RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 STK38Q15208 465 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 WWC2Q6AWC2 1192 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 TTBK2Q6IQ55 1244 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 BTNL9Q6UXG8 535 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 RASGRP2Q7LDG7 609 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 PNMA8AQ86V59 439 aaPredicted RBP15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 HOMER1Q86YM7 354 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 SCYL3Q8IZE3 742 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 DAGLBQ8NCG7 672 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 ACER1Q8TDN7 264 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 CHURC1Q8WUH1 139 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 MTMR8Q96EF0 704 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 FEZ1Q99689 392 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 CPVLQ9H3G5 476 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 JMJD4Q9H9V9 463 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 C6orf50Q9HD87 102 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 PCDHA4Q9UN74 947 aa15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 BAZ2BQ9UIF8 2168 aaKnown RBP15.73■□□□□ 0.11
CALCOCO1-214ENST00000549613 ESYT2A0FGR8 921 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 STXBP3O00186 592 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 ZBTB5O15062 677 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 PLA2G6O60733 806 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 NF2P35240 595 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 ECE1P42892 770 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 NASPP49321 788 aaPredicted RBP15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 NAPAP54920 295 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 HTRA3P83110 453 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 SF3A1Q15459 793 aaKnown RBP15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 ANO1Q5XXA6 986 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 PPP1R18Q6NYC8 613 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 BLIDQ8IZY5 108 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 BICD2Q8TD16 824 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 KCNG4Q8TDN1 519 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 GPKOWQ92917 476 aaPredicted RBP eCLIP15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 WDR18Q9BV38 432 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 PICK1Q9NRD5 415 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 MYH15Q9Y2K3 1946 aa15.72■□□□□ 0.11
CALCOCO1-214ENST00000549613 TMEM232C9JQI7 657 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 PPP1R12BO60237 982 aaPredicted RBP15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 GADD45BO75293 160 aaPredicted RBP15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 INPP5BP32019 993 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 SLC16A2P36021 539 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 TRAPPC10P48553 1259 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 USP14P54578 494 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 CEBPZQ03701 1054 aaKnown RBP15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 IKQ13123 557 aaPredicted RBP15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 SYDE2Q5VT97 1194 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 PRAMEF18Q5VWM3 479 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 KRT26Q7Z3Y9 468 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 FAM160B2Q86V87 743 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 OXER1Q8TDS5 423 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 LPAR1Q92633 364 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 SYAP1Q96A49 352 aaPredicted RBP15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 SHISA4Q96DD7 197 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 WRNIP1Q96S55 665 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 KIAA1683Q9H0B3 1180 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 ZMYND12Q9H0C1 365 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 GLT8D2Q9H1C3 349 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 TAF1DQ9H5J8 278 aaPredicted RBP15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 CEP131Q9UPN4 1083 aa15.71■□□□□ 0.11
CALCOCO1-214ENST00000549613 SCN4AP35499 1836 aa15.71■□□□□ 0.1
CALCOCO1-214ENST00000549613 POLR2AP24928 1970 aaKnown RBP15.7■□□□□ 0.1
CALCOCO1-214ENST00000549613 SMCO2A6NFE2 343 aa15.7■□□□□ 0.1
CALCOCO1-214ENST00000549613 USP17L10C9JJH3 530 aa15.7■□□□□ 0.1
CALCOCO1-214ENST00000549613 BMP15O95972 392 aa15.7■□□□□ 0.1
CALCOCO1-214ENST00000549613 VEGFAP15692 232 aaPredicted RBP15.7■□□□□ 0.1
CALCOCO1-214ENST00000549613 NR5A1Q13285 461 aa15.7■□□□□ 0.1
CALCOCO1-214ENST00000549613 SLC39A14Q15043 492 aa15.7■□□□□ 0.1
CALCOCO1-214ENST00000549613 NOL9Q5SY16 702 aaKnown RBP15.7■□□□□ 0.1
CALCOCO1-214ENST00000549613 LINC00301Q8NCQ3 95 aa15.7■□□□□ 0.1
CALCOCO1-214ENST00000549613 FEM1BQ9UK73 627 aa15.7■□□□□ 0.1
CALCOCO1-214ENST00000549613 WDR90Q96KV7 1748 aa15.69■□□□□ 0.1
CALCOCO1-214ENST00000549613 SPTLC2O15270 562 aa15.69■□□□□ 0.1
CALCOCO1-214ENST00000549613 USP2O75604 605 aaPredicted RBP15.69■□□□□ 0.1
CALCOCO1-214ENST00000549613 STAT2P52630 851 aa15.69■□□□□ 0.1
CALCOCO1-214ENST00000549613 MAP3K9P80192 1104 aa15.69■□□□□ 0.1
CALCOCO1-214ENST00000549613 NPY5RQ15761 445 aa15.69■□□□□ 0.1
CALCOCO1-214ENST00000549613 GPT2Q8TD30 523 aa15.69■□□□□ 0.1
CALCOCO1-214ENST00000549613 TNFRSF25Q93038 417 aa15.69■□□□□ 0.1
CALCOCO1-214ENST00000549613 NUP88Q99567 741 aaPredicted RBP15.69■□□□□ 0.1
CALCOCO1-214ENST00000549613 CLIC4Q9Y696 253 aa15.69■□□□□ 0.1
CALCOCO1-214ENST00000549613 ATAD5Q96QE3 1844 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 CCDC194A0A1B0GVG4 234 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 TRIM75PA6NK02 468 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 C19orf81C9J6K1 198 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 WDR46O15213 610 aaKnown RBP15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 PPP6R2O75170 966 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 PTPRAP18433 802 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 ME1P48163 572 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 IREB2P48200 963 aaKnown RBP15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 MRPL12P52815 198 aaKnown RBP15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 CDC37Q16543 378 aaPredicted RBP15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 FAM83BQ5T0W9 1011 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 TYW1BQ6NUM6 668 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 KRT25Q7Z3Z0 450 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 TEX2Q8IWB9 1127 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 SPICE1Q8N0Z3 855 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 AMNQ9BXJ7 453 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 PRR12Q9ULL5 1215 aa15.68■□□□□ 0.1
CALCOCO1-214ENST00000549613 ADM5C9JUS6 153 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms