RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 MSANTD4Q8NCY6 345 aa22.87■■□□□ 1.25
CLN5-201ENST00000377453 COL16A1Q07092 1604 aaPredicted RBP22.87■■□□□ 1.25
CLN5-201ENST00000377453 SPAG1Q07617 926 aa22.87■■□□□ 1.25
CLN5-201ENST00000377453 CCDC178Q5BJE1 867 aa22.87■■□□□ 1.25
CLN5-201ENST00000377453 ATP8A2Q9NTI2 1148 aa22.87■■□□□ 1.25
CLN5-201ENST00000377453 ARPP21Q9UBL0 812 aaPredicted RBP22.87■■□□□ 1.25
CLN5-201ENST00000377453 RASSF10A6NK89 507 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 KIF5BP33176 963 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 CYP27A1Q02318 531 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 AMIGO3Q86WK7 504 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 MKNK2Q9HBH9 465 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 RMND1Q9NWS8 449 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 RAB21Q9UL25 225 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 LGALS16A8MUM7 142 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 PLCG1P19174 1290 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 GSPT2Q8IYD1 628 aaKnown RBP22.86■■□□□ 1.25
CLN5-201ENST00000377453 DUSP9Q99956 384 aaKnown RBP22.86■■□□□ 1.25
CLN5-201ENST00000377453 LACRTQ9GZZ8 138 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 VAT1LQ9HCJ6 419 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 L1RE1Q9UN81 338 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 FAN1Q9Y2M0 1017 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 LUC7L2Q9Y383 392 aaKnown RBP22.86■■□□□ 1.25
CLN5-201ENST00000377453 SCN7AQ01118 1682 aa22.86■■□□□ 1.25
CLN5-201ENST00000377453 M0R2N6 131 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 MAPKAPK5Q8IW41 473 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 OR8K1Q8NGG5 319 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 ZNF507Q8TCN5 953 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 TGFBRAP1Q8WUH2 860 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 MMS19Q96T76 1030 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 LRRIQ3A6PVS8 624 aaPredicted RBP22.85■■□□□ 1.25
CLN5-201ENST00000377453 H7C1D1 291 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 ZNF185O15231 689 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 CALML3P27482 149 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 LETM2Q2VYF4 491 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 CCDC122Q5T0U0 273 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 ARL6IP4Q66PJ3 421 aaKnown RBP22.85■■□□□ 1.25
CLN5-201ENST00000377453 CALCOCO1Q9P1Z2 691 aa22.85■■□□□ 1.25
CLN5-201ENST00000377453 PCP11498 1178 aaKnown RBP22.84■■□□□ 1.25
CLN5-201ENST00000377453 STK4Q13043 487 aa22.84■■□□□ 1.25
CLN5-201ENST00000377453 TXNRD1Q16881 649 aa22.84■■□□□ 1.25
CLN5-201ENST00000377453 C12orf60Q5U649 245 aa22.84■■□□□ 1.25
CLN5-201ENST00000377453 TAF3Q5VWG9 929 aa22.84■■□□□ 1.25
CLN5-201ENST00000377453 TTI2Q6NXR4 508 aa22.84■■□□□ 1.25
CLN5-201ENST00000377453 STXBP3O00186 592 aa22.84■■□□□ 1.25
CLN5-201ENST00000377453 IRX5P78411 483 aaPredicted RBP22.84■■□□□ 1.25
CLN5-201ENST00000377453 NBPF5PQ86XG9 351 aaPredicted RBP22.84■■□□□ 1.25
CLN5-201ENST00000377453 SMCR8Q8TEV9 937 aaPredicted RBP22.84■■□□□ 1.25
CLN5-201ENST00000377453 PCMTD1Q96MG8 357 aaPredicted RBP22.84■■□□□ 1.25
CLN5-201ENST00000377453 A0A0U1RQG5 324 aaPredicted RBP22.83■■□□□ 1.25
CLN5-201ENST00000377453 PLEKP08567 350 aaPredicted RBP22.83■■□□□ 1.25
CLN5-201ENST00000377453 TSPY3P0CV98 308 aa22.83■■□□□ 1.25
CLN5-201ENST00000377453 TSPY8P0CW00 308 aa22.83■■□□□ 1.25
CLN5-201ENST00000377453 MRPS25P82663 173 aaKnown RBP22.83■■□□□ 1.25
CLN5-201ENST00000377453 ANKRD40Q6AI12 368 aa22.83■■□□□ 1.25
CLN5-201ENST00000377453 HDXQ7Z353 690 aa22.83■■□□□ 1.25
CLN5-201ENST00000377453 CSGALNACT2Q8N6G5 542 aa22.83■■□□□ 1.25
CLN5-201ENST00000377453 COL14A1Q05707 1796 aaKnown RBP22.83■■□□□ 1.25
CLN5-201ENST00000377453 CASP8Q14790 479 aa22.83■■□□□ 1.25
CLN5-201ENST00000377453 CCDC102AQ96A19 550 aa22.83■■□□□ 1.25
CLN5-201ENST00000377453 DLEC1Q9Y238 1755 aa22.83■■□□□ 1.24
CLN5-201ENST00000377453 LTBP4Q8N2S1 1624 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 GRM4Q14833 912 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 WHAMMP3Q1A5X7 153 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 SBK1Q52WX2 424 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 KRT26Q7Z3Y9 468 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 TMEM47Q9BQJ4 181 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 TUBGCP2Q9BSJ2 902 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 MACROD2A1Z1Q3 448 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 CCNT1O60563 726 aaKnown RBP22.82■■□□□ 1.24
CLN5-201ENST00000377453 CAPN2P17655 700 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 PDE4DQ08499 809 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 USP17L2Q6R6M4 530 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 NLRP3Q96P20 1036 aa22.82■■□□□ 1.24
CLN5-201ENST00000377453 TRIM21P19474 475 aaKnown RBP22.81■■□□□ 1.24
CLN5-201ENST00000377453 TECP42680 631 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 ASIC1P78348 528 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 TRIM14Q14142 442 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 CLEC4GQ6UXB4 293 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 KIAA1328Q86T90 577 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 DNAJC7Q99615 494 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 MAGEC2Q9UBF1 373 aaPredicted RBP22.81■■□□□ 1.24
CLN5-201ENST00000377453 PDS5AQ29RF7 1337 aaKnown RBP22.81■■□□□ 1.24
CLN5-201ENST00000377453 PSMA7O14818 248 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 FAM182BQ5T319 152 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 TRAPPC11Q7Z392 1133 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 CABP7Q86V35 215 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 UIMC1Q96RL1 719 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 KBTBD4Q9NVX7 518 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 MKRN1Q9UHC7 482 aaKnown RBP22.81■■□□□ 1.24
CLN5-201ENST00000377453 FLT1P17948 1338 aa22.81■■□□□ 1.24
CLN5-201ENST00000377453 ATP2B2Q01814 1243 aa22.8■■□□□ 1.24
CLN5-201ENST00000377453 GIMAP8Q8ND71 665 aaPredicted RBP22.8■■□□□ 1.24
CLN5-201ENST00000377453 HNRNPLLQ8WVV9 542 aaKnown RBP22.8■■□□□ 1.24
CLN5-201ENST00000377453 CNOT6LQ96LI5 555 aaKnown RBP22.8■■□□□ 1.24
CLN5-201ENST00000377453 DRC1Q96MC2 740 aa22.8■■□□□ 1.24
CLN5-201ENST00000377453 TMEM260Q9NX78 707 aa22.8■■□□□ 1.24
CLN5-201ENST00000377453 CAPN11Q9UMQ6 739 aa22.8■■□□□ 1.24
CLN5-201ENST00000377453 EP400Q96L91 3159 aa22.8■■□□□ 1.24
CLN5-201ENST00000377453 TBC1D8BQ0IIM8 1120 aa22.8■■□□□ 1.24
CLN5-201ENST00000377453 ZSCAN26Q16670 478 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms