RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 SGMS1Q86VZ5 419 aa22.06■■□□□ 1.12
CCDC9-205ENST00000600117 U2AF1L4Q8WU68 220 aaKnown RBP22.06■■□□□ 1.12
CCDC9-205ENST00000600117 GMCL1Q96IK5 515 aa22.06■■□□□ 1.12
CCDC9-205ENST00000600117 WDR46O15213 610 aaKnown RBP22.05■■□□□ 1.12
CCDC9-205ENST00000600117 SNHG28P0DPA3 235 aa22.05■■□□□ 1.12
CCDC9-205ENST00000600117 HOXA7P31268 230 aaPredicted RBP22.05■■□□□ 1.12
CCDC9-205ENST00000600117 Q6ZUG5 572 aa22.05■■□□□ 1.12
CCDC9-205ENST00000600117 TMTC2Q8N394 836 aa22.05■■□□□ 1.12
CCDC9-205ENST00000600117 SLAIN1Q8ND83 568 aa22.05■■□□□ 1.12
CCDC9-205ENST00000600117 NUP88Q99567 741 aaPredicted RBP22.05■■□□□ 1.12
CCDC9-205ENST00000600117 RPAP3Q9H6T3 665 aaPredicted RBP22.05■■□□□ 1.12
CCDC9-205ENST00000600117 SLC45A1Q9Y2W3 748 aa22.05■■□□□ 1.12
CCDC9-205ENST00000600117 SOX1O00570 391 aaPredicted RBP22.04■■□□□ 1.12
CCDC9-205ENST00000600117 RAD21O60216 631 aa22.04■■□□□ 1.12
CCDC9-205ENST00000600117 PDHBP11177 359 aa22.04■■□□□ 1.12
CCDC9-205ENST00000600117 CAPN2P17655 700 aa22.04■■□□□ 1.12
CCDC9-205ENST00000600117 TOB2Q14106 344 aaPredicted RBP22.04■■□□□ 1.12
CCDC9-205ENST00000600117 FAM83BQ5T0W9 1011 aa22.04■■□□□ 1.12
CCDC9-205ENST00000600117 PDRG1Q9NUG6 133 aa22.04■■□□□ 1.12
CCDC9-205ENST00000600117 EVI5O60447 810 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 SGPL1O95470 568 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 MNX1P50219 401 aaPredicted RBP22.03■■□□□ 1.12
CCDC9-205ENST00000600117 FCGRTP55899 365 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 PRKCZQ05513 592 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 TROAPQ12815 778 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 CATSPERGQ6ZRH7 1159 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 DCAF4Q8WV16 495 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 UNC93B1Q9H1C4 597 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 ALDH8A1Q9H2A2 487 aaPredicted RBP22.03■■□□□ 1.12
CCDC9-205ENST00000600117 BRPF3Q9ULD4 1205 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 MTMR7Q9Y216 660 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 RLFQ13129 1914 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 PARP14Q460N5 1801 aa22.03■■□□□ 1.12
CCDC9-205ENST00000600117 USP17L15C9J2P7 530 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 USP17L13C9JLJ4 530 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 USP17L11C9JVI0 530 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 USP17L18D6R9N7 530 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 USP17L22D6RA61 530 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 USP17L17D6RBQ6 530 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 USP17L19D6RCP7 530 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 USP17L20D6RJB6 530 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 BCRP11274 1271 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 BMP3P12645 472 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 SLC1A4P43007 532 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 USP17L24Q0WX57 530 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 NFXL1Q6ZNB6 911 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 ZNF654Q8IZM8 581 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 BRF1Q92994 677 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 CHMP4CQ96CF2 233 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 LRCH3Q96II8 777 aa22.02■■□□□ 1.12
CCDC9-205ENST00000600117 PARK7Q99497 189 aaKnown RBP22.02■■□□□ 1.12
CCDC9-205ENST00000600117 CCDC69A6NI79 296 aa22.01■■□□□ 1.11
CCDC9-205ENST00000600117 NEK4P51957 841 aa22.01■■□□□ 1.11
CCDC9-205ENST00000600117 ZNF543Q08ER8 600 aa22.01■■□□□ 1.11
CCDC9-205ENST00000600117 PABPC4Q13310 644 aaKnown RBP eCLIP22.01■■□□□ 1.11
CCDC9-205ENST00000600117 CATIPQ7Z7H3 387 aa22.01■■□□□ 1.11
CCDC9-205ENST00000600117 ASCC2Q9H1I8 757 aaPredicted RBP22.01■■□□□ 1.11
CCDC9-205ENST00000600117 ALPK3Q96L96 1907 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 DDAH1O94760 285 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 EVCP57679 992 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 FGD1P98174 961 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 APOBRQ0VD83 1088 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 GRM4Q14833 912 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 RABEP1Q15276 862 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 CCDC96Q2M329 555 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 APOA5Q6Q788 366 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 KCTD1Q719H9 257 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 MYL10Q9BUA6 226 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 TANGO6Q9C0B7 1094 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 FBXO28Q9NVF7 368 aa22■■□□□ 1.11
CCDC9-205ENST00000600117 LAMA2P24043 3122 aaKnown RBP22■■□□□ 1.11
CCDC9-205ENST00000600117 FRMPD2Q68DX3 1309 aaPredicted RBP22■■□□□ 1.11
CCDC9-205ENST00000600117 KLF18A0A0U1RQI7 1052 aa21.99■■□□□ 1.11
CCDC9-205ENST00000600117 CYP2C8P10632 490 aa21.99■■□□□ 1.11
CCDC9-205ENST00000600117 AK2P54819 239 aa21.99■■□□□ 1.11
CCDC9-205ENST00000600117 P2RX7Q99572 595 aaKnown RBP21.99■■□□□ 1.11
CCDC9-205ENST00000600117 GABRQQ9UN88 632 aa21.99■■□□□ 1.11
CCDC9-205ENST00000600117 SLC12A7Q9Y666 1083 aa21.99■■□□□ 1.11
CCDC9-205ENST00000600117 TMEM232C9JQI7 657 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 ADCY3O60266 1144 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 PLA2G6O60733 806 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 IRX3P78415 501 aaPredicted RBP21.98■■□□□ 1.11
CCDC9-205ENST00000600117 ASPRV1Q53RT3 343 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 GPATCH4Q5T3I0 446 aaKnown RBP21.98■■□□□ 1.11
CCDC9-205ENST00000600117 TTBK2Q6IQ55 1244 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 GPR153Q6NV75 609 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 POTEEQ6S8J3 1075 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 RAB11FIP4Q86YS3 637 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 MAP3K14Q99558 947 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 GPCPD1Q9NPB8 672 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 MAD2L2Q9UI95 211 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 FEM1BQ9UK73 627 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 PNMA3Q9UL41 463 aa21.98■■□□□ 1.11
CCDC9-205ENST00000600117 PALM3A6NDB9 673 aaPredicted RBP21.97■■□□□ 1.11
CCDC9-205ENST00000600117 SPDYE16A6NNV3 312 aaPredicted RBP21.97■■□□□ 1.11
CCDC9-205ENST00000600117 FLOT1O75955 427 aa21.97■■□□□ 1.11
CCDC9-205ENST00000600117 TFRCP02786 760 aaKnown RBP21.97■■□□□ 1.11
CCDC9-205ENST00000600117 GOLGA8HP0CJ92 632 aa21.97■■□□□ 1.11
CCDC9-205ENST00000600117 RXRAP19793 462 aa21.97■■□□□ 1.11
CCDC9-205ENST00000600117 DSG3P32926 999 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms