RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 CSF2RAP15509 400 aa20.89■□□□□ 0.93
RETREG3-210ENST00000590541 CDK8P49336 464 aa20.89■□□□□ 0.93
RETREG3-210ENST00000590541 ADGRE1Q14246 886 aa20.89■□□□□ 0.93
RETREG3-210ENST00000590541 CEP85Q6P2H3 762 aa20.89■□□□□ 0.93
RETREG3-210ENST00000590541 CCDC129Q6ZRS4 1044 aa20.89■□□□□ 0.93
RETREG3-210ENST00000590541 MSL3Q8N5Y2 521 aaKnown RBP20.89■□□□□ 0.93
RETREG3-210ENST00000590541 MROH7Q68CQ1 1323 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 CYP2D7A0A087X1C5 515 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 GOLIM4O00461 696 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 DUSP11O75319 330 aaKnown RBP20.88■□□□□ 0.93
RETREG3-210ENST00000590541 RLBP1P12271 317 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 CST5P28325 142 aaPredicted RBP20.88■□□□□ 0.93
RETREG3-210ENST00000590541 COPB2P35606 906 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 SLFNL1Q499Z3 407 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 FAM83BQ5T0W9 1011 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 C12orf60Q5U649 245 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 MAMDC4Q6UXC1 1216 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 ERC1Q8IUD2 1116 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 ADAMTS19Q8TE59 1207 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 GLT1D1Q96MS3 346 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 IL1RAPL2Q9NP60 686 aa20.88■□□□□ 0.93
RETREG3-210ENST00000590541 ZHX1Q9UKY1 873 aaPredicted RBP20.88■□□□□ 0.93
RETREG3-210ENST00000590541 ADCY6O43306 1168 aa20.87■□□□□ 0.93
RETREG3-210ENST00000590541 ASGR1P07306 291 aa20.87■□□□□ 0.93
RETREG3-210ENST00000590541 ACRP10323 421 aa20.87■□□□□ 0.93
RETREG3-210ENST00000590541 CCDC174Q6PII3 467 aa20.87■□□□□ 0.93
RETREG3-210ENST00000590541 C16orf86Q6ZW13 317 aa20.87■□□□□ 0.93
RETREG3-210ENST00000590541 ZNF365Q70YC5 407 aa20.87■□□□□ 0.93
RETREG3-210ENST00000590541 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.87■□□□□ 0.93
RETREG3-210ENST00000590541 DNAJC2Q99543 621 aaKnown RBP20.87■□□□□ 0.93
RETREG3-210ENST00000590541 KANSL2Q9H9L4 492 aa20.87■□□□□ 0.93
RETREG3-210ENST00000590541 ATP8A2Q9NTI2 1148 aa20.87■□□□□ 0.93
RETREG3-210ENST00000590541 BAZ2AQ9UIF9 1905 aaKnown RBP20.86■□□□□ 0.93
RETREG3-210ENST00000590541 DNAJC25-GNG10A0A024R161 153 aa20.86■□□□□ 0.93
RETREG3-210ENST00000590541 TMEM199Q8N511 208 aa20.86■□□□□ 0.93
RETREG3-210ENST00000590541 PPP1R12CQ9BZL4 782 aa20.86■□□□□ 0.93
RETREG3-210ENST00000590541 GOPCQ9HD26 462 aa20.86■□□□□ 0.93
RETREG3-210ENST00000590541 RIPK3Q9Y572 518 aa20.86■□□□□ 0.93
RETREG3-210ENST00000590541 USP17L12C9JPN9 530 aa20.85■□□□□ 0.93
RETREG3-210ENST00000590541 USP17L21D6R901 530 aa20.85■□□□□ 0.93
RETREG3-210ENST00000590541 ARVCFO00192 962 aa20.85■□□□□ 0.93
RETREG3-210ENST00000590541 MBD4O95243 580 aa20.85■□□□□ 0.93
RETREG3-210ENST00000590541 C6orf222P0C671 652 aaPredicted RBP20.85■□□□□ 0.93
RETREG3-210ENST00000590541 MRPS5P82675 430 aaKnown RBP20.85■□□□□ 0.93
RETREG3-210ENST00000590541 CCDC85BQ15834 202 aaPredicted RBP20.85■□□□□ 0.93
RETREG3-210ENST00000590541 SNRNP48Q6IEG0 339 aaKnown RBP20.85■□□□□ 0.93
RETREG3-210ENST00000590541 PSRC1Q6PGN9 363 aaPredicted RBP20.85■□□□□ 0.93
RETREG3-210ENST00000590541 FAM126BQ8IXS8 530 aa20.85■□□□□ 0.93
RETREG3-210ENST00000590541 PCSK9Q8NBP7 692 aaKnown RBP20.85■□□□□ 0.93
RETREG3-210ENST00000590541 RHPN1Q8TCX5 695 aa20.85■□□□□ 0.93
RETREG3-210ENST00000590541 UHRF1Q96T88 793 aaPredicted RBP20.85■□□□□ 0.93
RETREG3-210ENST00000590541 TEX13BQ9BXU2 312 aa20.85■□□□□ 0.93
RETREG3-210ENST00000590541 CHMP4BQ9H444 224 aaKnown RBP20.85■□□□□ 0.93
RETREG3-210ENST00000590541 CHD9Q3L8U1 2897 aa20.85■□□□□ 0.93
RETREG3-210ENST00000590541 A0A0U1RQG5 324 aaPredicted RBP20.84■□□□□ 0.93
RETREG3-210ENST00000590541 RAD21O60216 631 aa20.84■□□□□ 0.93
RETREG3-210ENST00000590541 ADD2P35612 726 aa20.84■□□□□ 0.93
RETREG3-210ENST00000590541 ACVR2BQ13705 512 aa20.84■□□□□ 0.93
RETREG3-210ENST00000590541 DDX11Q96FC9 970 aa20.84■□□□□ 0.93
RETREG3-210ENST00000590541 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.84■□□□□ 0.93
RETREG3-210ENST00000590541 UPF3AQ9H1J1 476 aaKnown RBP20.84■□□□□ 0.93
RETREG3-210ENST00000590541 CXXC1Q9P0U4 656 aaPredicted RBP20.84■□□□□ 0.93
RETREG3-210ENST00000590541 IGFBP4P22692 258 aa20.83■□□□□ 0.93
RETREG3-210ENST00000590541 GJA9P57773 515 aa20.83■□□□□ 0.93
RETREG3-210ENST00000590541 ZNF467Q7Z7K2 595 aaPredicted RBP20.83■□□□□ 0.93
RETREG3-210ENST00000590541 HERVK_113Q902F9 699 aa20.83■□□□□ 0.93
RETREG3-210ENST00000590541 VTI1AQ96AJ9 217 aa20.83■□□□□ 0.93
RETREG3-210ENST00000590541 FGD4Q96M96 766 aa20.83■□□□□ 0.93
RETREG3-210ENST00000590541 NUP88Q99567 741 aaPredicted RBP20.83■□□□□ 0.93
RETREG3-210ENST00000590541 SLF1Q9BQI6 1058 aa20.83■□□□□ 0.93
RETREG3-210ENST00000590541 NKX2-4Q9H2Z4 354 aa20.83■□□□□ 0.93
RETREG3-210ENST00000590541 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.83■□□□□ 0.93
RETREG3-210ENST00000590541 MSRAQ9UJ68 235 aa20.83■□□□□ 0.93
RETREG3-210ENST00000590541 CTAGE5O15320 804 aa20.82■□□□□ 0.92
RETREG3-210ENST00000590541 CD4P01730 458 aa20.82■□□□□ 0.92
RETREG3-210ENST00000590541 CHGBP05060 677 aa20.82■□□□□ 0.92
RETREG3-210ENST00000590541 PLA2G5P39877 138 aa20.82■□□□□ 0.92
RETREG3-210ENST00000590541 RAB30Q15771 203 aa20.82■□□□□ 0.92
RETREG3-210ENST00000590541 CCDC144BQ3MJ40 725 aa20.82■□□□□ 0.92
RETREG3-210ENST00000590541 IL23AQ9NPF7 189 aa20.82■□□□□ 0.92
RETREG3-210ENST00000590541 RCAN3Q9UKA8 241 aa20.82■□□□□ 0.92
RETREG3-210ENST00000590541 YBX2Q9Y2T7 364 aaKnown RBP20.82■□□□□ 0.92
RETREG3-210ENST00000590541 APBB1O00213 710 aa20.81■□□□□ 0.92
RETREG3-210ENST00000590541 ATP2A1O14983 1001 aa20.81■□□□□ 0.92
RETREG3-210ENST00000590541 CYP2C18P33260 490 aa20.81■□□□□ 0.92
RETREG3-210ENST00000590541 GNASQ5JWF2 1037 aa20.81■□□□□ 0.92
RETREG3-210ENST00000590541 CTR9Q6PD62 1173 aa20.81■□□□□ 0.92
RETREG3-210ENST00000590541 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.81■□□□□ 0.92
RETREG3-210ENST00000590541 PANK1Q8TE04 598 aa20.81■□□□□ 0.92
RETREG3-210ENST00000590541 ABHD16BQ9H3Z7 469 aa20.81■□□□□ 0.92
RETREG3-210ENST00000590541 SPC25Q9HBM1 224 aa20.81■□□□□ 0.92
RETREG3-210ENST00000590541 DDX19BQ9UMR2 479 aa20.81■□□□□ 0.92
RETREG3-210ENST00000590541 GREB1LQ9C091 1923 aaPredicted RBP20.8■□□□□ 0.92
RETREG3-210ENST00000590541 TLR3O15455 904 aaKnown RBP20.8■□□□□ 0.92
RETREG3-210ENST00000590541 HSP90AB4PQ58FF6 505 aa20.8■□□□□ 0.92
RETREG3-210ENST00000590541 AMOTL1Q8IY63 956 aa20.8■□□□□ 0.92
RETREG3-210ENST00000590541 CLASRPQ8N2M8 674 aaKnown RBP20.8■□□□□ 0.92
RETREG3-210ENST00000590541 KATNBL1Q9H079 304 aa20.8■□□□□ 0.92
RETREG3-210ENST00000590541 PAG1Q9NWQ8 432 aa20.8■□□□□ 0.92
RETREG3-210ENST00000590541 GBF1Q92538 1859 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms