RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 TSPY3P0CV98 308 aa24.41■■□□□ 1.5
TSPAN3-206ENST00000559373 TSPY8P0CW00 308 aa24.41■■□□□ 1.5
TSPAN3-206ENST00000559373 TFAP4Q01664 338 aa24.41■■□□□ 1.5
TSPAN3-206ENST00000559373 ZNF792Q3KQV3 632 aa24.41■■□□□ 1.5
TSPAN3-206ENST00000559373 ARRDC4Q8NCT1 418 aa24.41■■□□□ 1.5
TSPAN3-206ENST00000559373 ZBTB47Q9UFB7 747 aaPredicted RBP24.41■■□□□ 1.5
TSPAN3-206ENST00000559373 KBTBD13C9JR72 458 aa24.4■■□□□ 1.5
TSPAN3-206ENST00000559373 ADCYAP1R1P41586 468 aa24.4■■□□□ 1.5
TSPAN3-206ENST00000559373 VPS53Q5VIR6 699 aa24.4■■□□□ 1.5
TSPAN3-206ENST00000559373 TDHQ8IZJ6 230 aa24.4■■□□□ 1.5
TSPAN3-206ENST00000559373 PRPF38AQ8NAV1 312 aaKnown RBP24.4■■□□□ 1.5
TSPAN3-206ENST00000559373 TINF2Q9BSI4 451 aa24.4■■□□□ 1.5
TSPAN3-206ENST00000559373 TTLL1O95922 423 aa24.39■■□□□ 1.49
TSPAN3-206ENST00000559373 PGK1P00558 417 aa24.39■■□□□ 1.49
TSPAN3-206ENST00000559373 PDE4BQ07343 736 aa24.39■■□□□ 1.49
TSPAN3-206ENST00000559373 LRRC41Q15345 812 aa24.39■■□□□ 1.49
TSPAN3-206ENST00000559373 RASGRP2Q7LDG7 609 aa24.39■■□□□ 1.49
TSPAN3-206ENST00000559373 TEX13BQ9BXU2 312 aa24.39■■□□□ 1.49
TSPAN3-206ENST00000559373 ZNF287Q9HBT7 754 aa24.39■■□□□ 1.49
TSPAN3-206ENST00000559373 MTMR7Q9Y216 660 aa24.39■■□□□ 1.49
TSPAN3-206ENST00000559373 CTDP1Q9Y5B0 961 aaPredicted RBP24.39■■□□□ 1.49
TSPAN3-206ENST00000559373 TACC3Q9Y6A5 838 aa24.39■■□□□ 1.49
TSPAN3-206ENST00000559373 NMT2O60551 498 aa24.38■■□□□ 1.49
TSPAN3-206ENST00000559373 ZBED4O75132 1171 aa24.38■■□□□ 1.49
TSPAN3-206ENST00000559373 SLFN13Q68D06 897 aa24.38■■□□□ 1.49
TSPAN3-206ENST00000559373 SLC39A5Q6ZMH5 540 aa24.38■■□□□ 1.49
TSPAN3-206ENST00000559373 Q7L0L9 218 aa24.38■■□□□ 1.49
TSPAN3-206ENST00000559373 NEDD1Q8NHV4 660 aa24.38■■□□□ 1.49
TSPAN3-206ENST00000559373 MKL1Q969V6 931 aa24.38■■□□□ 1.49
TSPAN3-206ENST00000559373 LCTP09848 1927 aa24.37■■□□□ 1.49
TSPAN3-206ENST00000559373 DDX11Q96FC9 970 aa24.37■■□□□ 1.49
TSPAN3-206ENST00000559373 XPNPEP3Q9NQH7 507 aa24.37■■□□□ 1.49
TSPAN3-206ENST00000559373 PRDM5Q9NQX1 630 aaPredicted RBP24.37■■□□□ 1.49
TSPAN3-206ENST00000559373 HOMER2Q9NSB8 354 aa24.37■■□□□ 1.49
TSPAN3-206ENST00000559373 SLC3A2P08195 630 aaKnown RBP24.36■■□□□ 1.49
TSPAN3-206ENST00000559373 PDE1AP54750 535 aa24.36■■□□□ 1.49
TSPAN3-206ENST00000559373 SNAP25P60880 206 aa24.36■■□□□ 1.49
TSPAN3-206ENST00000559373 TRIM60Q495X7 471 aa24.36■■□□□ 1.49
TSPAN3-206ENST00000559373 B4GALNT3Q6L9W6 998 aa24.36■■□□□ 1.49
TSPAN3-206ENST00000559373 FAM227BQ96M60 508 aa24.36■■□□□ 1.49
TSPAN3-206ENST00000559373 TMEM232C9JQI7 657 aa24.35■■□□□ 1.49
TSPAN3-206ENST00000559373 ZNF865P0CJ78 1059 aaPredicted RBP24.35■■□□□ 1.49
TSPAN3-206ENST00000559373 RARBP10826 455 aa24.35■■□□□ 1.49
TSPAN3-206ENST00000559373 BMP3P12645 472 aa24.35■■□□□ 1.49
TSPAN3-206ENST00000559373 MCCP23508 829 aa24.35■■□□□ 1.49
TSPAN3-206ENST00000559373 GMCL1P1Q8NEA9 526 aa24.35■■□□□ 1.49
TSPAN3-206ENST00000559373 LBHD1Q9BQE6 289 aaPredicted RBP24.35■■□□□ 1.49
TSPAN3-206ENST00000559373 LNPKQ9C0E8 428 aa24.35■■□□□ 1.49
TSPAN3-206ENST00000559373 SLC38A10Q9HBR0 1119 aa24.35■■□□□ 1.49
TSPAN3-206ENST00000559373 FEM1BQ9UK73 627 aa24.35■■□□□ 1.49
TSPAN3-206ENST00000559373 DIS3Q9Y2L1 958 aaKnown RBP24.35■■□□□ 1.49
TSPAN3-206ENST00000559373 PLIN4Q96Q06 1357 aa24.34■■□□□ 1.49
TSPAN3-206ENST00000559373 TSPY2A6NKD2 308 aa24.34■■□□□ 1.49
TSPAN3-206ENST00000559373 IRX5P78411 483 aaPredicted RBP24.34■■□□□ 1.49
TSPAN3-206ENST00000559373 IKQ13123 557 aaPredicted RBP24.34■■□□□ 1.49
TSPAN3-206ENST00000559373 SH3RF1Q7Z6J0 888 aa24.34■■□□□ 1.49
TSPAN3-206ENST00000559373 IL17RBQ9NRM6 502 aa24.34■■□□□ 1.49
TSPAN3-206ENST00000559373 STX8Q9UNK0 236 aa24.34■■□□□ 1.49
TSPAN3-206ENST00000559373 A0A0D9SFI3 127 aa24.33■■□□□ 1.49
TSPAN3-206ENST00000559373 RANBP6O60518 1105 aaKnown RBP24.33■■□□□ 1.49
TSPAN3-206ENST00000559373 SNAI1O95863 264 aaPredicted RBP24.33■■□□□ 1.49
TSPAN3-206ENST00000559373 COPB2P35606 906 aa24.33■■□□□ 1.49
TSPAN3-206ENST00000559373 KCTD1Q719H9 257 aa24.33■■□□□ 1.49
TSPAN3-206ENST00000559373 EVI5LQ96CN4 794 aa24.33■■□□□ 1.49
TSPAN3-206ENST00000559373 PRKAG2Q9UGJ0 569 aa24.33■■□□□ 1.49
TSPAN3-206ENST00000559373 ZHX1Q9UKY1 873 aaPredicted RBP24.33■■□□□ 1.49
TSPAN3-206ENST00000559373 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.33■■□□□ 1.49
TSPAN3-206ENST00000559373 MYH6P13533 1939 aa24.32■■□□□ 1.48
TSPAN3-206ENST00000559373 DNAJC25-GNG10A0A024R161 153 aa24.32■■□□□ 1.48
TSPAN3-206ENST00000559373 HDAC1Q13547 482 aaPredicted RBP24.32■■□□□ 1.48
TSPAN3-206ENST00000559373 RRP12Q5JTH9 1297 aaKnown RBP24.32■■□□□ 1.48
TSPAN3-206ENST00000559373 ANKRD35Q8N283 1001 aa24.32■■□□□ 1.48
TSPAN3-206ENST00000559373 DEFB123Q8N688 67 aa24.32■■□□□ 1.48
TSPAN3-206ENST00000559373 AGBL1Q96MI9 1066 aa24.32■■□□□ 1.48
TSPAN3-206ENST00000559373 CNPY2Q9Y2B0 182 aa24.32■■□□□ 1.48
TSPAN3-206ENST00000559373 AKR1A1P14550 325 aa24.31■■□□□ 1.48
TSPAN3-206ENST00000559373 LRIT3Q3SXY7 679 aa24.31■■□□□ 1.48
TSPAN3-206ENST00000559373 FGD4Q96M96 766 aa24.31■■□□□ 1.48
TSPAN3-206ENST00000559373 TOMM22Q9NS69 142 aa24.31■■□□□ 1.48
TSPAN3-206ENST00000559373 DDX49Q9Y6V7 483 aaKnown RBP24.31■■□□□ 1.48
TSPAN3-206ENST00000559373 TRIM6-TRIM34B2RNG4 842 aa24.3■■□□□ 1.48
TSPAN3-206ENST00000559373 ATP2A1O14983 1001 aa24.3■■□□□ 1.48
TSPAN3-206ENST00000559373 SLC1A4P43007 532 aa24.3■■□□□ 1.48
TSPAN3-206ENST00000559373 STAT2P52630 851 aa24.3■■□□□ 1.48
TSPAN3-206ENST00000559373 CNTN2Q02246 1040 aa24.3■■□□□ 1.48
TSPAN3-206ENST00000559373 CCDC174Q6PII3 467 aa24.3■■□□□ 1.48
TSPAN3-206ENST00000559373 BADQ92934 168 aa24.3■■□□□ 1.48
TSPAN3-206ENST00000559373 RILPL2Q969X0 211 aa24.3■■□□□ 1.48
TSPAN3-206ENST00000559373 LRRC37A2A6NM11 1700 aa24.3■■□□□ 1.48
TSPAN3-206ENST00000559373 ADCY6O43306 1168 aa24.29■■□□□ 1.48
TSPAN3-206ENST00000559373 HAND2P61296 217 aa24.29■■□□□ 1.48
TSPAN3-206ENST00000559373 TLE2Q04725 743 aa24.29■■□□□ 1.48
TSPAN3-206ENST00000559373 NMIQ13287 307 aaPredicted RBP24.29■■□□□ 1.48
TSPAN3-206ENST00000559373 RNF180Q86T96 592 aa24.29■■□□□ 1.48
TSPAN3-206ENST00000559373 ZNF589Q86UQ0 364 aaPredicted RBP24.29■■□□□ 1.48
TSPAN3-206ENST00000559373 PDLIM7Q9NR12 457 aa24.29■■□□□ 1.48
TSPAN3-206ENST00000559373 NRBP1Q9UHY1 535 aa24.29■■□□□ 1.48
TSPAN3-206ENST00000559373 PHF24Q9UPV7 400 aa24.29■■□□□ 1.48
TSPAN3-206ENST00000559373 ZNF536O15090 1300 aa24.29■■□□□ 1.48
TSPAN3-206ENST00000559373 A0A1W2PQ45 241 aaPredicted RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms