RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 GJA9P57773 515 aa9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 PLCB2Q00722 1185 aa9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 SLFN13Q68D06 897 aa9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 LRRC47Q8N1G4 583 aaKnown RBP9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 CHST13Q8NET6 341 aa9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 SPDYE1Q8NFV5 336 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 PI4K2BQ8TCG2 481 aa9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 OTUD7AQ8TE49 926 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 ZBTB47Q9UFB7 747 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 ZHX1Q9UKY1 873 aaPredicted RBP9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 TBX21Q9UL17 535 aa9.96□□□□□ -0.82
CTNNA1-203ENST00000517534 MUC3AQ02505 3323 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 FOXP2O15409 715 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 APPP05067 770 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 BMP3P12645 472 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 SLC4A3P48751 1232 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 NKX3-2P78367 333 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 C16orf59Q7L2K0 433 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 ANKRD35Q8N283 1001 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 FAM133AQ8N9E0 248 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 NUP133Q8WUM0 1156 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 MYLIPQ8WY64 445 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 GPATCH3Q96I76 525 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 UPF3AQ9H1J1 476 aaKnown RBP9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 ABHD16BQ9H3Z7 469 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 ZNF287Q9HBT7 754 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 STARD7Q9NQZ5 370 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 PCDHB15Q9Y5E8 787 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 ELP1O95163 1332 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 LTBP2Q14767 1821 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 GREB1LQ9C091 1923 aaPredicted RBP9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 CHD9Q3L8U1 2897 aa9.95□□□□□ -0.82
CTNNA1-203ENST00000517534 PARP14Q460N5 1801 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 PLIN4Q96Q06 1357 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 ZNF536O15090 1300 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 TTC41PQ6P2S7 1318 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 TMEM265A0A087WTH1 108 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 DCDC2CA8MYV0 355 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 TMEM232C9JQI7 657 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 TIMP1P01033 207 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 TFAP4Q01664 338 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 CNTN2Q02246 1040 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 FPGSQ05932 587 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 CCDC144BQ3MJ40 725 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 ZMYM1Q5SVZ6 1142 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 ARMCX2Q7L311 632 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 CCDC144CPQ8IYA2 1237 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 MAFAQ8NHW3 353 aaPredicted RBP9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 GMCL1Q96IK5 515 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 RNPC3Q96LT9 517 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 A1CFQ9NQ94 594 aaKnown RBP9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 INCENPQ9NQS7 918 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 FBXO40Q9UH90 709 aa9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.94□□□□□ -0.82
CTNNA1-203ENST00000517534 ASTN1O14525 1302 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 SOWAHBA6NEL2 793 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 ARVCFO00192 962 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 PLA2G6O60733 806 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 ASGR1P07306 291 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 C6orf222P0C671 652 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 TSPY3P0CV98 308 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 TSPY8P0CW00 308 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 FDX1P10109 184 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 NOVP48745 357 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 PDE4BQ07343 736 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 PPARAQ07869 468 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 GRIN2CQ14957 1233 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 LRRFIP1Q32MZ4 808 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 TMEM240Q5SV17 173 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 RASIP1Q5U651 963 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 MFSD5Q6N075 450 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 PCSK9Q8NBP7 692 aaKnown RBP9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 STAG1Q8WVM7 1258 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 AGBL1Q96MI9 1066 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 GLT1D1Q96MS3 346 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.93□□□□□ -0.821e-7■■□□□ 11.9
CTNNA1-203ENST00000517534 NACAP1Q9BZK3 213 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 IL17RBQ9NRM6 502 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 HOMER2Q9NSB8 354 aa9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 CTDP1Q9Y5B0 961 aaPredicted RBP9.93□□□□□ -0.82
CTNNA1-203ENST00000517534 ZNFX1Q9P2E3 1918 aaKnown RBP9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 SALL3Q9BXA9 1300 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 ERC2O15083 957 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 CD4P01730 458 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 PTGS1P23219 599 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 MCCP23508 829 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 STAT2P52630 851 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 BEX3Q00994 111 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 GNASQ5JWF2 1037 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 TMEM63BQ5T3F8 832 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 CCDC129Q6ZRS4 1044 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 FAM160B2Q86V87 743 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 FAM126BQ8IXS8 530 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 SLC43A3Q8NBI5 491 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 CHURC1Q8WUH1 139 aa9.92□□□□□ -0.82
CTNNA1-203ENST00000517534 NAPBQ9H115 298 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms