RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 ARL4DP49703 201 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 ZNF280AP59817 542 aaPredicted RBP6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 CYP4F3Q08477 520 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 PICALMQ13492 652 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 PDE3AQ14432 1141 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 MINDY4Q4G0A6 757 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 GTF2IRD2BQ6EKJ0 949 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 STYK1Q6J9G0 422 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 PSAPL1Q6NUJ1 521 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 POMZP3Q6PJE2 187 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 GTF2IRD2Q86UP8 949 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 CCDC144CPQ8IYA2 1237 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 IL22RA1Q8N6P7 574 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 SLC16A10Q8TF71 515 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 CYB5D2Q8WUJ1 264 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 KCTD13Q8WZ19 329 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 GP6Q9HCN6 339 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 VTA1Q9NP79 307 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 ANLNQ9NQW6 1124 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 DDX21Q9NR30 783 aaKnown RBP eCLIP6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 CGGBP1Q9UFW8 167 aaPredicted RBP6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 ZBTB21Q9ULJ3 1066 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 AKT3Q9Y243 479 aa6.73□□□□□ -1.33
TM9SF3-202ENST00000443638 A0A087WZG4 1122 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 FAM181BA6NEQ2 426 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 APAF1O14727 1248 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 FSCN2O14926 492 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 AOC2O75106 756 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 GLRX3O76003 335 aaKnown RBP6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 FKBP9O95302 570 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 DLGAP3O95886 979 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 SERPINB3P29508 390 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 CDC25BP30305 580 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 RECQLP46063 649 aaPredicted RBP6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 SLBPQ14493 270 aaKnown RBP eCLIP6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 GRM3Q14832 879 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 NKG7Q16617 165 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 TXNDC11Q6PKC3 985 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 FKBP9P1Q75LS8 142 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 ADAT2Q7Z6V5 191 aaKnown RBP6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 MORC1Q86VD1 984 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 NPAS3Q8IXF0 933 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 CRACR2BQ8N4Y2 399 aaPredicted RBP6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 TMEM145Q8NBT3 493 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 PPP1R13LQ8WUF5 828 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 VWCEQ96DN2 955 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 WNK4Q96J92 1243 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 CCDC140Q96MF4 163 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 NKX2-4Q9H2Z4 354 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 SAMD15Q9P1V8 674 aa6.72□□□□□ -1.33
TM9SF3-202ENST00000443638 LOC100289279A0A1B0GTE1 492 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 KLRG2A4D1S0 409 aaPredicted RBP6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 LINC01387J3KSC0 135 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 ERC2O15083 957 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 TBX3O15119 743 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 SNUPNO95149 360 aaKnown RBP6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 NBPF7P0C2Y1 421 aaPredicted RBP6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 MYBL2P10244 700 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 PF4V1P10720 104 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 RBP3P10745 1247 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 CD53P19397 219 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 ITGA6P23229 1130 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 GBP1P32455 592 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 LSSP48449 732 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 FOXD4Q12950 439 aaPredicted RBP6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 KLF1Q13351 362 aaPredicted RBP6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 GTF2H3Q13889 308 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 PCBP2Q15366 365 aaKnown RBP eCLIP6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 NBPF12Q5TAG4 269 aaPredicted RBP6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 IQSEC1Q6DN90 963 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 DENND5AQ6IQ26 1287 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 TOGARAM2Q6ZUX3 1019 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 TEX2Q8IWB9 1127 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 C7orf61Q8IZ16 206 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 NXPE1Q8N323 547 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 ZNF507Q8TCN5 953 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 BRF1Q92994 677 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 RUNDC1Q96C34 613 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 AIFM3Q96NN9 605 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 DPH2Q9BQC3 489 aaPredicted RBP6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 EMC7Q9NPA0 242 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 GIT1Q9Y2X7 761 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 DAAM1Q9Y4D1 1078 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 TRAF6Q9Y4K3 522 aa6.71□□□□□ -1.34
TM9SF3-202ENST00000443638 TMPRSS2O15393 492 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 TCEA3O75764 348 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 CST3P01034 146 aaPredicted RBP6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 ASGR2P07307 311 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 SLFN14P0C7P3 912 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 HOXC12P31275 282 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 CYP2C19P33261 490 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 ID3Q02535 119 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 FAPQ12884 760 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 AUHQ13825 339 aaKnown RBP6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 HP1BP3Q5SSJ5 553 aaPredicted RBP6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 UBE3DQ7Z6J8 389 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 DDX53Q86TM3 631 aaKnown RBP6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 CMTR2Q8IYT2 770 aaKnown RBP6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 ADCY4Q8NFM4 1077 aa6.7□□□□□ -1.34
TM9SF3-202ENST00000443638 MYRIPQ8NFW9 859 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms