RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ATP2B2Q01814 1243 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 USP17L24Q0WX57 530 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 SLC9C2Q5TAH2 1124 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 TSHZ3Q63HK5 1081 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 SH3RF1Q7Z6J0 888 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 APBA2Q99767 749 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 MOV10L1Q9BXT6 1211 aaKnown RBP8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 BOLA2Q9H3K6 86 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 FBXO28Q9NVF7 368 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 ATP11BQ9Y2G3 1177 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 COG6Q9Y2V7 657 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 CDH23Q9H251 3354 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 TCRBV5S4A2TA0A5A2 114 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 PGK2P07205 417 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 ADORA2AP29274 412 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 SSTR3P32745 418 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 C9orf50Q5SZB4 431 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 C20orf194Q5TEA3 1177 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 TDHQ8IZJ6 230 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 RHPN1Q8TCX5 695 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 SOCS4Q8WXH5 440 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 ATG4CQ96DT6 458 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 NUP88Q99567 741 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 KIAA1683Q9H0B3 1180 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 PRDM5Q9NQX1 630 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 FAM217BQ9NTX9 383 aaPredicted RBP8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 MTMR10Q9NXD2 777 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 RABGAP1Q9Y3P9 1069 aa8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 DDX49Q9Y6V7 483 aaKnown RBP8.3□□□□□ -1.08
PRPF40B-214ENST00000551320 TK2O00142 265 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 MBD4O95243 580 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 MAP4K4O95819 1239 aaPredicted RBP8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 XRCC5P13010 732 aaKnown RBP8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 ERCC3P19447 782 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 PTGS1P23219 599 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 ITGB8P26012 769 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 RTP1P59025 263 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 MAP3K12Q12852 859 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 ADGRD1Q6QNK2 874 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 NCAPG2Q86XI2 1143 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 ANKLE1Q8NAG6 615 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 DDRGK1Q96HY6 314 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 ZNF512BQ96KM6 892 aaPredicted RBP8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 GUCD1Q96NT3 240 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 TBC1D2Q9BYX2 928 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 TMEM134Q9H6X4 195 aa8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 DCP1AQ9NPI6 582 aaPredicted RBP8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 DAXXQ9UER7 740 aaPredicted RBP8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 DDX20Q9UHI6 824 aaKnown RBP8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 SPTBN5Q9NRC6 3674 aaKnown RBP8.29□□□□□ -1.08
PRPF40B-214ENST00000551320 SLC15A5A6NIM6 579 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 BMP8BP34820 402 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 ADCYAP1R1P41586 468 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 EPHB4P54760 987 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 GABPAQ06546 454 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 GRB14Q14449 540 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 SHHQ15465 462 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 TRIM60Q495X7 471 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 FAM47AQ5JRC9 791 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 MFSD14CQ5VZR4 134 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 DPP9Q86TI2 863 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 TTC6Q86TZ1 520 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 C12orf42Q96LP6 360 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 BAZ2AQ9UIF9 1905 aaKnown RBP8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 NAV1Q8NEY1 1877 aa8.28□□□□□ -1.08
PRPF40B-214ENST00000551320 SMCHD1A6NHR9 2005 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 FRMPD3Q5JV73 1810 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 TRIM43BA6NCK2 446 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 USP17L12C9JPN9 530 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 BHMG1C9JSJ3 638 aaPredicted RBP8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 USP17L21D6R901 530 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 FLOT1O75955 427 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 PGK1P00558 417 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 CYBAP13498 195 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 TMEM132BQ14DG7 1078 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 LBX2Q6XYB7 198 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 BADQ92934 168 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 TRIM43Q96BQ3 446 aaPredicted RBP8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 CRNKL1Q9BZJ0 848 aaKnown RBP8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 SPATC1LQ9H0A9 340 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 PUS7LQ9H0K6 701 aaKnown RBP8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 EHD4Q9H223 541 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 IVNS1ABPQ9Y6Y0 642 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 CHD9Q3L8U1 2897 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 RLFQ13129 1914 aa8.27□□□□□ -1.09
PRPF40B-214ENST00000551320 IFIT2P09913 472 aaKnown RBP8.26□□□□□ -1.09
PRPF40B-214ENST00000551320 EEF2P13639 858 aaKnown RBP8.26□□□□□ -1.09
PRPF40B-214ENST00000551320 CDK8P49336 464 aa8.26□□□□□ -1.09
PRPF40B-214ENST00000551320 USP14P54578 494 aa8.26□□□□□ -1.09
PRPF40B-214ENST00000551320 CCNA1P78396 465 aa8.26□□□□□ -1.09
PRPF40B-214ENST00000551320 COG2Q14746 738 aa8.26□□□□□ -1.09
PRPF40B-214ENST00000551320 LRIT3Q3SXY7 679 aa8.26□□□□□ -1.09
PRPF40B-214ENST00000551320 FAM83BQ5T0W9 1011 aa8.26□□□□□ -1.09
PRPF40B-214ENST00000551320 SLC39A5Q6ZMH5 540 aa8.26□□□□□ -1.09
PRPF40B-214ENST00000551320 RASGRP2Q7LDG7 609 aa8.26□□□□□ -1.09
PRPF40B-214ENST00000551320 PAG1Q9NWQ8 432 aa8.26□□□□□ -1.09
PRPF40B-214ENST00000551320 A0A1W2PPC1 479 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 MYADML2A6NDP7 307 aa8.25□□□□□ -1.09
PRPF40B-214ENST00000551320 PRDM1O75626 825 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms