RNA–Protein interactions for RNA: ENST00000254940.9

NIP7-201, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIP7, Length 2,402 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-201ENST00000254940 CNTNAP5Q8WYK1 1306 aa13.95□□□□□ -0.18
NIP7-201ENST00000254940 CENPFP49454 3210 aa13.95□□□□□ -0.18
NIP7-201ENST00000254940 C19orf81C9J6K1 198 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 CXCL11O14625 94 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 CALM1P0DP23 149 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 CALM2P0DP24 149 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 CALM3P0DP25 149 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 GTF2A2P52657 109 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 SYDE2Q5VT97 1194 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 GMCL1Q96IK5 515 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 MTA3Q9BTC8 594 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 ASCC2Q9H1I8 757 aaPredicted RBP13.94□□□□□ -0.18
NIP7-201ENST00000254940 RAVER2Q9HCJ3 691 aaKnown RBP13.94□□□□□ -0.18
NIP7-201ENST00000254940 TSKSQ9UJT2 592 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 KCNJ14Q9UNX9 436 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 ATP6V1DQ9Y5K8 247 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 WDR46O15213 610 aaKnown RBP13.94□□□□□ -0.18
NIP7-201ENST00000254940 PPP1R11O60927 126 aaPredicted RBP13.94□□□□□ -0.18
NIP7-201ENST00000254940 IRX3P78415 501 aaPredicted RBP13.94□□□□□ -0.18
NIP7-201ENST00000254940 FUT2Q10981 343 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 ASPRV1Q53RT3 343 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 HEATR3Q7Z4Q2 680 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 AGBL1Q96MI9 1066 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 LLPHQ9BRT6 129 aaKnown RBP13.94□□□□□ -0.18
NIP7-201ENST00000254940 GINM1Q9NU53 330 aa13.94□□□□□ -0.18
NIP7-201ENST00000254940 CETPP11597 493 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 SSRP1Q08945 709 aaKnown RBP13.93□□□□□ -0.18
NIP7-201ENST00000254940 CDC37Q16543 378 aaPredicted RBP13.93□□□□□ -0.18
NIP7-201ENST00000254940 NOM1Q5C9Z4 860 aaKnown RBP13.93□□□□□ -0.18
NIP7-201ENST00000254940 CATSPERGQ6ZRH7 1159 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 HOMEZQ8IX15 550 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 SLF1Q9BQI6 1058 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 VPS54Q9P1Q0 977 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 LIG1P18858 919 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 KRT85P78386 507 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 CAMK4Q16566 473 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 QRICH1Q2TAL8 776 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 TMEM87AQ8NBN3 555 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 TXNRD2Q9NNW7 524 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 AGTPBP1Q9UPW5 1226 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 RLFQ13129 1914 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 PARP14Q460N5 1801 aa13.93□□□□□ -0.18
NIP7-201ENST00000254940 SPDYE16A6NNV3 312 aaPredicted RBP13.92□□□□□ -0.18
NIP7-201ENST00000254940 ZBTB48P10074 688 aaPredicted RBP13.92□□□□□ -0.18
NIP7-201ENST00000254940 UBE2HP62256 183 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 SH3D19Q5HYK7 790 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 PPP4R3BQ5MIZ7 849 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 TYW1BQ6NUM6 668 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 LPAR1Q92633 364 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 SPATA32Q96LK8 384 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 CPA4Q9UI42 421 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 LOC285556D6RIA3 1793 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 USP17L15C9J2P7 530 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 USP17L13C9JLJ4 530 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 USP17L11C9JVI0 530 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 USP17L18D6R9N7 530 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 USP17L22D6RA61 530 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 USP17L17D6RBQ6 530 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 USP17L19D6RCP7 530 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 USP17L20D6RJB6 530 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 USP17L24Q0WX57 530 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 GPATCH4Q5T3I0 446 aaKnown RBP13.92□□□□□ -0.18
NIP7-201ENST00000254940 WDR78Q5VTH9 848 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 ANKRD13CQ8N6S4 541 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 SMCR8Q8TEV9 937 aaPredicted RBP13.92□□□□□ -0.18
NIP7-201ENST00000254940 LEO1Q8WVC0 666 aaPredicted RBP13.92□□□□□ -0.18
NIP7-201ENST00000254940 CCDC102AQ96A19 550 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 PGBD1Q96JS3 809 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 USP28Q96RU2 1077 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 RBM28Q9NW13 759 aaKnown RBP13.92□□□□□ -0.18
NIP7-201ENST00000254940 BTBD7Q9P203 1132 aa13.92□□□□□ -0.18
NIP7-201ENST00000254940 RASSF10A6NK89 507 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 MBD3O95983 291 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 MRE11P49959 708 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 ZNF445P59923 1031 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 HMGN5P82970 282 aaKnown RBP13.91□□□□□ -0.18
NIP7-201ENST00000254940 AKAP17AQ02040 695 aaKnown RBP13.91□□□□□ -0.18
NIP7-201ENST00000254940 COG2Q14746 738 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 PKN1Q16512 942 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 FASTKD5Q7L8L6 764 aaKnown RBP13.91□□□□□ -0.18
NIP7-201ENST00000254940 C12orf42Q96LP6 360 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 FEM1BQ9UK73 627 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 PPP1R9AQ9ULJ8 1098 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 RIPK3Q9Y572 518 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 CTDP1Q9Y5B0 961 aaPredicted RBP13.91□□□□□ -0.18
NIP7-201ENST00000254940 FAM205CA6NFA0 338 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 IFNAR1P17181 557 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 HERVK_113P62684 666 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 L1TD1Q5T7N2 865 aaKnown RBP13.91□□□□□ -0.18
NIP7-201ENST00000254940 WWC2Q6AWC2 1192 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 PROCA1Q8NCQ7 364 aaPredicted RBP13.91□□□□□ -0.18
NIP7-201ENST00000254940 OXER1Q8TDS5 423 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 TBC1D5Q92609 795 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 RRP36Q96EU6 259 aaKnown RBP13.91□□□□□ -0.18
NIP7-201ENST00000254940 C8orf76Q96K31 380 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 ALG1Q9BT22 464 aa13.91□□□□□ -0.18
NIP7-201ENST00000254940 CCDC196A0A1B0GTZ2 297 aa13.9□□□□□ -0.18
NIP7-201ENST00000254940 VWA5AO00534 786 aa13.9□□□□□ -0.18
NIP7-201ENST00000254940 FMNL1O95466 1100 aaPredicted RBP13.9□□□□□ -0.18
NIP7-201ENST00000254940 TBC1D8O95759 1140 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms