RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SERTAD1Q9UHV2 236 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 MAP2K1Q02750 393 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-208ENST00000430669 TOB2Q14106 344 aaPredicted RBP12.81□□□□□ -0.36
PTCH1-208ENST00000430669 CCDC93Q567U6 631 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 PIH1D3Q9NQM4 214 aaKnown RBP12.81□□□□□ -0.36
PTCH1-208ENST00000430669 DNA2P51530 1060 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 LRRC47Q8N1G4 583 aaKnown RBP12.81□□□□□ -0.36
PTCH1-208ENST00000430669 LINC00301Q8NCQ3 95 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 DCAF4Q8WV16 495 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 PANK4Q9NVE7 773 aa12.81□□□□□ -0.36
PTCH1-208ENST00000430669 CFBP00751 764 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 EEF1GP26641 437 aaKnown RBP12.8□□□□□ -0.36
PTCH1-208ENST00000430669 ARID5AQ03989 594 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 SMC1AQ14683 1233 aaKnown RBP12.8□□□□□ -0.36
PTCH1-208ENST00000430669 TBC1D9BQ66K14 1250 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 EXOC8Q8IYI6 725 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 BPIFA3Q9BQP9 254 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 SPATA31A5Q5VU36 1347 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 SPATA31A7Q8IWB4 1347 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 METTL14Q9HCE5 456 aaKnown RBP12.8□□□□□ -0.36
PTCH1-208ENST00000430669 TECP42680 631 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 RETREG2Q8NC44 543 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 AZI2Q9H6S1 392 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 IKBKGQ9Y6K9 419 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 MACROD2A1Z1Q3 448 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 NBPF26B4DH59 902 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 SLFN13Q68D06 897 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 NBPF10Q6P3W6 841 aaKnown RBP12.8□□□□□ -0.36
PTCH1-208ENST00000430669 KIAA0825Q8IV33 1275 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 LRRC8AQ8IWT6 810 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 NBPF15Q8N660 670 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 CSRNP1Q96S65 589 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 PCDHA1Q9Y5I3 950 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 NFAT5O94916 1531 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 ADAMTSL3P82987 1691 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 PHRF1Q9P1Y6 1649 aaKnown RBP12.8□□□□□ -0.36
PTCH1-208ENST00000430669 PNMA6FA0A0J9YX94 578 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 SEL1L2Q5TEA6 688 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 SREK1Q8WXA9 508 aaKnown RBP12.8□□□□□ -0.36
PTCH1-208ENST00000430669 ZBTB21Q9ULJ3 1066 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 COL4A3BPQ9Y5P4 624 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 CHMP2AO43633 222 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 IVLP07476 585 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 SFMBT2Q5VUG0 894 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 FAM81BQ96LP2 452 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 TEKT3Q9BXF9 490 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 V9GYY5 206 aaPredicted RBP12.8□□□□□ -0.36
PTCH1-208ENST00000430669 PPP2R5EQ16537 467 aa12.8□□□□□ -0.36
PTCH1-208ENST00000430669 XPO4Q9C0E2 1151 aaKnown RBP12.8□□□□□ -0.36
PTCH1-208ENST00000430669 RGL2O15211 777 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 GAP43P17677 238 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 PSMD2Q13200 908 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 DMP1Q13316 513 aaPredicted RBP12.79□□□□□ -0.36
PTCH1-208ENST00000430669 LIN9Q5TKA1 542 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 MYRIPQ8NFW9 859 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 AFF2P51816 1311 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 CHMP4BP1P59074 171 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 RESP18Q5W5W9 173 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 GPBP1Q86WP2 473 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 ZNF34Q8IZ26 560 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 YWHAEP62258 255 aaKnown RBP12.79□□□□□ -0.36
PTCH1-208ENST00000430669 SYT10Q6XYQ8 523 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 BZW2Q9Y6E2 419 aaKnown RBP12.79□□□□□ -0.36
PTCH1-208ENST00000430669 CSF1RP07333 972 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 DOK7Q18PE1 504 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 RAPGEF1Q13905 1077 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 ATG9AQ7Z3C6 839 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 LY9Q9HBG7 655 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 KAT6AQ92794 2004 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 SCNN1DP51172 638 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 MSL1Q68DK7 614 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 MAATS1Q7Z4T9 603 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 CDHR1Q96JP9 859 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 IVNS1ABPQ9Y6Y0 642 aa12.79□□□□□ -0.36
PTCH1-208ENST00000430669 RGPD1P0DJD0 1748 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 CCDC169A6NNP5 214 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 IRX3P78415 501 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-208ENST00000430669 SGMS1Q86VZ5 419 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 FOXP4Q8IVH2 680 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-208ENST00000430669 CCDC77Q9BR77 488 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 MTRF1LQ9UGC7 380 aaKnown RBP12.78□□□□□ -0.36
PTCH1-208ENST00000430669 MED1Q15648 1581 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-208ENST00000430669 DPY19L2Q6NUT2 758 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 VTI1AQ96AJ9 217 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 hCG_1642624A0A1W2PR95 340 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 ZNF658Q5TYW1 1059 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-208ENST00000430669 GPKOWQ92917 476 aaPredicted RBP eCLIP12.78□□□□□ -0.36
PTCH1-208ENST00000430669 SECISBP2LQ93073 1101 aaKnown RBP12.78□□□□□ -0.36
PTCH1-208ENST00000430669 MYCLP12524 364 aaPredicted RBP12.78□□□□□ -0.36
PTCH1-208ENST00000430669 CDK8P49336 464 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 DYNLL1P63167 89 aaKnown RBP12.78□□□□□ -0.36
PTCH1-208ENST00000430669 TMEM179Q6ZVK1 233 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 CMTR1Q8N1G2 835 aaKnown RBP12.78□□□□□ -0.36
PTCH1-208ENST00000430669 RWDD2AQ9UIY3 292 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 PRR16Q569H4 304 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 TRIM58Q8NG06 486 aa12.78□□□□□ -0.36
PTCH1-208ENST00000430669 P4HA1P13674 534 aa12.77□□□□□ -0.36
PTCH1-208ENST00000430669 KRT9P35527 623 aa12.77□□□□□ -0.36
PTCH1-208ENST00000430669 FAM160B2Q86V87 743 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms