RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 IDEP14735 1019 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 TRAPPC3LQ5T215 181 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 TMC4Q7Z404 712 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 TMTC2Q8N394 836 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 SPATA20Q8TB22 786 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 CD209Q9NNX6 404 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 KCNJ18B7U540 433 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 CASQ1P31415 396 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 DDR1Q08345 913 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 KCNJ12Q14500 433 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 MCM6Q14566 821 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 CERS5Q8N5B7 392 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 NEK11Q8NG66 645 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 PNKPQ96T60 521 aa13.25□□□□□ -0.29
ITSN1-211ENST00000399355 SMCO2A6NFE2 343 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 NEMFO60524 1076 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 SH3RF1Q7Z6J0 888 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 PPFIBP1Q86W92 1011 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 PROCA1Q8NCQ7 364 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-211ENST00000399355 TBCKQ8TEA7 893 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 RTFDC1Q9BY42 306 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-211ENST00000399355 RABEP2Q9H5N1 569 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 L2HGDHQ9H9P8 463 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 ADGRG1Q9Y653 693 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 CXCR5P32302 372 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 PLA2G4AP47712 749 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 PPP2R3AQ06190 1150 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 ECM1Q16610 540 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 NT5DC1Q5TFE4 455 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 SPATA1Q5VX52 437 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 DPP8Q6V1X1 898 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-211ENST00000399355 RPGRQ92834 1020 aaKnown RBP13.24□□□□□ -0.29
ITSN1-211ENST00000399355 PCMTD1Q96MG8 357 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-211ENST00000399355 COL14A1Q05707 1796 aaKnown RBP13.24□□□□□ -0.29
ITSN1-211ENST00000399355 STXBP3O00186 592 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 TADA3O75528 432 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 UBA7P41226 1012 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 TNNI2P48788 182 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 CLEC4GQ6UXB4 293 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 KIAA0825Q8IV33 1275 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 RGS22Q8NE09 1264 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 ZNF397Q8NF99 534 aaPredicted RBP13.24□□□□□ -0.29
ITSN1-211ENST00000399355 CRACR2AQ9BSW2 395 aa13.24□□□□□ -0.29
ITSN1-211ENST00000399355 REXO2Q9Y3B8 237 aaKnown RBP13.24□□□□□ -0.29
ITSN1-211ENST00000399355 USP17L15C9J2P7 530 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 USP17L13C9JLJ4 530 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 USP17L11C9JVI0 530 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 USP17L18D6R9N7 530 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 USP17L22D6RA61 530 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 USP17L17D6RBQ6 530 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 USP17L19D6RCP7 530 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 USP17L20D6RJB6 530 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 ARHGAP6O43182 974 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 PNMA6AP0CW24 399 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-211ENST00000399355 USP17L24Q0WX57 530 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 TBC1D10BQ4KMP7 808 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-211ENST00000399355 USP17L6PQ6QN14 398 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 CCDC84Q86UT8 332 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-211ENST00000399355 SPICE1Q8N0Z3 855 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 TRIM47Q96LD4 638 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 LACRTQ9GZZ8 138 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 FAM207AQ9NSI2 230 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-211ENST00000399355 FLT1P17948 1338 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 MACROD2A1Z1Q3 448 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 EDIL3O43854 480 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 PARD6BQ9BYG5 372 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 LAMB2P55268 1798 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 PSDA5PKW4 1024 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-211ENST00000399355 ANKRD65E5RJM6 399 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 MFAP3LO75121 409 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 STAT3P40763 770 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 ARID5AQ03989 594 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 IQUBQ8NA54 791 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 BRMS1Q9HCU9 246 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 CGNQ9P2M7 1197 aaKnown RBP13.23□□□□□ -0.29
ITSN1-211ENST00000399355 PPP1R11O60927 126 aaPredicted RBP13.23□□□□□ -0.29
ITSN1-211ENST00000399355 DMTNQ08495 405 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 PAK1Q13153 545 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 CDKAL1Q5VV42 579 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 DTHD1Q6ZMT9 781 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 ZHX3Q9H4I2 956 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 DISC1Q9NRI5 854 aa13.23□□□□□ -0.29
ITSN1-211ENST00000399355 CBFA2T2O43439 604 aa13.22□□□□□ -0.29
ITSN1-211ENST00000399355 COPB1P53618 953 aaKnown RBP13.22□□□□□ -0.29
ITSN1-211ENST00000399355 RNASE9P60153 205 aaKnown RBP13.22□□□□□ -0.29
ITSN1-211ENST00000399355 ASIC1P78348 528 aa13.22□□□□□ -0.29
ITSN1-211ENST00000399355 KIF4BQ2VIQ3 1234 aa13.22□□□□□ -0.29
ITSN1-211ENST00000399355 ANKRD40Q6AI12 368 aa13.22□□□□□ -0.29
ITSN1-211ENST00000399355 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.22□□□□□ -0.29
ITSN1-211ENST00000399355 CEP131Q9UPN4 1083 aa13.22□□□□□ -0.29
ITSN1-211ENST00000399355 SERPINB2P05120 415 aa13.22□□□□□ -0.29
ITSN1-211ENST00000399355 PARP1P09874 1014 aaKnown RBP13.22□□□□□ -0.29
ITSN1-211ENST00000399355 GYS1P13807 737 aa13.22□□□□□ -0.29
ITSN1-211ENST00000399355 TCP11X2Q5H9J9 407 aa13.22□□□□□ -0.29
ITSN1-211ENST00000399355 RIN2Q8WYP3 895 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-211ENST00000399355 PDGFDQ9GZP0 370 aaPredicted RBP13.22□□□□□ -0.29
ITSN1-211ENST00000399355 PCDHA4Q9UN74 947 aa13.22□□□□□ -0.29
ITSN1-211ENST00000399355 IRS2Q9Y4H2 1338 aa13.21□□□□□ -0.29
ITSN1-211ENST00000399355 MATR3P43243 847 aaKnown RBP eCLIP13.21□□□□□ -0.29
ITSN1-211ENST00000399355 UBXN2AP68543 259 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 100.2 ms