RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 PCOLCE2Q9UKZ9 415 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 CEP131Q9UPN4 1083 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 EMC9Q9Y3B6 208 aa4.9□□□□□ -1.63
HMGB1P25-201ENST00000468402 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 MEIS1O00470 390 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 CAND2O75155 1236 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 LRIG2O94898 1065 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 NPTXRO95502 500 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 EYA4O95677 639 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 SCGB1D2O95969 90 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 RAB6AP20340 208 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 NTF4P34130 210 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 ETV3P41162 512 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 USP11P51784 963 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 NEK2P51955 445 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 MTMR1Q13613 665 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 DHCR24Q15392 516 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 DPY19L1Q2PZI1 675 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 TRIM61Q5EBN2 209 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 PRSS36Q5K4E3 855 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 PIK3R6Q5UE93 754 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 CDCA2Q69YH5 1023 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 LHFPL2Q6ZUX7 228 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 NECAB2Q7Z6G3 386 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 SPATS2Q86XZ4 545 aaKnown RBP4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 PASD1Q8IV76 773 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 FAM9AQ8IZU1 332 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 MYO1HQ8N1T3 1032 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 ARHGEF39Q8N4T4 335 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 RCC1LQ96I51 464 aaKnown RBP4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 MRGPRX3Q96LB0 322 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 CCDC140Q96MF4 163 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 YIPF4Q9BSR8 244 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 TMPRSS13Q9BYE2 586 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 PCGF6Q9BYE7 350 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 ASPSCR1Q9BZE9 553 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 TPSG1Q9NRR2 321 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 NOB1Q9ULX3 412 aaKnown RBP4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 DIS3Q9Y2L1 958 aaKnown RBP4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 GPR55Q9Y2T6 319 aaPredicted RBP4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 TRAF6Q9Y4K3 522 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 PCDHA9Q9Y5H5 950 aa4.89□□□□□ -1.63
HMGB1P25-201ENST00000468402 MEGF11A6BM72 1044 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 B4E1Z4 1266 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 FAM229AH3BQW9 127 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 GPR39O43194 453 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 SART1O43290 800 aaKnown RBP4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 VAMP4O75379 141 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 WISP1O95388 367 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 CRTAMO95727 393 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 CT47B1P0C2W7 299 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 CCND1P24385 295 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 HOXC12P31275 282 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 RHBDL3P58872 404 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZNF445P59923 1031 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 IL2P60568 153 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 AMPD2Q01433 879 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 GUCY1A3Q02108 690 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 MCL1Q07820 350 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 LETMD1Q6P1Q0 360 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 SLC4A10Q6U841 1118 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 C14orf80Q86SX3 495 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 DDX53Q86TM3 631 aaKnown RBP4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 MTDHQ86UE4 582 aaKnown RBP4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 FIBCD1Q8N539 461 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 DTWD1Q8N5C7 304 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 ZNF513Q8N8E2 541 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 TMEM145Q8NBT3 493 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 ASCC2Q9H1I8 757 aaPredicted RBP4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 IFT22Q9H7X7 185 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 SF3B6Q9Y3B4 125 aaKnown RBP4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 DAGLAQ9Y4D2 1042 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 PHLDB1Q86UU1 1377 aa4.88□□□□□ -1.63
HMGB1P25-201ENST00000468402 A0A087WZG4 1122 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 TCRBV16S1A1N1A0A5B0 115 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 AQP7O14520 342 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 NEMP1O14524 444 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 PAX4O43316 350 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 AKAP10O43572 662 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 DYRK3O43781 588 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 CPP00450 1065 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 C6orf222P0C671 652 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 ITIH2P19823 946 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 GNALP38405 381 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 CAP2P40123 477 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 MAP4K2Q12851 820 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 HDAC1Q13547 482 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 SEPT7Q16181 437 aaKnown RBP4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 RSPO4Q2I0M5 234 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 PRSS53Q2L4Q9 553 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 MAP9Q49MG5 647 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 IQSEC1Q6DN90 963 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 KSR2Q6VAB6 950 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 KIAA1211Q6ZU35 1233 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 MAMDC2Q7Z304 686 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 FBXO11Q86XK2 927 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 CNTD1Q8N815 330 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 SMG8Q8ND04 991 aaKnown RBP4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 GSTCDQ8NEC7 633 aa4.87□□□□□ -1.63
HMGB1P25-201ENST00000468402 COG1Q8WTW3 980 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms