RNA–Protein interactions for RNA: ENSMUST00000113690.7

Tpm1-209, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 3 BASIC

Gene Tpm1, Length 2,890 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-209ENSMUST00000113690 Ccdc38Q8CDN8 563 aa16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Peg12Q9WVA7 283 aa16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Znfx1Q8R151 1909 aaKnown RBP16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Etnk2A7MCT6 385 aa16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Tcp10bE9PYJ0 438 aa16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Tmem132bF7BAB2 1078 aa16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Sec24cG3X972 1096 aaKnown RBP16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Ptpn12P35831 775 aa16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 HdgfP51859 237 aaKnown RBP16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Stim2P83093 746 aa16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Ifit1bl2Q3U687 466 aa16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Mum1l1Q4VA55 681 aa16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Vipas39Q8BGQ1 491 aa16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Fam177a1Q8BR63 207 aa16.47■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Zfp853A0A1D5RM95 733 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Islr2Q5RKR3 745 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Vcpip1Q8CDG3 1220 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Nol7Q9D7Z3 254 aaKnown RBP16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Nrxn3Q6P9K9 1571 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Ankrd31A0A140LI88 1765 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Pfkfb3A7UAK5 555 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Ppp1r21Q3TDD9 780 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Exoc5Q3TPX4 708 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Slc9b1Q8C0X2 565 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Def6Q8C2K1 630 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Usp15Q8R5H1 981 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 KynuQ9CXF0 464 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 ParvgQ9ERD8 331 aa16.46■□□□□ 0.23
Tpm1-209ENSMUST00000113690 Trim55G3X8Y1 545 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Slc7a3P70423 618 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Tubb5P99024 444 aaKnown RBP16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Zfp781Q0P5U5 243 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Aak1Q3UHJ0 959 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Ccdc42Q5SV66 316 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Kdm1aQ6ZQ88 853 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Cxcl11Q9JHH5 100 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Irx5Q9JKQ4 484 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Klra17Q9JMA4 273 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Ccdc88aQ5SNZ0 1873 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Nap1l1P28656 391 aaKnown RBP16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Fxr1Q61584 677 aaKnown RBP16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Krt42Q6IFX2 452 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Ccdc148Q6P5U8 527 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Rab11fip4Q8BQP8 635 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 NsmfQ99NF2 532 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Ipo7Q9EPL8 1038 aaKnown RBP16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 SyncQ9EPM5 470 aa16.45■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Fam186bD3Z420 943 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Nfil3O08750 462 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Prl2c2P04095 224 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Znf697Q569E7 569 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Mcm7Q61881 719 aaKnown RBP16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Asic1Q6NXK8 526 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Ppp2r5bQ6PD28 497 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Mmtag2Q99LX5 260 aaKnown RBP16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Dynll2Q9D0M5 89 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Herc3A6H6S0 1050 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 PurbO35295 324 aaKnown RBP16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Mx1P09922 631 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Tmem35bQ3U0Y2 150 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Znf280dQ68FE8 974 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Krt40Q6IFX3 439 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Stap2Q8R0L1 411 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Trub2Q91WG3 331 aaKnown RBP16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Cdhr2E9Q7P9 1308 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Bcl9lQ67FY2 1494 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Speer4aF8VPX6 267 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Vmn2r78K7N6U5 853 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Prl7d1P04769 244 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Kcna1P16388 495 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Sik1Q60670 779 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Tekt3Q6X6Z7 490 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 F13a1Q8BH61 732 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Nr2e3Q9QXZ7 395 aa16.44■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Snapc4Q8BP86 1333 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 E9QMW4 1145 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Calm1P0DP26 149 aaKnown RBP16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Calm2P0DP27 149 aaKnown RBP16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Calm3P0DP28 149 aaKnown RBP16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 SarsP26638 512 aaKnown RBP16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Ftl1P29391 183 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Ssrp1Q08943 708 aaKnown RBP16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 NntQ61941 1086 aaKnown RBP16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Eif3cQ8R1B4 911 aaKnown RBP16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Myh8P13542 1937 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Ankrd63A2ARS0 390 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 ChkbO55229 394 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Il27raO70394 623 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Fkbp1aP26883 108 aaKnown RBP16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Serpinb6dQ3UWK8 375 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Jmjd4Q8BFT6 427 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Parp10Q8CIE4 960 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Eif4a3Q91VC3 411 aaKnown RBP16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Fbxo3Q9DC63 480 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Orc1Q9Z1N2 840 aaKnown RBP16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Trip6Q9Z1Y4 480 aa16.43■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Bicdl1A0JNT9 577 aa16.42■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Izumo3A6PWV3 263 aa16.42■□□□□ 0.22
Tpm1-209ENSMUST00000113690 NpcdF8VQB8 469 aa16.42■□□□□ 0.22
Tpm1-209ENSMUST00000113690 Slc9a2Q3ZAS0 814 aa16.42■□□□□ 0.22
Retrieved 100 of 22,080 RNA–protein pairs in 37.3 ms