RNA–Protein interactions for RNA: ENST00000299518.6

IDH3A-201, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IDH3A, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-201ENST00000299518 MYH1P12882 1939 aa12.6□□□□□ -0.39
IDH3A-201ENST00000299518 PDS5AQ29RF7 1337 aaKnown RBP12.6□□□□□ -0.39
IDH3A-201ENST00000299518 RBM17Q96I25 401 aaKnown RBP12.6□□□□□ -0.39
IDH3A-201ENST00000299518 SMCHD1A6NHR9 2005 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 POTEMA6NI47 508 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 SLC37A4O43826 429 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 EDIL3O43854 480 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 IL1R1P14778 569 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 ERCC5P28715 1186 aaPredicted RBP12.59□□□□□ -0.39
IDH3A-201ENST00000299518 KIAA0825Q8IV33 1275 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 CHP1Q99653 195 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 PARP3Q9Y6F1 533 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 NAV1Q8NEY1 1877 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 GSTO1P78417 241 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 CCDC178Q5BJE1 867 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 TRIML1Q8N9V2 468 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 DACH1Q9UI36 760 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.59□□□□□ -0.39
IDH3A-201ENST00000299518 CCDC93Q567U6 631 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 DYMQ7RTS9 669 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 NHSQ6T4R5 1651 aa12.59□□□□□ -0.39
IDH3A-201ENST00000299518 AKR1B15C9JRZ8 316 aaPredicted RBP12.58□□□□□ -0.4
IDH3A-201ENST00000299518 ARHGAP6O43182 974 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 PPP1R11O60927 126 aaPredicted RBP12.58□□□□□ -0.4
IDH3A-201ENST00000299518 PDHBP11177 359 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 CALML3P27482 149 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 STK4Q13043 487 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 PAK1Q13153 545 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 ARHGAP29Q52LW3 1261 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 POLD4Q9HCU8 107 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 PPEF1O14829 653 aaPredicted RBP12.58□□□□□ -0.4
IDH3A-201ENST00000299518 SEC31AO94979 1220 aaKnown RBP12.58□□□□□ -0.4
IDH3A-201ENST00000299518 LDHCP07864 332 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 ERVK-24P63145 666 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 USP40Q9NVE5 1235 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 KCNJ18B7U540 433 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 GTPBP6O43824 516 aaPredicted RBP12.58□□□□□ -0.4
IDH3A-201ENST00000299518 KLRC4O43908 158 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 ATP2B4P23634 1241 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 KCNJ12Q14500 433 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 NEDD1Q8NHV4 660 aa12.58□□□□□ -0.4
IDH3A-201ENST00000299518 ZNF622Q969S3 477 aaKnown RBP eCLIP12.58□□□□□ -0.4
IDH3A-201ENST00000299518 SRRTQ9BXP5 876 aaKnown RBP12.58□□□□□ -0.4
IDH3A-201ENST00000299518 NRDCO43847 1150 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 RAD51AP2Q09MP3 1159 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 SLC30A10Q6XR72 485 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 PPFIBP1Q86W92 1011 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 COL23A1Q86Y22 540 aaPredicted RBP12.57□□□□□ -0.4
IDH3A-201ENST00000299518 ELOA2Q8IYF1 753 aaPredicted RBP12.57□□□□□ -0.4
IDH3A-201ENST00000299518 SCAF8Q9UPN6 1271 aaKnown RBP12.57□□□□□ -0.4
IDH3A-201ENST00000299518 CENPFP49454 3210 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 LY75O60449 1722 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 PBX1P40424 430 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 UBXN1Q04323 297 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 NUP88Q99567 741 aaPredicted RBP12.57□□□□□ -0.4
IDH3A-201ENST00000299518 MMTAG2Q9BU76 263 aaKnown RBP12.57□□□□□ -0.4
IDH3A-201ENST00000299518 L2HGDHQ9H9P8 463 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 TNNI2P48788 182 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 COPB1P53618 953 aaKnown RBP12.57□□□□□ -0.4
IDH3A-201ENST00000299518 TCP11X2Q5H9J9 407 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 CERKQ8TCT0 537 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 SLC39A2Q9NP94 309 aa12.57□□□□□ -0.4
IDH3A-201ENST00000299518 CACNB1Q02641 598 aaPredicted RBP12.56□□□□□ -0.4
IDH3A-201ENST00000299518 KCNK18Q7Z418 384 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 CABP7Q86V35 215 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 ERO1AQ96HE7 468 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 SLF1Q9BQI6 1058 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 ZMYND12Q9H0C1 365 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 THSD7AQ9UPZ6 1657 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 ROBO3Q96MS0 1386 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 USP17L10C9JJH3 530 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 GLIPR1L2Q4G1C9 344 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 ZNF658Q5TYW1 1059 aaPredicted RBP12.56□□□□□ -0.4
IDH3A-201ENST00000299518 ANKS1AQ92625 1134 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 RRP36Q96EU6 259 aaKnown RBP12.56□□□□□ -0.4
IDH3A-201ENST00000299518 ZC3H12CQ9C0D7 883 aaKnown RBP12.56□□□□□ -0.4
IDH3A-201ENST00000299518 KANSL2Q9H9L4 492 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 KCND1Q9NSA2 647 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 MTMR4Q9NYA4 1195 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 PUF60Q9UHX1 559 aaKnown RBP12.56□□□□□ -0.4
IDH3A-201ENST00000299518 ZHX1Q9UKY1 873 aaPredicted RBP12.56□□□□□ -0.4
IDH3A-201ENST00000299518 STX10O60499 249 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 MFAP3LO75121 409 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 LONP1P36776 959 aaKnown RBP12.56□□□□□ -0.4
IDH3A-201ENST00000299518 TRAPPC10P48553 1259 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 RBM5P52756 815 aaKnown RBP eCLIP12.56□□□□□ -0.4
IDH3A-201ENST00000299518 LRRC41Q15345 812 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 ECM1Q16610 540 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 CCDC12Q8WUD4 166 aaPredicted RBP12.56□□□□□ -0.4
IDH3A-201ENST00000299518 SEC63Q9UGP8 760 aaKnown RBP12.56□□□□□ -0.4
IDH3A-201ENST00000299518 B4DLN1 442 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 BMP15O95972 392 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 ADGRG1Q9Y653 693 aa12.56□□□□□ -0.4
IDH3A-201ENST00000299518 USP17L15C9J2P7 530 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 USP17L13C9JLJ4 530 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 USP17L11C9JVI0 530 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 USP17L18D6R9N7 530 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 USP17L22D6RA61 530 aa12.55□□□□□ -0.4
IDH3A-201ENST00000299518 USP17L17D6RBQ6 530 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms