RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 NFIAQ12857 509 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 RTN1Q16799 776 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 STRIP1Q5VSL9 837 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 APOBEC3HQ6NTF7 200 aaKnown RBP19.18■□□□□ 0.66
FOXA1-201ENST00000250448 CDC42EP5Q6NZY7 148 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 TEKT1Q969V4 418 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 MTMR7Q9Y216 660 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 SOWAHDA6NJG2 315 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 PLCG2P16885 1265 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 FUT8Q9BYC5 575 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 SRPRBQ9Y5M8 271 aaKnown RBP19.18■□□□□ 0.66
FOXA1-201ENST00000250448 AMOTL1Q8IY63 956 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 LARGE2Q8N3Y3 721 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 SPATA20Q8TB22 786 aa19.18■□□□□ 0.66
FOXA1-201ENST00000250448 BAZ2BQ9UIF8 2168 aaKnown RBP19.17■□□□□ 0.66
FOXA1-201ENST00000250448 hCG_1642624A0A1W2PR95 340 aa19.17■□□□□ 0.66
FOXA1-201ENST00000250448 NR5A1Q13285 461 aa19.17■□□□□ 0.66
FOXA1-201ENST00000250448 ZCCHC17Q9NP64 241 aaKnown RBP19.17■□□□□ 0.66
FOXA1-201ENST00000250448 CEP131Q9UPN4 1083 aa19.17■□□□□ 0.66
FOXA1-201ENST00000250448 COL4A5P29400 1685 aa19.17■□□□□ 0.66
FOXA1-201ENST00000250448 DLEC1Q9Y238 1755 aa19.17■□□□□ 0.66
FOXA1-201ENST00000250448 MAPK8IP2Q13387 824 aaPredicted RBP19.17■□□□□ 0.66
FOXA1-201ENST00000250448 CC2D2BQ6DHV5 1058 aa19.17■□□□□ 0.66
FOXA1-201ENST00000250448 ZFPM1Q8IX07 1006 aa19.17■□□□□ 0.66
FOXA1-201ENST00000250448 IRX2Q9BZI1 471 aaPredicted RBP19.17■□□□□ 0.66
FOXA1-201ENST00000250448 PIM2Q9P1W9 311 aa19.17■□□□□ 0.66
FOXA1-201ENST00000250448 SUGT1Q9Y2Z0 365 aa19.17■□□□□ 0.66
FOXA1-201ENST00000250448 CCDC151A5D8V7 595 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 DEXIO95424 95 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 TCP10Q12799 353 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 RAD9BQ6WBX8 426 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 APTXQ7Z2E3 356 aaKnown RBP19.16■□□□□ 0.66
FOXA1-201ENST00000250448 NAA15Q9BXJ9 866 aaKnown RBP19.16■□□□□ 0.66
FOXA1-201ENST00000250448 CSRNP2Q9H175 543 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 IL17RBQ9NRM6 502 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 ADGRG1Q9Y653 693 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 MYH1P12882 1939 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 TULP2O00295 520 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 TEX33O43247 280 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 CHMP4BP1P59074 171 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 GPS2Q13227 327 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 BRD3Q15059 726 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 LONRF2Q1L5Z9 754 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 USP49Q70CQ1 688 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 FANCBQ8NB91 859 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 ZBTB12Q9Y330 459 aaPredicted RBP19.16■□□□□ 0.66
FOXA1-201ENST00000250448 SYNRGQ9UMZ2 1314 aa19.16■□□□□ 0.66
FOXA1-201ENST00000250448 CDK8P49336 464 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 SRGAP1Q7Z6B7 1085 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 PPFIBP1Q86W92 1011 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 RTKN2Q8IZC4 609 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 SUPT20HQ8NEM7 779 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 LZTFL1Q9NQ48 299 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 ATP2B1P20020 1258 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 IGSF22Q8N9C0 903 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 TSPY3P0CV98 308 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 TSPY8P0CW00 308 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 PCP11498 1178 aaKnown RBP19.15■□□□□ 0.66
FOXA1-201ENST00000250448 RASA1P20936 1047 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 RBL2Q08999 1139 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 CT47A1Q5JQC4 288 aaPredicted RBP19.15■□□□□ 0.66
FOXA1-201ENST00000250448 SPATA1Q5VX52 437 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 RCSD1Q6JBY9 416 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 ZNF444Q8N0Y2 327 aaPredicted RBP19.15■□□□□ 0.66
FOXA1-201ENST00000250448 CRACR2BQ8N4Y2 399 aaPredicted RBP19.15■□□□□ 0.66
FOXA1-201ENST00000250448 OXER1Q8TDS5 423 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 ZSWIM4Q9H7M6 989 aa19.15■□□□□ 0.66
FOXA1-201ENST00000250448 MYH6P13533 1939 aa19.14■□□□□ 0.65
FOXA1-201ENST00000250448 KIF5CO60282 957 aa19.14■□□□□ 0.65
FOXA1-201ENST00000250448 PLEKHA8P1O95397 391 aa19.14■□□□□ 0.65
FOXA1-201ENST00000250448 HHIPL2Q6UWX4 724 aa19.14■□□□□ 0.65
FOXA1-201ENST00000250448 TMTC2Q8N394 836 aa19.14■□□□□ 0.65
FOXA1-201ENST00000250448 PBX1P40424 430 aa19.14■□□□□ 0.65
FOXA1-201ENST00000250448 RASGRP2Q7LDG7 609 aa19.14■□□□□ 0.65
FOXA1-201ENST00000250448 DALRD3Q5D0E6 543 aaKnown RBP19.13■□□□□ 0.65
FOXA1-201ENST00000250448 MUM1L1Q5H9M0 696 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 KLHL10Q6JEL2 608 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 CATIPQ7Z7H3 387 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 CDC23Q9UJX2 597 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 BCS1LQ9Y276 419 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 FAM196BA6NMK8 535 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 PSMD14O00487 310 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 MFAP3LO75121 409 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 CUL4BQ13620 913 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 CEP112Q8N8E3 955 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 CABP5Q9NP86 173 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 ADD3Q9UEY8 706 aaKnown RBP19.13■□□□□ 0.65
FOXA1-201ENST00000250448 STX8Q9UNK0 236 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 ROBO3Q96MS0 1386 aa19.13■□□□□ 0.65
FOXA1-201ENST00000250448 DDX60LQ5H9U9 1706 aaKnown RBP19.12■□□□□ 0.65
FOXA1-201ENST00000250448 A0A0U1RQJ8 604 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 CCDC196A0A1B0GTZ2 297 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 MAP2K7O14733 419 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 CD44P16070 742 aaKnown RBP19.12■□□□□ 0.65
FOXA1-201ENST00000250448 STX17P56962 302 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 TGFB2P61812 414 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 TROAPQ12815 778 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 CDKAL1Q5VV42 579 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 CERS3Q8IU89 383 aa19.12■□□□□ 0.65
FOXA1-201ENST00000250448 CPLX3Q8WVH0 158 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms