RNA–Protein interactions for RNA: ENST00000591462.5

PRKCSH-212, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PRKCSH, Length 2,209 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-212ENST00000591462 TRIM10Q9UDY6 481 aa16.17■□□□□ 0.18
PRKCSH-212ENST00000591462 REXO2Q9Y3B8 237 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-212ENST00000591462 V9GY48 417 aaPredicted RBP16.17■□□□□ 0.18
PRKCSH-212ENST00000591462 MINDY4BA8MYZ0 360 aa16.17■□□□□ 0.18
PRKCSH-212ENST00000591462 IL6STP40189 918 aaPredicted RBP16.17■□□□□ 0.18
PRKCSH-212ENST00000591462 COPB1P53618 953 aaKnown RBP16.17■□□□□ 0.18
PRKCSH-212ENST00000591462 CASP8Q14790 479 aa16.17■□□□□ 0.18
PRKCSH-212ENST00000591462 WHAMMP3Q1A5X7 153 aa16.17■□□□□ 0.18
PRKCSH-212ENST00000591462 IQUBQ8NA54 791 aa16.17■□□□□ 0.18
PRKCSH-212ENST00000591462 CHP1Q99653 195 aa16.17■□□□□ 0.18
PRKCSH-212ENST00000591462 CTAGE15A4D2H0 777 aa16.16■□□□□ 0.18
PRKCSH-212ENST00000591462 TRIM66O15016 1216 aa16.16■□□□□ 0.18
PRKCSH-212ENST00000591462 ERLIN1O75477 346 aa16.16■□□□□ 0.18
PRKCSH-212ENST00000591462 CTAGE8P0CG41 777 aa16.16■□□□□ 0.18
PRKCSH-212ENST00000591462 PTGDRQ13258 359 aa16.16■□□□□ 0.18
PRKCSH-212ENST00000591462 IL17AQ16552 155 aa16.16■□□□□ 0.18
PRKCSH-212ENST00000591462 RRAGBQ5VZM2 374 aa16.16■□□□□ 0.18
PRKCSH-212ENST00000591462 PDXDC2PQ6P474 469 aa16.16■□□□□ 0.18
PRKCSH-212ENST00000591462 CTAGE6Q86UF2 777 aa16.16■□□□□ 0.18
PRKCSH-212ENST00000591462 CTAGE4Q8IX94 777 aa16.16■□□□□ 0.18
PRKCSH-212ENST00000591462 RNF41Q9H4P4 317 aaPredicted RBP16.16■□□□□ 0.18
PRKCSH-212ENST00000591462 LRRIQ3A6PVS8 624 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 ADAMTS3O15072 1205 aa16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 PRPF3O43395 683 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 ATP2C1P98194 919 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 AKAP17AQ02040 695 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 TTC38Q5R3I4 469 aa16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 CYP26C1Q6V0L0 522 aa16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 NUP88Q99567 741 aaPredicted RBP16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 QSER1Q2KHR3 1735 aa16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 NUP98P52948 1817 aa16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 MYO1CO00159 1063 aa16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 GYS1P13807 737 aa16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 TCP11X2Q5H9J9 407 aa16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 DZIP3Q86Y13 1208 aaKnown RBP16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 RWDD2AQ9UIY3 292 aa16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 MYO6Q9UM54 1294 aa16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 RTL9Q8NET4 1388 aa16.15■□□□□ 0.18
PRKCSH-212ENST00000591462 CYP2D7A0A087X1C5 515 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 XBP1P17861 261 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 KRT9P35527 623 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 FOXR1Q6PIV2 292 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 TRIM34Q9BYJ4 488 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 TSPYL1Q9H0U9 437 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 KCNJ18B7U540 433 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 TROAPQ12815 778 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 KCNJ12Q14500 433 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 ZNF34Q8IZ26 560 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 ESR2Q92731 530 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 ZSCAN10Q96SZ4 725 aaPredicted RBP16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 LRP2BPQ9P2M1 347 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 MYO1AQ9UBC5 1043 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 ANAPC4Q9UJX5 808 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 TFR2Q9UP52 801 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 MAPK8IP1Q9UQF2 711 aa16.14■□□□□ 0.17
PRKCSH-212ENST00000591462 EIF3JO75822 258 aaKnown RBP16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 BMP15O95972 392 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 CYP7A1P22680 504 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 TUBB4BP68371 445 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 PAK1Q13153 545 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 MAPK8IP2Q13387 824 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 SRLQ86TD4 932 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 IRF2BP1Q8IU81 584 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 FLAD1Q8NFF5 587 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 NELFBQ8WX92 580 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 HDAC6Q9UBN7 1215 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 IQSEC3Q9UPP2 1182 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 GDAQ9Y2T3 454 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 MYH2Q9UKX2 1941 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 PHACTR2O75167 634 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 ZPR1O75312 459 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 VEGFAP15692 232 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 ADRA2BP18089 450 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 PPP2R5BQ15173 497 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 BICDL1Q6ZP65 573 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 ZFP91Q96JP5 570 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 NARFQ9UHQ1 456 aa16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 EPN1Q9Y6I3 576 aaPredicted RBP16.13■□□□□ 0.17
PRKCSH-212ENST00000591462 DUOX1Q9NRD9 1551 aa16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 ENC1O14682 589 aa16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 GTPBP6O43824 516 aaPredicted RBP16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 CAMTA2O94983 1202 aa16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 NDUFA10O95299 355 aa16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 PTGER2P43116 358 aa16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 WDR93Q6P2C0 686 aa16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 TRAPPC11Q7Z392 1133 aa16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 C10orf67Q8IYJ2 551 aa16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 MTFR1LQ9H019 292 aa16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 CWC15Q9P013 229 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 GUCA1BQ9UMX6 200 aa16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 RRP15Q9Y3B9 282 aaKnown RBP16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 CNTNAP5Q8WYK1 1306 aa16.12■□□□□ 0.17
PRKCSH-212ENST00000591462 TTC26A0AVF1 554 aa16.11■□□□□ 0.17
PRKCSH-212ENST00000591462 PRCPP42785 496 aa16.11■□□□□ 0.17
PRKCSH-212ENST00000591462 EVX2Q03828 476 aa16.11■□□□□ 0.17
PRKCSH-212ENST00000591462 UBXN1Q04323 297 aa16.11■□□□□ 0.17
PRKCSH-212ENST00000591462 IFIT1BQ5T764 474 aaKnown RBP16.11■□□□□ 0.17
PRKCSH-212ENST00000591462 SUSD4Q5VX71 490 aa16.11■□□□□ 0.17
PRKCSH-212ENST00000591462 CCDC102AQ96A19 550 aa16.11■□□□□ 0.17
PRKCSH-212ENST00000591462 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms