RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 ZNF654Q8IZM8 581 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 FAM43AQ8N2R8 423 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 TMTC2Q8N394 836 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 DCAF4Q8WV16 495 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 PTPN18Q99952 460 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 MYL10Q9BUA6 226 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 PNMA3Q9UL41 463 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 NAP1L2Q9ULW6 460 aaPredicted RBP13.41□□□□□ -0.26
KARS-207ENST00000566560 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 FRMPD2Q68DX3 1309 aaPredicted RBP13.4□□□□□ -0.26
KARS-207ENST00000566560 KLF18A0A0U1RQI7 1052 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 GOLGA8BA8MQT2 603 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 PDHXO00330 501 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 SNHG28P0DPA3 235 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 BMP3P12645 472 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 TM4SF4P48230 202 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 NEK4P51957 841 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 APOBRQ0VD83 1088 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 PPP1R15BQ5SWA1 713 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 OTUD7BQ6GQQ9 843 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 APOA5Q6Q788 366 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 RAB11FIP4Q86YS3 637 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 FBXL16Q8N461 479 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 NUP133Q8WUM0 1156 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 PARK7Q99497 189 aaKnown RBP13.4□□□□□ -0.26
KARS-207ENST00000566560 AGXT2Q9BYV1 514 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 ZCCHC17Q9NP64 241 aaKnown RBP13.4□□□□□ -0.26
KARS-207ENST00000566560 SLC45A1Q9Y2W3 748 aa13.4□□□□□ -0.26
KARS-207ENST00000566560 COL11A1P12107 1806 aaPredicted RBP13.39□□□□□ -0.27
KARS-207ENST00000566560 USP17L15C9J2P7 530 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 USP17L13C9JLJ4 530 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 USP17L11C9JVI0 530 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 USP17L18D6R9N7 530 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 USP17L22D6RA61 530 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 USP17L17D6RBQ6 530 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 USP17L19D6RCP7 530 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 USP17L20D6RJB6 530 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 FLOT1O75955 427 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 PARP1P09874 1014 aaKnown RBP13.39□□□□□ -0.27
KARS-207ENST00000566560 RXRAP19793 462 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 AK2P54819 239 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 ZNF543Q08ER8 600 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 USP17L24Q0WX57 530 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 IKQ13123 557 aaPredicted RBP13.39□□□□□ -0.27
KARS-207ENST00000566560 TOB2Q14106 344 aaPredicted RBP13.39□□□□□ -0.27
KARS-207ENST00000566560 DSG2Q14126 1118 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 GRM4Q14833 912 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 ANKRD1Q15327 319 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 TAF1CQ15572 869 aaPredicted RBP13.39□□□□□ -0.27
KARS-207ENST00000566560 E2F4Q16254 413 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 ASPRV1Q53RT3 343 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 SYNE3Q6ZMZ3 975 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 KCTD1Q719H9 257 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 NOL8Q76FK4 1167 aaKnown RBP13.39□□□□□ -0.27
KARS-207ENST00000566560 CTCFLQ8NI51 663 aaPredicted RBP13.39□□□□□ -0.27
KARS-207ENST00000566560 ASCC2Q9H1I8 757 aaPredicted RBP13.39□□□□□ -0.27
KARS-207ENST00000566560 BRPF3Q9ULD4 1205 aa13.39□□□□□ -0.27
KARS-207ENST00000566560 ZBTB43O43298 467 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 ALDH1A1P00352 501 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 GOLGA8HP0CJ92 632 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 CALM1P0DP23 149 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 CALM2P0DP24 149 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 CALM3P0DP25 149 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 CYP2C8P10632 490 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 OSBPP22059 807 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 HOXA7P31268 230 aaPredicted RBP13.38□□□□□ -0.27
KARS-207ENST00000566560 STAT2P52630 851 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 TROAPQ12815 778 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 GPATCH4Q5T3I0 446 aaKnown RBP13.38□□□□□ -0.27
KARS-207ENST00000566560 CATSPERGQ6ZRH7 1159 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 CCDC144CPQ8IYA2 1237 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 DNAJC5GQ8N7S2 189 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 SMCR8Q8TEV9 937 aaPredicted RBP13.38□□□□□ -0.27
KARS-207ENST00000566560 SLF1Q9BQI6 1058 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 GPCPD1Q9NPB8 672 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 MYH6P13533 1939 aa13.38□□□□□ -0.27
KARS-207ENST00000566560 NID2Q14112 1375 aa13.37□□□□□ -0.27
KARS-207ENST00000566560 SPDYE16A6NNV3 312 aaPredicted RBP13.37□□□□□ -0.27
KARS-207ENST00000566560 GOLGA8AA7E2F4 631 aa13.37□□□□□ -0.27
KARS-207ENST00000566560 TMEM232C9JQI7 657 aa13.37□□□□□ -0.27
KARS-207ENST00000566560 ST18O60284 1047 aa13.37□□□□□ -0.27
KARS-207ENST00000566560 KIF5BP33176 963 aa13.37□□□□□ -0.27
KARS-207ENST00000566560 RCAN1P53805 252 aa13.37□□□□□ -0.27
KARS-207ENST00000566560 MAP2K1Q02750 393 aaPredicted RBP13.37□□□□□ -0.27
KARS-207ENST00000566560 MAMSTRQ6ZN01 415 aa13.37□□□□□ -0.27
KARS-207ENST00000566560 FAM160B2Q86V87 743 aa13.37□□□□□ -0.27
KARS-207ENST00000566560 ALDH8A1Q9H2A2 487 aaPredicted RBP13.37□□□□□ -0.27
KARS-207ENST00000566560 FBXO28Q9NVF7 368 aa13.37□□□□□ -0.27
KARS-207ENST00000566560 FEM1BQ9UK73 627 aa13.37□□□□□ -0.27
KARS-207ENST00000566560 MYPNQ86TC9 1320 aa13.37□□□□□ -0.27
KARS-207ENST00000566560 METAP2P50579 478 aaKnown RBP eCLIP13.36□□□□□ -0.27
KARS-207ENST00000566560 HERVK_113P62684 666 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 CRHR2Q13324 411 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 NBR1Q14596 966 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 RTN1Q16799 776 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 TTBK2Q6IQ55 1244 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 GTF3C2Q8WUA4 911 aaPredicted RBP13.36□□□□□ -0.27
KARS-207ENST00000566560 KIFC2Q96AC6 838 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 ATG4CQ96DT6 458 aa13.36□□□□□ -0.27
KARS-207ENST00000566560 MAP3K14Q99558 947 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms