RNA–Protein interactions for RNA: ENST00000491295.1

GGA1-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, human

TSL 4

Gene GGA1, Length 594 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GGA1-223	ENST00000491295	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	21.24	■□□□□ 0.99
GGA1-223	ENST00000491295	STX8	Q9UNK0	236 aa		21.24	■□□□□ 0.99
GGA1-223	ENST00000491295	LTBP2	Q14767	1821 aa		21.24	■□□□□ 0.99
GGA1-223	ENST00000491295	KIAA0355	O15063	1070 aa		21.23	■□□□□ 0.99
GGA1-223	ENST00000491295	FOXP2	O15409	715 aa		21.23	■□□□□ 0.99
GGA1-223	ENST00000491295	ORC4	O43929	436 aa		21.23	■□□□□ 0.99
GGA1-223	ENST00000491295	FGR	P09769	529 aa		21.23	■□□□□ 0.99
GGA1-223	ENST00000491295	CST5	P28325	142 aa	Predicted RBP	21.23	■□□□□ 0.99
GGA1-223	ENST00000491295	NOV	P48745	357 aa		21.23	■□□□□ 0.99
GGA1-223	ENST00000491295	IK	Q13123	557 aa	Predicted RBP	21.23	■□□□□ 0.99
GGA1-223	ENST00000491295	ZHX1	Q9UKY1	873 aa	Predicted RBP	21.23	■□□□□ 0.99
GGA1-223	ENST00000491295	SYNRG	Q9UMZ2	1314 aa		21.23	■□□□□ 0.99
GGA1-223	ENST00000491295	TRIM43B	A6NCK2	446 aa		21.22	■□□□□ 0.99
GGA1-223	ENST00000491295	MCC	P23508	829 aa		21.22	■□□□□ 0.99
GGA1-223	ENST00000491295	SHH	Q15465	462 aa		21.22	■□□□□ 0.99
GGA1-223	ENST00000491295	CCSAP	Q6IQ19	270 aa	Predicted RBP	21.22	■□□□□ 0.99
GGA1-223	ENST00000491295	SH3RF1	Q7Z6J0	888 aa		21.22	■□□□□ 0.99
GGA1-223	ENST00000491295	TRIM43	Q96BQ3	446 aa	Predicted RBP	21.22	■□□□□ 0.99
GGA1-223	ENST00000491295	STARD7	Q9NQZ5	370 aa		21.22	■□□□□ 0.99
GGA1-223	ENST00000491295	IL17RB	Q9NRM6	502 aa		21.22	■□□□□ 0.99
GGA1-223	ENST00000491295	ISY1	Q9ULR0	285 aa	Known RBP	21.22	■□□□□ 0.99
GGA1-223	ENST00000491295	ELP1	O95163	1332 aa		21.22	■□□□□ 0.99
GGA1-223	ENST00000491295	DCDC2C	A8MYV0	355 aa		21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	RANBP6	O60518	1105 aa	Known RBP	21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	NKX3-2	P78367	333 aa		21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	KCNA10	Q16322	511 aa		21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	CCDC144B	Q3MJ40	725 aa		21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	MCMDC2	Q4G0Z9	681 aa		21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	CCDC129	Q6ZRS4	1044 aa		21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	ARMCX2	Q7L311	632 aa		21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	FAM133A	Q8N9E0	248 aa		21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	GLT1D1	Q96MS3	346 aa		21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	CRBN	Q96SW2	442 aa		21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	MROH7	Q68CQ1	1323 aa		21.21	■□□□□ 0.99
GGA1-223	ENST00000491295	LAMA2	P24043	3122 aa	Known RBP	21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	ASB14	A6NK59	587 aa		21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	RAG1	P15918	1043 aa		21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	GJA9	P57773	515 aa		21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	CTDSPL2	Q05D32	466 aa		21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	CCDC144CP	Q8IYA2	1237 aa		21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	FGD4	Q96M96	766 aa		21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	UPF3A	Q9H1J1	476 aa	Known RBP	21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	HOMER2	Q9NSB8	354 aa		21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	RNF146	Q9NTX7	359 aa		21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	TMEM39A	Q9NV64	488 aa		21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	ZNF536	O15090	1300 aa		21.2	■□□□□ 0.98
GGA1-223	ENST00000491295	PQBP1	O60828	265 aa	Known RBP	21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	C6orf222	P0C671	652 aa	Predicted RBP	21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	PC	P11498	1178 aa	Known RBP	21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	SMAD3	P84022	425 aa	Known RBP	21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	VPS53	Q5VIR6	699 aa		21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	DCAF4	Q8WV16	495 aa		21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	LENG1	Q96BZ8	264 aa	Predicted RBP	21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	AGBL1	Q96MI9	1066 aa		21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	TRERF1	Q96PN7	1200 aa		21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	A1CF	Q9NQ94	594 aa	Known RBP	21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	TCP11L1	Q9NUJ3	509 aa		21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	ZMYM6	O95789	1325 aa		21.19	■□□□□ 0.98
GGA1-223	ENST00000491295	FGA	P02671	866 aa		21.18	■□□□□ 0.98
GGA1-223	ENST00000491295	FAAP100	Q0VG06	881 aa		21.18	■□□□□ 0.98
GGA1-223	ENST00000491295	C9orf50	Q5SZB4	431 aa		21.18	■□□□□ 0.98
GGA1-223	ENST00000491295	ZNF697	Q5TEC3	545 aa		21.18	■□□□□ 0.98
GGA1-223	ENST00000491295	KCTD1	Q719H9	257 aa		21.18	■□□□□ 0.98
GGA1-223	ENST00000491295	KATNBL1	Q9H079	304 aa		21.18	■□□□□ 0.98
GGA1-223	ENST00000491295	INCENP	Q9NQS7	918 aa		21.18	■□□□□ 0.98
GGA1-223	ENST00000491295	PNMA2	Q9UL42	364 aa		21.18	■□□□□ 0.98
GGA1-223	ENST00000491295	PRR12	Q9ULL5	1215 aa		21.18	■□□□□ 0.98
GGA1-223	ENST00000491295	ALAS1	P13196	640 aa		21.17	■□□□□ 0.98
GGA1-223	ENST00000491295	CDK7	P50613	346 aa		21.17	■□□□□ 0.98
GGA1-223	ENST00000491295	CNTN2	Q02246	1040 aa		21.17	■□□□□ 0.98
GGA1-223	ENST00000491295	GNAS	Q5JWF2	1037 aa		21.17	■□□□□ 0.98
GGA1-223	ENST00000491295	TTC14	Q96N46	770 aa		21.17	■□□□□ 0.98
GGA1-223	ENST00000491295	NMT2	O60551	498 aa		21.16	■□□□□ 0.98
GGA1-223	ENST00000491295	ASGR1	P07306	291 aa		21.16	■□□□□ 0.98
GGA1-223	ENST00000491295	TOP1	P11387	765 aa	Known RBP	21.16	■□□□□ 0.98
GGA1-223	ENST00000491295	ITGB8	P26012	769 aa		21.16	■□□□□ 0.98
GGA1-223	ENST00000491295	NT5C2	P49902	561 aa		21.16	■□□□□ 0.98
GGA1-223	ENST00000491295	MFAP1	P55081	439 aa	Known RBP	21.16	■□□□□ 0.98
GGA1-223	ENST00000491295	TNFAIP2	Q03169	654 aa		21.16	■□□□□ 0.98
GGA1-223	ENST00000491295	FPGS	Q05932	587 aa		21.16	■□□□□ 0.98
GGA1-223	ENST00000491295	BTNL9	Q6UXG8	535 aa		21.16	■□□□□ 0.98
GGA1-223	ENST00000491295	RWDD1	Q9H446	243 aa	Predicted RBP	21.16	■□□□□ 0.98
GGA1-223	ENST00000491295	LOC102724159	A0A0B4J2E5	919 aa		21.15	■□□□□ 0.98
GGA1-223	ENST00000491295	SOWAHB	A6NEL2	793 aa		21.15	■□□□□ 0.98
GGA1-223	ENST00000491295	TIMP1	P01033	207 aa		21.15	■□□□□ 0.98
GGA1-223	ENST00000491295	ICAM1	P05362	532 aa		21.15	■□□□□ 0.98
GGA1-223	ENST00000491295	HSPD1	P10809	573 aa	Known RBP	21.15	■□□□□ 0.98
GGA1-223	ENST00000491295	PWP2	Q15269	919 aa	Known RBP	21.15	■□□□□ 0.98
GGA1-223	ENST00000491295	IQSEC1	Q6DN90	963 aa		21.15	■□□□□ 0.98
GGA1-223	ENST00000491295	VTI1A	Q96AJ9	217 aa		21.15	■□□□□ 0.98
GGA1-223	ENST00000491295	FAM227B	Q96M60	508 aa		21.15	■□□□□ 0.98
GGA1-223	ENST00000491295	SEZ6L	Q9BYH1	1024 aa		21.15	■□□□□ 0.98
GGA1-223	ENST00000491295	TOMM22	Q9NS69	142 aa		21.15	■□□□□ 0.98
GGA1-223	ENST00000491295	CCPG1	Q9ULG6	757 aa		21.15	■□□□□ 0.98
GGA1-223	ENST00000491295		Q9Y3F1	56 aa		21.15	■□□□□ 0.98
GGA1-223	ENST00000491295		A0A0D9SFI3	127 aa		21.14	■□□□□ 0.97
GGA1-223	ENST00000491295		A0A0U1RQG5	324 aa	Predicted RBP	21.14	■□□□□ 0.97
GGA1-223	ENST00000491295	MYADML2	A6NDP7	307 aa		21.14	■□□□□ 0.97
GGA1-223	ENST00000491295	ARVCF	O00192	962 aa		21.14	■□□□□ 0.97
GGA1-223	ENST00000491295	DLL1	O00548	723 aa		21.14	■□□□□ 0.97

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