RNA–Protein interactions for RNA: ENST00000563663.5

SCAMP2-203, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 1,787 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-203ENST00000563663 TROAPQ12815 778 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 CTU1Q7Z7A3 348 aaKnown RBP17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 GPRC5AQ8NFJ5 357 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 NEK1Q96PY6 1258 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 PAGR1Q9BTK6 254 aa17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 CWC22Q9HCG8 908 aaKnown RBP17.25■□□□□ 0.35
SCAMP2-203ENST00000563663 BAZ2BQ9UIF8 2168 aaKnown RBP17.24■□□□□ 0.35
SCAMP2-203ENST00000563663 TMEM232C9JQI7 657 aa17.24■□□□□ 0.35
SCAMP2-203ENST00000563663 MCM5P33992 734 aa17.24■□□□□ 0.35
SCAMP2-203ENST00000563663 PSMC4P43686 418 aa17.24■□□□□ 0.35
SCAMP2-203ENST00000563663 SLC35G1Q2M3R5 365 aa17.24■□□□□ 0.35
SCAMP2-203ENST00000563663 IFIT1BQ5T764 474 aaKnown RBP17.24■□□□□ 0.35
SCAMP2-203ENST00000563663 SLC38A10Q9HBR0 1119 aa17.24■□□□□ 0.35
SCAMP2-203ENST00000563663 FEM1BQ9UK73 627 aa17.24■□□□□ 0.35
SCAMP2-203ENST00000563663 WDR19Q8NEZ3 1342 aa17.24■□□□□ 0.35
SCAMP2-203ENST00000563663 ZNFX1Q9P2E3 1918 aaKnown RBP17.24■□□□□ 0.35
SCAMP2-203ENST00000563663 IFIT3O14879 490 aaKnown RBP17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 HSP90AA1P07900 732 aaKnown RBP17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 CPA1P15085 419 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 STAT2P52630 851 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 MB21D1Q8N884 522 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 PRPF38AQ8NAV1 312 aaKnown RBP17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 TCEANC2Q96MN5 208 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 GBP4Q96PP9 640 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 MOV10L1Q9BXT6 1211 aaKnown RBP17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 LRRC2Q9BYS8 371 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 MTMR7Q9Y216 660 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 ZNF536O15090 1300 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 FRMPD2Q68DX3 1309 aaPredicted RBP17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 ZKSCAN1P17029 563 aaPredicted RBP17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 MCM2P49736 904 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 KRT32Q14532 448 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 TMEM67Q5HYA8 995 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 SPATC1LQ9H0A9 340 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 KAT14Q9H8E8 782 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 EFCC1Q9HA90 598 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 GJD2Q9UKL4 321 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 TRIM17Q9Y577 477 aa17.23■□□□□ 0.35
SCAMP2-203ENST00000563663 ATP2A1O14983 1001 aa17.22■□□□□ 0.35
SCAMP2-203ENST00000563663 ECM2O94769 699 aaPredicted RBP17.22■□□□□ 0.35
SCAMP2-203ENST00000563663 LCTP09848 1927 aa17.22■□□□□ 0.35
SCAMP2-203ENST00000563663 MYH6P13533 1939 aa17.22■□□□□ 0.35
SCAMP2-203ENST00000563663 LIFRP42702 1097 aa17.22■□□□□ 0.35
SCAMP2-203ENST00000563663 DHX32Q7L7V1 743 aaKnown RBP17.22■□□□□ 0.35
SCAMP2-203ENST00000563663 SGMS1Q86VZ5 419 aa17.22■□□□□ 0.35
SCAMP2-203ENST00000563663 TMEM87BQ96K49 555 aa17.22■□□□□ 0.35
SCAMP2-203ENST00000563663 CPVLQ9H3G5 476 aa17.22■□□□□ 0.35
SCAMP2-203ENST00000563663 PRR12Q9ULL5 1215 aa17.22■□□□□ 0.35
SCAMP2-203ENST00000563663 GOLGA8HP0CJ92 632 aa17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 SLC16A2P36021 539 aa17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 WTAPQ15007 396 aa17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 FAM160B2Q86V87 743 aa17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 STAG2Q8N3U4 1231 aa17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 TNPO1Q92973 898 aaKnown RBP17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 KIFC2Q96AC6 838 aa17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 JAKMIP1Q96N16 626 aaKnown RBP17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 AGXT2Q9BYV1 514 aa17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 MCOLN1Q9GZU1 580 aa17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 MAD2L2Q9UI95 211 aa17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 GABRQQ9UN88 632 aa17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 RIPK3Q9Y572 518 aa17.21■□□□□ 0.35
SCAMP2-203ENST00000563663 PALM3A6NDB9 673 aaPredicted RBP17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 FCGRTP55899 365 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 PRKCZQ05513 592 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 CCDC96Q2M329 555 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 SKOR2Q2VWA4 1001 aaPredicted RBP17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 FBXL16Q8N461 479 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 USP6NLQ92738 828 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 RANBP17Q9H2T7 1088 aaKnown RBP17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 GPCPD1Q9NPB8 672 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 SRRDQ9UH36 339 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 PTPN22Q9Y2R2 807 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 GNRH1P01148 92 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 NUCB2P80303 420 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 GRM4Q14833 912 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 SART3Q15020 963 aaKnown RBP17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 GPATCH4Q5T3I0 446 aaKnown RBP17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 GPR142Q7Z601 462 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 SHCBP1Q8NEM2 672 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 ZSWIM6Q9HCJ5 1215 aa17.2■□□□□ 0.34
SCAMP2-203ENST00000563663 TRAK2O60296 914 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 ERCC3P19447 782 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 RPS6KB1P23443 525 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 ASPRV1Q53RT3 343 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 MORN1Q5T089 497 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 SYDE2Q5VT97 1194 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 SAMD1Q6SPF0 538 aaPredicted RBP17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 NBPF11Q86T75 865 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 RIOX2Q8IUF8 465 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 ZNF654Q8IZM8 581 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 CHURC1Q8WUH1 139 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 MYL10Q9BUA6 226 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 BRPF3Q9ULD4 1205 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 PLXNA1Q9UIW2 1896 aa17.19■□□□□ 0.34
SCAMP2-203ENST00000563663 TNPO2O14787 897 aaKnown RBP17.18■□□□□ 0.34
SCAMP2-203ENST00000563663 FMNL1O95466 1100 aaPredicted RBP17.18■□□□□ 0.34
SCAMP2-203ENST00000563663 TAL1P17542 331 aaPredicted RBP17.18■□□□□ 0.34
SCAMP2-203ENST00000563663 MAPK4P31152 587 aa17.18■□□□□ 0.34
SCAMP2-203ENST00000563663 OAZ1P54368 228 aa17.18■□□□□ 0.34
SCAMP2-203ENST00000563663 SNAP25P60880 206 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms