RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 NPLOC4Q8TAT6 608 aa22.03■■□□□ 1.12
AGRN-208ENST00000479707 MTA3Q9BTC8 594 aa22.03■■□□□ 1.12
AGRN-208ENST00000479707 MYL10Q9BUA6 226 aa22.03■■□□□ 1.12
AGRN-208ENST00000479707 RANBP17Q9H2T7 1088 aaKnown RBP22.03■■□□□ 1.12
AGRN-208ENST00000479707 GTF3C3Q9Y5Q9 886 aa22.03■■□□□ 1.12
AGRN-208ENST00000479707 CCDC69A6NI79 296 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 DHX16O60231 1041 aaKnown RBP22.02■■□□□ 1.12
AGRN-208ENST00000479707 COBLO75128 1261 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 INHAP05111 366 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 UBXN2AP68543 259 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 EXOSC10Q01780 885 aaKnown RBP22.02■■□□□ 1.12
AGRN-208ENST00000479707 TRIM32Q13049 653 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 KCTD2Q14681 263 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 MTFR1Q15390 333 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 ADGRF4Q8IZF3 695 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 TRIB2Q92519 343 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 APBA2Q99767 749 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 MAD2L2Q9UI95 211 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 CCPG1Q9ULG6 757 aa22.02■■□□□ 1.12
AGRN-208ENST00000479707 EPB41L2O43491 1005 aaKnown RBP22.01■■□□□ 1.11
AGRN-208ENST00000479707 PGK2P07205 417 aa22.01■■□□□ 1.11
AGRN-208ENST00000479707 XRCC5P13010 732 aaKnown RBP22.01■■□□□ 1.11
AGRN-208ENST00000479707 TROAPQ12815 778 aa22.01■■□□□ 1.11
AGRN-208ENST00000479707 GRM4Q14833 912 aa22.01■■□□□ 1.11
AGRN-208ENST00000479707 RAB11FIP4Q86YS3 637 aa22.01■■□□□ 1.11
AGRN-208ENST00000479707 ZNF654Q8IZM8 581 aa22.01■■□□□ 1.11
AGRN-208ENST00000479707 TMTC2Q8N394 836 aa22.01■■□□□ 1.11
AGRN-208ENST00000479707 TRERF1Q96PN7 1200 aa22.01■■□□□ 1.11
AGRN-208ENST00000479707 FLRT1Q9NZU1 646 aa22.01■■□□□ 1.11
AGRN-208ENST00000479707 PALM3A6NDB9 673 aaPredicted RBP22■■□□□ 1.11
AGRN-208ENST00000479707 KLRF2D3W0D1 207 aa22■■□□□ 1.11
AGRN-208ENST00000479707 ICAM1P05362 532 aa22■■□□□ 1.11
AGRN-208ENST00000479707 LIFRP42702 1097 aa22■■□□□ 1.11
AGRN-208ENST00000479707 ABRAQ8N0Z2 381 aa22■■□□□ 1.11
AGRN-208ENST00000479707 RNF146Q9NTX7 359 aa22■■□□□ 1.11
AGRN-208ENST00000479707 SEC24BO95487 1268 aa21.99■■□□□ 1.11
AGRN-208ENST00000479707 HMGCRP04035 888 aa21.99■■□□□ 1.11
AGRN-208ENST00000479707 HMGB1P09429 215 aaKnown RBP21.99■■□□□ 1.11
AGRN-208ENST00000479707 RXRAP19793 462 aa21.99■■□□□ 1.11
AGRN-208ENST00000479707 MUM1L1Q5H9M0 696 aa21.99■■□□□ 1.11
AGRN-208ENST00000479707 BLOC1S2Q6QNY1 142 aa21.99■■□□□ 1.11
AGRN-208ENST00000479707 ANKRD35Q8N283 1001 aa21.99■■□□□ 1.11
AGRN-208ENST00000479707 CHST13Q8NET6 341 aa21.99■■□□□ 1.11
AGRN-208ENST00000479707 DDX11Q96FC9 970 aa21.99■■□□□ 1.11
AGRN-208ENST00000479707 TMEM106CQ9BVX2 250 aa21.99■■□□□ 1.11
AGRN-208ENST00000479707 FBXO40Q9UH90 709 aa21.99■■□□□ 1.11
AGRN-208ENST00000479707 MYH6P13533 1939 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 HOXC6P09630 235 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 CCL5P13501 91 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 CASTP20810 708 aaKnown RBP21.98■■□□□ 1.11
AGRN-208ENST00000479707 FGD1P98174 961 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 CDC37Q16543 378 aaPredicted RBP21.98■■□□□ 1.11
AGRN-208ENST00000479707 TKFCQ3LXA3 575 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 CCDC144CPQ8IYA2 1237 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 TRMT44Q8IYL2 757 aaKnown RBP21.98■■□□□ 1.11
AGRN-208ENST00000479707 UNC93B1Q9H1C4 597 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 ACAD9Q9H845 621 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 JMJD4Q9H9V9 463 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 SLC5A4Q9NY91 659 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 SLC12A7Q9Y666 1083 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 WDR19Q8NEZ3 1342 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 PLXNA1Q9UIW2 1896 aa21.98■■□□□ 1.11
AGRN-208ENST00000479707 ZNF236Q9UL36 1845 aa21.97■■□□□ 1.11
AGRN-208ENST00000479707 BAZ2BQ9UIF8 2168 aaKnown RBP21.97■■□□□ 1.11
AGRN-208ENST00000479707 HTTP42858 3142 aa21.97■■□□□ 1.11
AGRN-208ENST00000479707 POTEFA5A3E0 1075 aa21.97■■□□□ 1.11
AGRN-208ENST00000479707 DDAH1O94760 285 aa21.97■■□□□ 1.11
AGRN-208ENST00000479707 PSMA5P28066 241 aa21.97■■□□□ 1.11
AGRN-208ENST00000479707 USH1GQ495M9 461 aa21.97■■□□□ 1.11
AGRN-208ENST00000479707 CTCFLQ8NI51 663 aaPredicted RBP21.97■■□□□ 1.11
AGRN-208ENST00000479707 RNF208Q9H0X6 261 aa21.97■■□□□ 1.11
AGRN-208ENST00000479707 RPS6KB1P23443 525 aa21.96■■□□□ 1.11
AGRN-208ENST00000479707 QRICH1Q2TAL8 776 aa21.96■■□□□ 1.11
AGRN-208ENST00000479707 SYNE3Q6ZMZ3 975 aa21.96■■□□□ 1.11
AGRN-208ENST00000479707 Q6ZUG5 572 aa21.96■■□□□ 1.11
AGRN-208ENST00000479707 NAP1L2Q9ULW6 460 aaPredicted RBP21.96■■□□□ 1.11
AGRN-208ENST00000479707 PRKAR2AP13861 404 aaKnown RBP21.95■■□□□ 1.1
AGRN-208ENST00000479707 CYP2C19P33261 490 aa21.95■■□□□ 1.1
AGRN-208ENST00000479707 CACNB2Q08289 660 aaPredicted RBP21.95■■□□□ 1.1
AGRN-208ENST00000479707 SLC35G1Q2M3R5 365 aa21.95■■□□□ 1.1
AGRN-208ENST00000479707 ZNF792Q3KQV3 632 aa21.95■■□□□ 1.1
AGRN-208ENST00000479707 MFSD14CQ5VZR4 134 aa21.95■■□□□ 1.1
AGRN-208ENST00000479707 NSMFQ6X4W1 530 aa21.95■■□□□ 1.1
AGRN-208ENST00000479707 SGMS1Q86VZ5 419 aa21.95■■□□□ 1.1
AGRN-208ENST00000479707 MICU3Q86XE3 530 aa21.95■■□□□ 1.1
AGRN-208ENST00000479707 HOMER1Q86YM7 354 aa21.95■■□□□ 1.1
AGRN-208ENST00000479707 PIBF1Q8WXW3 757 aa21.95■■□□□ 1.1
AGRN-208ENST00000479707 MAML3Q96JK9 1138 aa21.95■■□□□ 1.1
AGRN-208ENST00000479707 BRPF3Q9ULD4 1205 aa21.95■■□□□ 1.1
AGRN-208ENST00000479707 KIF5BP33176 963 aa21.94■■□□□ 1.1
AGRN-208ENST00000479707 PIGSQ96S52 555 aa21.94■■□□□ 1.1
AGRN-208ENST00000479707 MAP3K14Q99558 947 aa21.94■■□□□ 1.1
AGRN-208ENST00000479707 A1CFQ9NQ94 594 aaKnown RBP21.94■■□□□ 1.1
AGRN-208ENST00000479707 KLF18A0A0U1RQI7 1052 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 NFIBO00712 420 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 CYTH3O43739 400 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 CALM1P0DP23 149 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 CALM2P0DP24 149 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 CALM3P0DP25 149 aa21.93■■□□□ 1.1
AGRN-208ENST00000479707 EN2P19622 333 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms