RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 NEK8Q86SG6 692 aa18.97■□□□□ 0.63
NUP50-202ENST00000396096 BAG1Q99933 345 aaPredicted RBP18.97■□□□□ 0.63
NUP50-202ENST00000396096 USP40Q9NVE5 1235 aa18.97■□□□□ 0.63
NUP50-202ENST00000396096 KBTBD4Q9NVX7 518 aa18.97■□□□□ 0.63
NUP50-202ENST00000396096 LIMA1Q9UHB6 759 aaKnown RBP18.97■□□□□ 0.63
NUP50-202ENST00000396096 SERPINB13Q9UIV8 391 aa18.97■□□□□ 0.63
NUP50-202ENST00000396096 LRRC10BA6NIK2 292 aa18.96■□□□□ 0.63
NUP50-202ENST00000396096 CDC25AP30304 524 aa18.96■□□□□ 0.63
NUP50-202ENST00000396096 UBA7P41226 1012 aa18.96■□□□□ 0.63
NUP50-202ENST00000396096 PAK1Q13153 545 aa18.96■□□□□ 0.63
NUP50-202ENST00000396096 PTPN21Q16825 1174 aa18.96■□□□□ 0.63
NUP50-202ENST00000396096 HOMER1Q86YM7 354 aa18.96■□□□□ 0.63
NUP50-202ENST00000396096 REXO1L1PQ8IX06 675 aa18.96■□□□□ 0.63
NUP50-202ENST00000396096 ZNF646O15015 1829 aaPredicted RBP18.96■□□□□ 0.62
NUP50-202ENST00000396096 ZSCAN12O43309 604 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 TTLL1O95922 423 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 SPAG1Q07617 926 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 GOLGA8FQ08AF8 430 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 NCBP1Q09161 790 aaKnown RBP18.95■□□□□ 0.62
NUP50-202ENST00000396096 GOLGA8DPQ0D2H9 430 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 FILIP1LQ4L180 1135 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 CDC42EP5Q6NZY7 148 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 REXO1Q8N1G1 1221 aaKnown RBP18.95■□□□□ 0.62
NUP50-202ENST00000396096 TEKT1Q969V4 418 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 PANX2Q96RD6 677 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 MRIQ9BWK5 157 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 EHD4Q9H223 541 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 L2HGDHQ9H9P8 463 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 ITIH6Q6UXX5 1313 aa18.95■□□□□ 0.62
NUP50-202ENST00000396096 F8W031 263 aaPredicted RBP18.94■□□□□ 0.62
NUP50-202ENST00000396096 SHMT1P34896 483 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 FKBP1AP62942 108 aaKnown RBP18.94■□□□□ 0.62
NUP50-202ENST00000396096 DOK7Q18PE1 504 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 APOBEC3HQ6NTF7 200 aaKnown RBP18.94■□□□□ 0.62
NUP50-202ENST00000396096 PPP1R18Q6NYC8 613 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 UBA5Q9GZZ9 404 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 TMX4Q9H1E5 349 aaPredicted RBP18.94■□□□□ 0.62
NUP50-202ENST00000396096 PARP3Q9Y6F1 533 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 PHLPP2Q6ZVD8 1323 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 MYH4Q9Y623 1939 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 PP2D1A8MPX8 630 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 TEX33O43247 280 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 KLRC4O43908 158 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 MMP10P09238 476 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 ETF1P62495 437 aaKnown RBP18.94■□□□□ 0.62
NUP50-202ENST00000396096 PPP4R3BQ5MIZ7 849 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 PODNQ7Z5L7 613 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 NELFBQ8WX92 580 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 VAT1LQ9HCJ6 419 aa18.94■□□□□ 0.62
NUP50-202ENST00000396096 SIPA1L1O43166 1804 aa18.93■□□□□ 0.62
NUP50-202ENST00000396096 GOLGA6L9A6NEM1 432 aa18.93■□□□□ 0.62
NUP50-202ENST00000396096 AKR1B15C9JRZ8 316 aaPredicted RBP18.93■□□□□ 0.62
NUP50-202ENST00000396096 CCNT1O60563 726 aaKnown RBP18.93■□□□□ 0.62
NUP50-202ENST00000396096 HLA-DOAP06340 250 aa18.93■□□□□ 0.62
NUP50-202ENST00000396096 ZNF543Q08ER8 600 aa18.93■□□□□ 0.62
NUP50-202ENST00000396096 LETM2Q2VYF4 491 aa18.93■□□□□ 0.62
NUP50-202ENST00000396096 ADSSL1Q8N142 457 aa18.93■□□□□ 0.62
NUP50-202ENST00000396096 MXD3Q9BW11 206 aa18.93■□□□□ 0.62
NUP50-202ENST00000396096 RHOBTB3O94955 611 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 ADKP55263 362 aaKnown RBP18.92■□□□□ 0.62
NUP50-202ENST00000396096 TRIM65Q6PJ69 517 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 SYT10Q6XYQ8 523 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 CABP7Q86V35 215 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 LRRC47Q8N1G4 583 aaKnown RBP18.92■□□□□ 0.62
NUP50-202ENST00000396096 TBCKQ8TEA7 893 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 ZDHHC15Q96MV8 337 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 PPP2R2CQ9Y2T4 447 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 FRMPD2Q68DX3 1309 aaPredicted RBP18.92■□□□□ 0.62
NUP50-202ENST00000396096 RGPD3A6NKT7 1758 aaPredicted RBP18.92■□□□□ 0.62
NUP50-202ENST00000396096 RGPD4Q7Z3J3 1758 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 PRCPP42785 496 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 SCNN1DP51172 638 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 ADCY7P51828 1080 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 KRT31Q15323 416 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 CCDC93Q567U6 631 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 IGSF22Q8N9C0 903 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 ERO1AQ96HE7 468 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 CCDC17Q96LX7 622 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 NAA15Q9BXJ9 866 aaKnown RBP18.92■□□□□ 0.62
NUP50-202ENST00000396096 GTPBP4Q9BZE4 634 aaKnown RBP18.92■□□□□ 0.62
NUP50-202ENST00000396096 GDAQ9Y2T3 454 aa18.92■□□□□ 0.62
NUP50-202ENST00000396096 PNMA6FA0A0J9YX94 578 aa18.91■□□□□ 0.62
NUP50-202ENST00000396096 H7C1D1 291 aa18.91■□□□□ 0.62
NUP50-202ENST00000396096 CRKP46108 304 aa18.91■□□□□ 0.62
NUP50-202ENST00000396096 HDLBPQ00341 1268 aaKnown RBP18.91■□□□□ 0.62
NUP50-202ENST00000396096 KMT5BQ4FZB7 885 aa18.91■□□□□ 0.62
NUP50-202ENST00000396096 GPATCH4Q5T3I0 446 aaKnown RBP18.91■□□□□ 0.62
NUP50-202ENST00000396096 PPFIBP1Q86W92 1011 aa18.91■□□□□ 0.62
NUP50-202ENST00000396096 GIMAP8Q8ND71 665 aaPredicted RBP18.91■□□□□ 0.62
NUP50-202ENST00000396096 RASSF8Q8NHQ8 419 aa18.91■□□□□ 0.62
NUP50-202ENST00000396096 LRRC15Q8TF66 581 aa18.91■□□□□ 0.62
NUP50-202ENST00000396096 BIN2Q9UBW5 565 aaPredicted RBP18.91■□□□□ 0.62
NUP50-202ENST00000396096 G3V3G9 751 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 SLU7O95391 586 aaKnown RBP18.9■□□□□ 0.62
NUP50-202ENST00000396096 APBA3O96018 575 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 PLCG1P19174 1290 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 FECHP22830 423 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 TCP11X2Q5H9J9 407 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 DCAF8Q5TAQ9 597 aa18.9■□□□□ 0.62
NUP50-202ENST00000396096 JAKMIP3Q5VZ66 844 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms