RNA–Protein interactions for RNA: ENST00000585894.5

RETREG3-203, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 1 (best) BASIC

Gene RETREG3, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-203ENST00000585894 REPS2Q8NFH8 660 aa14.78□□□□□ -0.04
RETREG3-203ENST00000585894 GTF3C2Q8WUA4 911 aaPredicted RBP14.78□□□□□ -0.04
RETREG3-203ENST00000585894 UBA5Q9GZZ9 404 aa14.78□□□□□ -0.04
RETREG3-203ENST00000585894 MYH6P13533 1939 aa14.78□□□□□ -0.04
RETREG3-203ENST00000585894 TNPO2O14787 897 aaKnown RBP14.78□□□□□ -0.04
RETREG3-203ENST00000585894 FCGRTP55899 365 aa14.78□□□□□ -0.04
RETREG3-203ENST00000585894 EXOSC10Q01780 885 aaKnown RBP14.78□□□□□ -0.04
RETREG3-203ENST00000585894 CPXCR1Q8N123 301 aa14.78□□□□□ -0.04
RETREG3-203ENST00000585894 MOV10L1Q9BXT6 1211 aaKnown RBP14.78□□□□□ -0.04
RETREG3-203ENST00000585894 MCOLN1Q9GZU1 580 aa14.78□□□□□ -0.04
RETREG3-203ENST00000585894 SPATC1LQ9H0A9 340 aa14.78□□□□□ -0.04
RETREG3-203ENST00000585894 PRR12Q9ULL5 1215 aa14.78□□□□□ -0.04
RETREG3-203ENST00000585894 GABRQQ9UN88 632 aa14.78□□□□□ -0.04
RETREG3-203ENST00000585894 RXRAP19793 462 aa14.77□□□□□ -0.05
RETREG3-203ENST00000585894 CASTP20810 708 aaKnown RBP14.77□□□□□ -0.05
RETREG3-203ENST00000585894 PRKCZQ05513 592 aa14.77□□□□□ -0.05
RETREG3-203ENST00000585894 DHX32Q7L7V1 743 aaKnown RBP14.77□□□□□ -0.05
RETREG3-203ENST00000585894 STAG2Q8N3U4 1231 aa14.77□□□□□ -0.05
RETREG3-203ENST00000585894 RAVER2Q9HCJ3 691 aaKnown RBP14.77□□□□□ -0.05
RETREG3-203ENST00000585894 ZNF214Q9UL59 606 aaPredicted RBP14.77□□□□□ -0.05
RETREG3-203ENST00000585894 ZNFX1Q9P2E3 1918 aaKnown RBP14.76□□□□□ -0.05
RETREG3-203ENST00000585894 EPB41L2O43491 1005 aaKnown RBP14.76□□□□□ -0.05
RETREG3-203ENST00000585894 CCDC174Q6PII3 467 aa14.76□□□□□ -0.05
RETREG3-203ENST00000585894 BLOC1S2Q6QNY1 142 aa14.76□□□□□ -0.05
RETREG3-203ENST00000585894 NFXL1Q6ZNB6 911 aa14.76□□□□□ -0.05
RETREG3-203ENST00000585894 FAM160B2Q86V87 743 aa14.76□□□□□ -0.05
RETREG3-203ENST00000585894 ZNF654Q8IZM8 581 aa14.76□□□□□ -0.05
RETREG3-203ENST00000585894 CHURC1Q8WUH1 139 aa14.76□□□□□ -0.05
RETREG3-203ENST00000585894 NUP133Q8WUM0 1156 aa14.76□□□□□ -0.05
RETREG3-203ENST00000585894 TMEM87BQ96K49 555 aa14.76□□□□□ -0.05
RETREG3-203ENST00000585894 UPF3BQ9BZI7 483 aaKnown RBP14.76□□□□□ -0.05
RETREG3-203ENST00000585894 SLC38A10Q9HBR0 1119 aa14.76□□□□□ -0.05
RETREG3-203ENST00000585894 RIPK3Q9Y572 518 aa14.76□□□□□ -0.05
RETREG3-203ENST00000585894 PARP1P09874 1014 aaKnown RBP14.75□□□□□ -0.05
RETREG3-203ENST00000585894 ERCC3P19447 782 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 TROAPQ12815 778 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 SYDE2Q5VT97 1194 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 SNRNP48Q6IEG0 339 aaKnown RBP14.75□□□□□ -0.05
RETREG3-203ENST00000585894 GPR142Q7Z601 462 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 NCAPG2Q86XI2 1143 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 CCAR1Q8IX12 1150 aaKnown RBP14.75□□□□□ -0.05
RETREG3-203ENST00000585894 CCDC144CPQ8IYA2 1237 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 MB21D1Q8N884 522 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 PTCH2Q9Y6C5 1203 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 ZBED4O75132 1171 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 RPS6KB1P23443 525 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 STAT3P40763 770 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 CCNA1P78396 465 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 GRM4Q14833 912 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 BTNL9Q6UXG8 535 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 Q6ZUG5 572 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 CATIPQ7Z7H3 387 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 AGBL1Q96MI9 1066 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 SRRDQ9UH36 339 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 MAD2L2Q9UI95 211 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 BRPF3Q9ULD4 1205 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 PTPN22Q9Y2R2 807 aa14.75□□□□□ -0.05
RETREG3-203ENST00000585894 CTDP1Q9Y5B0 961 aaPredicted RBP14.75□□□□□ -0.05
RETREG3-203ENST00000585894 ZNF536O15090 1300 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 CCDC69A6NI79 296 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 PLA2G6O60733 806 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 MAPK4P31152 587 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 FLT3LGP49771 235 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 SLC35G1Q2M3R5 365 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 ASPRV1Q53RT3 343 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 TNS4Q8IZW8 715 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 COA7Q96BR5 231 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 MTA3Q9BTC8 594 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 CWC22Q9HCG8 908 aaKnown RBP14.74□□□□□ -0.05
RETREG3-203ENST00000585894 VAT1LQ9HCJ6 419 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 HOMER2Q9NSB8 354 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 WDR19Q8NEZ3 1342 aa14.74□□□□□ -0.05
RETREG3-203ENST00000585894 HMGB1P09429 215 aaKnown RBP14.73□□□□□ -0.05
RETREG3-203ENST00000585894 LIFRP42702 1097 aa14.73□□□□□ -0.05
RETREG3-203ENST00000585894 ARHGEF6Q15052 776 aa14.73□□□□□ -0.05
RETREG3-203ENST00000585894 GPATCH4Q5T3I0 446 aaKnown RBP14.73□□□□□ -0.05
RETREG3-203ENST00000585894 PLEKHH3Q7Z736 793 aa14.73□□□□□ -0.05
RETREG3-203ENST00000585894 NBPF11Q86T75 865 aa14.73□□□□□ -0.05
RETREG3-203ENST00000585894 RIOX2Q8IUF8 465 aa14.73□□□□□ -0.05
RETREG3-203ENST00000585894 BRF1Q92994 677 aa14.73□□□□□ -0.05
RETREG3-203ENST00000585894 LARP6Q9BRS8 491 aaKnown RBP14.73□□□□□ -0.05
RETREG3-203ENST00000585894 TEX13BQ9BXU2 312 aa14.73□□□□□ -0.05
RETREG3-203ENST00000585894 ZSWIM6Q9HCJ5 1215 aa14.73□□□□□ -0.05
RETREG3-203ENST00000585894 PLXNA1Q9UIW2 1896 aa14.73□□□□□ -0.05
RETREG3-203ENST00000585894 PALM3A6NDB9 673 aaPredicted RBP14.72□□□□□ -0.05
RETREG3-203ENST00000585894 KLRF2D3W0D1 207 aa14.72□□□□□ -0.05
RETREG3-203ENST00000585894 DHX16O60231 1041 aaKnown RBP14.72□□□□□ -0.05
RETREG3-203ENST00000585894 PSMA5P28066 241 aa14.72□□□□□ -0.05
RETREG3-203ENST00000585894 FGD1P98174 961 aa14.72□□□□□ -0.05
RETREG3-203ENST00000585894 APOBRQ0VD83 1088 aa14.72□□□□□ -0.05
RETREG3-203ENST00000585894 FBXO46Q6PJ61 603 aaPredicted RBP14.72□□□□□ -0.05
RETREG3-203ENST00000585894 RUFY3Q7L099 469 aa14.72□□□□□ -0.05
RETREG3-203ENST00000585894 MICU3Q86XE3 530 aa14.72□□□□□ -0.05
RETREG3-203ENST00000585894 ADGRF4Q8IZF3 695 aa14.72□□□□□ -0.05
RETREG3-203ENST00000585894 RANBP17Q9H2T7 1088 aaKnown RBP14.72□□□□□ -0.05
RETREG3-203ENST00000585894 GJD2Q9UKL4 321 aa14.72□□□□□ -0.05
RETREG3-203ENST00000585894 NAP1L2Q9ULW6 460 aaPredicted RBP14.72□□□□□ -0.05
RETREG3-203ENST00000585894 SLC12A7Q9Y666 1083 aa14.72□□□□□ -0.05
RETREG3-203ENST00000585894 KLF18A0A0U1RQI7 1052 aa14.72□□□□□ -0.05
RETREG3-203ENST00000585894 DDAH1O94760 285 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms