RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 COPB2P35606 906 aa6.23□□□□□ -1.41
GABPB1-204ENST00000396464 POU5F1Q01860 360 aaKnown RBP6.23□□□□□ -1.41
GABPB1-204ENST00000396464 PIN1Q13526 163 aaPredicted RBP6.23□□□□□ -1.41
GABPB1-204ENST00000396464 MORC3Q14149 939 aa6.23□□□□□ -1.41
GABPB1-204ENST00000396464 CCDC174Q6PII3 467 aa6.23□□□□□ -1.41
GABPB1-204ENST00000396464 SPATC1Q76KD6 591 aa6.23□□□□□ -1.41
GABPB1-204ENST00000396464 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.23□□□□□ -1.41
GABPB1-204ENST00000396464 GPBAR1Q8TDU6 330 aa6.23□□□□□ -1.41
GABPB1-204ENST00000396464 RHOVQ96L33 236 aa6.23□□□□□ -1.41
GABPB1-204ENST00000396464 NEUROD6Q96NK8 337 aa6.23□□□□□ -1.41
GABPB1-204ENST00000396464 SMAD5Q99717 465 aaKnown RBP6.23□□□□□ -1.41
GABPB1-204ENST00000396464 KCNQ5Q9NR82 932 aa6.23□□□□□ -1.41
GABPB1-204ENST00000396464 TPX2Q9ULW0 747 aaKnown RBP6.23□□□□□ -1.41
GABPB1-204ENST00000396464 ANP32CO43423 234 aa6.22□□□□□ -1.41
GABPB1-204ENST00000396464 TIMM44O43615 452 aa6.22□□□□□ -1.41
GABPB1-204ENST00000396464 IFIT2P09913 472 aaKnown RBP6.22□□□□□ -1.41
GABPB1-204ENST00000396464 MLC1Q15049 377 aa6.22□□□□□ -1.41
GABPB1-204ENST00000396464 L1TD1Q5T7N2 865 aaKnown RBP6.22□□□□□ -1.41
GABPB1-204ENST00000396464 RINLQ6ZS11 566 aa6.22□□□□□ -1.41
GABPB1-204ENST00000396464 TCEAL8Q8IYN2 117 aa6.22□□□□□ -1.41
GABPB1-204ENST00000396464 ATL2Q8NHH9 583 aa6.22□□□□□ -1.41
GABPB1-204ENST00000396464 RTFDC1Q9BY42 306 aaPredicted RBP6.22□□□□□ -1.41
GABPB1-204ENST00000396464 CEP44Q9C0F1 390 aa6.22□□□□□ -1.41
GABPB1-204ENST00000396464 FAM53CQ9NYF3 392 aa6.22□□□□□ -1.41
GABPB1-204ENST00000396464 NOB1Q9ULX3 412 aaKnown RBP6.22□□□□□ -1.41
GABPB1-204ENST00000396464 PLAGL2Q9UPG8 496 aa6.22□□□□□ -1.41
GABPB1-204ENST00000396464 SUPT16HQ9Y5B9 1047 aaKnown RBP6.22□□□□□ -1.41
GABPB1-204ENST00000396464 CSADQ9Y600 493 aa6.22□□□□□ -1.41
GABPB1-204ENST00000396464 U3KQE9 123 aa6.22□□□□□ -1.41
GABPB1-204ENST00000396464 LRRC10BA6NIK2 292 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 PRPF3O43395 683 aaKnown RBP6.21□□□□□ -1.42
GABPB1-204ENST00000396464 F2P00734 622 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 GARTP22102 1010 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 CRKP46108 304 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 ZP2Q05996 745 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 FAM160A1Q05DH4 1040 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 SSRP1Q08945 709 aaKnown RBP6.21□□□□□ -1.42
GABPB1-204ENST00000396464 APOBRQ0VD83 1088 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 SIM2Q14190 667 aaPredicted RBP6.21□□□□□ -1.42
GABPB1-204ENST00000396464 CCDC85BQ15834 202 aaPredicted RBP6.21□□□□□ -1.42
GABPB1-204ENST00000396464 KCNMB1Q16558 191 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 FAM83BQ5T0W9 1011 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 ICE2Q659A1 982 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 LARP1BQ659C4 914 aaKnown RBP6.21□□□□□ -1.42
GABPB1-204ENST00000396464 NXNQ6DKJ4 435 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 DGKHQ86XP1 1220 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 AFAP1L2Q8N4X5 818 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 TEX19Q8NA77 164 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 STK35Q8TDR2 534 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 FBXO41Q8TF61 875 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 DAAM1Q9Y4D1 1078 aa6.21□□□□□ -1.42
GABPB1-204ENST00000396464 GREM1O60565 184 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 GJB6O95452 261 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 MYL3P08590 195 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 GSTT1P30711 240 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 EIF6P56537 245 aaKnown RBP6.2□□□□□ -1.42
GABPB1-204ENST00000396464 KCTD2Q14681 263 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 PPM1JQ5JR12 505 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 FAM102BQ5T8I3 360 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 WWC2Q6AWC2 1192 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 TPTE2Q6XPS3 522 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 ZSWIM9Q86XI8 627 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 KCT2Q8NC54 265 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 ENOX1Q8TC92 643 aaKnown RBP6.2□□□□□ -1.42
GABPB1-204ENST00000396464 PRDM7Q9NQW5 492 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 ZMYM5Q9UJ78 669 aa6.2□□□□□ -1.42
GABPB1-204ENST00000396464 DCDC2CA8MYV0 355 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 IGF2BP3O00425 579 aaKnown RBP eCLIP6.19□□□□□ -1.42
GABPB1-204ENST00000396464 SLC26A4O43511 780 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 GIPRP48546 466 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 MTMR1Q13613 665 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 LRRC14Q15048 493 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 FXNQ16595 210 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 TMEM67Q5HYA8 995 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 HDGFL2Q7Z4V5 671 aaPredicted RBP6.19□□□□□ -1.42
GABPB1-204ENST00000396464 SDR16C5Q8N3Y7 309 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 MAGEB6Q8N7X4 407 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 ZSWIM2Q8NEG5 633 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 FLAD1Q8NFF5 587 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 CXorf38Q8TB03 319 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 NKD1Q969G9 470 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 ELMO3Q96BJ8 720 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 HOOK2Q96ED9 719 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 FAM84AQ96KN4 292 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 HEXIM2Q96MH2 286 aaKnown RBP6.19□□□□□ -1.42
GABPB1-204ENST00000396464 TNKS2Q9H2K2 1166 aa6.19□□□□□ -1.42
GABPB1-204ENST00000396464 GOLGA6CA6NDK9 693 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 GOLGA6BA6NDN3 693 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 GSG1L2A8MUP6 293 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 FAM155AB1AL88 458 aaPredicted RBP6.18□□□□□ -1.42
GABPB1-204ENST00000396464 TCEA3O75764 348 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 GOLGA6DP0CG33 693 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 NEK3P51956 506 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 PURAQ00577 322 aaKnown RBP6.18□□□□□ -1.42
GABPB1-204ENST00000396464 PABPC4Q13310 644 aaKnown RBP eCLIP6.18□□□□□ -1.42
GABPB1-204ENST00000396464 MAP3K11Q16584 847 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 GFOD2Q3B7J2 385 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 CCDC184Q52MB2 194 aa6.18□□□□□ -1.42
GABPB1-204ENST00000396464 ANO1Q5XXA6 986 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms