 665 aaPredicted RBP20.18■□□□□ 0.82
GNE-204ENST00000539208 EHD4Q9H223 541 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 CGNQ9P2M7 1197 aaKnown RBP20.18■□□□□ 0.82
GNE-204ENST00000539208 GDAQ9Y2T3 454 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 FRMPD2Q68DX3 1309 aaPredicted RBP20.18■□□□□ 0.82
GNE-204ENST00000539208 ZNF543Q08ER8 600 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 KMT5BQ4FZB7 885 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 GLIPR1L2Q4G1C9 344 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 PODNQ7Z5L7 613 aa20.18■□□□□ 0.82
GNE-204ENST00000539208 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.18■□□□□ 0.82
GNE-204ENST00000539208 COL11A2P13942 1736 aaPredicted RBP20.17■□□□□ 0.82
GNE-204ENST00000539208 HLA-DOAP06340 250 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 FECHP22830 423 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 COPB1P53618 953 aaKnown RBP20.17■□□□□ 0.82
GNE-204ENST00000539208 CNGA4Q8IV77 575 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 BIN2Q9UBW5 565 aaPredicted RBP20.17■□□□□ 0.82
GNE-204ENST00000539208 DNAI1Q9UI46 699 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 PARP3Q9Y6F1 533 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 GREB1LQ9C091 1923 aaPredicted RBP20.17■□□□□ 0.82
GNE-204ENST00000539208 PNMA6FA0A0J9YX94 578 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 KCNJ18B7U540 433 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 MFAP3LO75121 409 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 PLCG1P19174 1290 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 ADCY7P51828 1080 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 FKBP1AP62942 108 aaKnown RBP20.17■□□□□ 0.82
GNE-204ENST00000539208 STIM1Q13586 685 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 KCNJ12Q14500 433 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 NAA30Q147X3 362 aaPredicted RBP20.17■□□□□ 0.82
GNE-204ENST00000539208 TOGARAM2Q6ZUX3 1019 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 LRRC47Q8N1G4 583 aaKnown RBP20.17■□□□□ 0.82
GNE-204ENST00000539208 MTMR9Q96QG7 549 aa20.17■□□□□ 0.82
GNE-204ENST00000539208 C7orf25Q9BPX7 421 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms