RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 GOPCQ9HD26 462 aa13.84□□□□□ -0.19
USF1-203ENST00000368021 CSADQ9Y600 493 aa13.84□□□□□ -0.19
USF1-203ENST00000368021 ATAD5Q96QE3 1844 aa13.84□□□□□ -0.19
USF1-203ENST00000368021 STXBP3O00186 592 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 NDUFB10O96000 172 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 SLC10A3P09131 477 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 NLRP5P59047 1200 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 NOGQ13253 232 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 NR5A1Q13285 461 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 ANO1Q5XXA6 986 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 KCTD1Q719H9 257 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 ADGRF4Q8IZF3 695 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 JMYQ8N9B5 988 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 DAGLBQ8NCG7 672 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 LINC00301Q8NCQ3 95 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 KCNG4Q8TDN1 519 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 OXER1Q8TDS5 423 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 PIBF1Q8WXW3 757 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 TRIM44Q96DX7 344 aaPredicted RBP13.83□□□□□ -0.2
USF1-203ENST00000368021 FTOQ9C0B1 505 aaKnown RBP eCLIP13.83□□□□□ -0.2
USF1-203ENST00000368021 CPVLQ9H3G5 476 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 JMJD4Q9H9V9 463 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 GPCPD1Q9NPB8 672 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 ZNF112Q9UJU3 913 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 PNMA6FA0A0J9YX94 578 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 CEBPZQ03701 1054 aaKnown RBP13.83□□□□□ -0.2
USF1-203ENST00000368021 HEATR3Q7Z4Q2 680 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 GPKOWQ92917 476 aaPredicted RBP eCLIP13.83□□□□□ -0.2
USF1-203ENST00000368021 TNFRSF25Q93038 417 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 PIGSQ96S52 555 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 ZMYND12Q9H0C1 365 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 PCDHA4Q9UN74 947 aa13.83□□□□□ -0.2
USF1-203ENST00000368021 ESYT2A0FGR8 921 aa13.82□□□□□ -0.2
USF1-203ENST00000368021 GOLGA6L4A6NEF3 574 aa13.82□□□□□ -0.2
USF1-203ENST00000368021 BMP3P12645 472 aa13.82□□□□□ -0.2
USF1-203ENST00000368021 TTBK2Q6IQ55 1244 aa13.82□□□□□ -0.2
USF1-203ENST00000368021 TYW1BQ6NUM6 668 aa13.82□□□□□ -0.2
USF1-203ENST00000368021 BTNL9Q6UXG8 535 aa13.82□□□□□ -0.2
USF1-203ENST00000368021 HOMER1Q86YM7 354 aa13.82□□□□□ -0.2
USF1-203ENST00000368021 SYAP1Q96A49 352 aaPredicted RBP13.82□□□□□ -0.2
USF1-203ENST00000368021 OPTNQ96CV9 577 aa13.82□□□□□ -0.2
USF1-203ENST00000368021 OTUD5Q96G74 571 aa13.82□□□□□ -0.2
USF1-203ENST00000368021 VAT1LQ9HCJ6 419 aa13.82□□□□□ -0.2
USF1-203ENST00000368021 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.82□□□□□ -0.2
USF1-203ENST00000368021 CLIC4Q9Y696 253 aa13.82□□□□□ -0.2
USF1-203ENST00000368021 FSD2A1L4K1 749 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 ZBTB5O15062 677 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 RAD21O60216 631 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 GNA11P29992 359 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 MAP2K2P36507 400 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 SLC39A14Q15043 492 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 STK38Q15208 465 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 SPRYD7Q5W111 196 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 PPP1R18Q6NYC8 613 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 CAVIN1Q6NZI2 390 aaKnown RBP13.81□□□□□ -0.2
USF1-203ENST00000368021 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.81□□□□□ -0.2
USF1-203ENST00000368021 BLIDQ8IZY5 108 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 ACER1Q8TDN7 264 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 PGBD1Q96JS3 809 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 VCPKMTQ9H867 229 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.81□□□□□ -0.2
USF1-203ENST00000368021 SNCAIPQ9Y6H5 919 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 MORC2Q9Y6X9 1032 aaPredicted RBP13.81□□□□□ -0.2
USF1-203ENST00000368021 DOCK1Q14185 1865 aa13.81□□□□□ -0.2
USF1-203ENST00000368021 ESPNB1AK53 854 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 M0R2N6 131 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 SPTLC2O15270 562 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 GJA5P36382 358 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 TRAPPC10P48553 1259 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 TOB1P50616 345 aaPredicted RBP13.8□□□□□ -0.2
USF1-203ENST00000368021 NAPAP54920 295 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 SF3A1Q15459 793 aaKnown RBP13.8□□□□□ -0.2
USF1-203ENST00000368021 WNK4Q96J92 1243 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 GZF1Q9H116 711 aaPredicted RBP13.8□□□□□ -0.2
USF1-203ENST00000368021 PLA2G6O60733 806 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 PPP6R2O75170 966 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 SLC16A2P36021 539 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 ME1P48163 572 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 PTPAQ15257 358 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 ADALQ6DHV7 355 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 CCDC84Q86UT8 332 aaPredicted RBP13.8□□□□□ -0.2
USF1-203ENST00000368021 BICD2Q8TD16 824 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 C6orf50Q9HD87 102 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 TSKSQ9UJT2 592 aa13.8□□□□□ -0.2
USF1-203ENST00000368021 NOL7Q9UMY1 257 aaKnown RBP13.8□□□□□ -0.2
USF1-203ENST00000368021 CENPFP49454 3210 aa13.79□□□□□ -0.2
USF1-203ENST00000368021 USP17L10C9JJH3 530 aa13.79□□□□□ -0.2
USF1-203ENST00000368021 KIF20AO95235 890 aa13.79□□□□□ -0.2
USF1-203ENST00000368021 HSPA1AP0DMV8 641 aaKnown RBP13.79□□□□□ -0.2
USF1-203ENST00000368021 HSPA1BP0DMV9 641 aaKnown RBP13.79□□□□□ -0.2
USF1-203ENST00000368021 STAT2P52630 851 aa13.79□□□□□ -0.2
USF1-203ENST00000368021 MAP2K1Q02750 393 aaPredicted RBP13.79□□□□□ -0.2
USF1-203ENST00000368021 SCYL3Q8IZE3 742 aa13.79□□□□□ -0.2
USF1-203ENST00000368021 IPO4Q8TEX9 1081 aaKnown RBP13.79□□□□□ -0.2
USF1-203ENST00000368021 LPAR1Q92633 364 aa13.79□□□□□ -0.2
USF1-203ENST00000368021 BEGAINQ9BUH8 593 aa13.79□□□□□ -0.2
USF1-203ENST00000368021 KIAA1683Q9H0B3 1180 aa13.79□□□□□ -0.2
USF1-203ENST00000368021 TMEM63CQ9P1W3 806 aa13.79□□□□□ -0.2
USF1-203ENST00000368021 CEP131Q9UPN4 1083 aa13.79□□□□□ -0.2
USF1-203ENST00000368021 A0A1W2PQ27 194 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms