RNA–Protein interactions for RNA: ENST00000552130.6

VPS29-210, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-210ENST00000552130 RNASEH2AO75792 299 aaKnown RBP7.76□□□□□ -1.17
VPS29-210ENST00000552130 ECEL1O95672 775 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 F2P00734 622 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 EIF4A3P38919 411 aaKnown RBP7.76□□□□□ -1.17
VPS29-210ENST00000552130 GRIA4P48058 902 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 PURAQ00577 322 aaKnown RBP7.76□□□□□ -1.17
VPS29-210ENST00000552130 PIN1Q13526 163 aaPredicted RBP7.76□□□□□ -1.17
VPS29-210ENST00000552130 FBLN7Q53RD9 439 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 USPL1Q5W0Q7 1092 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 PCNX4Q63HM2 1172 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 WWC2Q6AWC2 1192 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 DYMQ7RTS9 669 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 ATG4DQ86TL0 474 aaPredicted RBP7.76□□□□□ -1.17
VPS29-210ENST00000552130 DGKHQ86XP1 1220 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 TCEAL8Q8IYN2 117 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 CPXCR1Q8N123 301 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 UBR7Q8N806 425 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 GLIS3Q8NEA6 775 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 NINJ1Q92982 152 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 SHDQ96IW2 340 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 NOC4LQ9BVI4 516 aaKnown RBP7.76□□□□□ -1.17
VPS29-210ENST00000552130 KDM2BQ8NHM5 1336 aa7.76□□□□□ -1.17
VPS29-210ENST00000552130 A0A087X0B3 334 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 TMEM238LA0A1B0GVL6 79 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 A0A1W2PP55 124 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 MINDY4BA8MYZ0 360 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 IRS4O14654 1257 aaPredicted RBP7.75□□□□□ -1.17
VPS29-210ENST00000552130 GFOD2Q3B7J2 385 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 FAM102BQ5T8I3 360 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 ANO1Q5XXA6 986 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 NXNQ6DKJ4 435 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 RELL1Q8IUW5 271 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 ZNF296Q8WUU4 475 aaPredicted RBP7.75□□□□□ -1.17
VPS29-210ENST00000552130 MISP3Q96FF7 219 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 NT5C1AQ9BXI3 368 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 ZFYVE1Q9HBF4 777 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 LUZP4Q9P127 313 aa7.75□□□□□ -1.17
VPS29-210ENST00000552130 NOB1Q9ULX3 412 aaKnown RBP7.75□□□□□ -1.17
VPS29-210ENST00000552130 BIN1O00499 593 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 DIAPH1O60610 1272 aaKnown RBP7.74□□□□□ -1.17
VPS29-210ENST00000552130 PDE8AO60658 829 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 B3GALT4O96024 378 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 FUT4P22083 530 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 ASPAP45381 313 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 PPM1FP49593 454 aaPredicted RBP7.74□□□□□ -1.17
VPS29-210ENST00000552130 APOBRQ0VD83 1088 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 PLCL1Q15111 1095 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 SPRED3Q2MJR0 410 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 AKAP4Q5JQC9 854 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 CC2D1AQ6P1N0 951 aaPredicted RBP7.74□□□□□ -1.17
VPS29-210ENST00000552130 GALNT12Q8IXK2 581 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 ANKRD42Q8N9B4 389 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 NGDNQ8NEJ9 315 aaKnown RBP7.74□□□□□ -1.17
VPS29-210ENST00000552130 EPS8L3Q8TE67 593 aaKnown RBP7.74□□□□□ -1.17
VPS29-210ENST00000552130 SMAD5Q99717 465 aaKnown RBP7.74□□□□□ -1.17
VPS29-210ENST00000552130 SRCIN1Q9C0H9 1055 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 NGRNQ9NPE2 291 aaKnown RBP7.74□□□□□ -1.17
VPS29-210ENST00000552130 ACTR10Q9NZ32 417 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 PFDN2Q9UHV9 154 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 NOL7Q9UMY1 257 aaKnown RBP7.74□□□□□ -1.17
VPS29-210ENST00000552130 GTF2A1LQ9UNN4 478 aa7.74□□□□□ -1.17
VPS29-210ENST00000552130 E2F8A0AVK6 867 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 F6X3S4 739 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 NBPF7P0C2Y1 421 aaPredicted RBP7.73□□□□□ -1.17
VPS29-210ENST00000552130 SRGNP10124 158 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 GBP2P32456 591 aaPredicted RBP7.73□□□□□ -1.17
VPS29-210ENST00000552130 GEMIN4P57678 1058 aaKnown RBP7.73□□□□□ -1.17
VPS29-210ENST00000552130 ZNF124Q15973 351 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 SLC4A8Q2Y0W8 1093 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 IL31Q6EBC2 164 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 CCDC81Q6ZN84 652 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 RNF180Q86T96 592 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 MAGEB6Q8N7X4 407 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 FAM169BQ8N8A8 192 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 ENAHQ8N8S7 591 aaPredicted RBP7.73□□□□□ -1.17
VPS29-210ENST00000552130 CCDC74AQ96AQ1 378 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 RTFDC1Q9BY42 306 aaPredicted RBP7.73□□□□□ -1.17
VPS29-210ENST00000552130 IFT122Q9HBG6 1241 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 AASDHPPTQ9NRN7 309 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 USP25Q9UHP3 1055 aa7.73□□□□□ -1.17
VPS29-210ENST00000552130 PRRT4C9JH25 899 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 AOC2O75106 756 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 RAPGEF3O95398 923 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 POLR3DP05423 398 aaPredicted RBP7.72□□□□□ -1.17
VPS29-210ENST00000552130 TRIM27P14373 513 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 HTR3AP46098 478 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 NEK3P51956 506 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 BNIP3Q12983 259 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 PICALMQ13492 652 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 SEPT6Q14141 434 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 AFAP1L2Q8N4X5 818 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 HOOK2Q96ED9 719 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 TMEM74Q96NL1 305 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 WDR18Q9BV38 432 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 SELENOOQ9BVL4 669 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 LIN7BQ9HAP6 207 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 PPP1R9AQ9ULJ8 1098 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 AP4E1Q9UPM8 1137 aa7.72□□□□□ -1.17
VPS29-210ENST00000552130 CTDP1Q9Y5B0 961 aaPredicted RBP7.72□□□□□ -1.17
VPS29-210ENST00000552130 PRPF3O43395 683 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms