RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 F5H6K3 240 aa19.58■□□□□ 0.72
UBC-208ENST00000540700 TOP1P11387 765 aaKnown RBP19.58■□□□□ 0.72
UBC-208ENST00000540700 SYN1P17600 705 aa19.58■□□□□ 0.72
UBC-208ENST00000540700 VCAM1P19320 739 aa19.58■□□□□ 0.72
UBC-208ENST00000540700 MNX1P50219 401 aaPredicted RBP19.58■□□□□ 0.72
UBC-208ENST00000540700 KLRC3Q07444 240 aa19.58■□□□□ 0.72
UBC-208ENST00000540700 TMEM67Q5HYA8 995 aa19.58■□□□□ 0.72
UBC-208ENST00000540700 RUFY3Q7L099 469 aa19.58■□□□□ 0.72
UBC-208ENST00000540700 TTC14Q96N46 770 aa19.58■□□□□ 0.72
UBC-208ENST00000540700 SLC45A1Q9Y2W3 748 aa19.58■□□□□ 0.72
UBC-208ENST00000540700 WDR19Q8NEZ3 1342 aa19.57■□□□□ 0.72
UBC-208ENST00000540700 C19orf81C9J6K1 198 aa19.57■□□□□ 0.72
UBC-208ENST00000540700 PSMA5P28066 241 aa19.57■□□□□ 0.72
UBC-208ENST00000540700 WTAPQ15007 396 aa19.57■□□□□ 0.72
UBC-208ENST00000540700 IFIT1BQ5T764 474 aaKnown RBP19.57■□□□□ 0.72
UBC-208ENST00000540700 Q6ZUG5 572 aa19.57■□□□□ 0.72
UBC-208ENST00000540700 GMCL1P1Q8NEA9 526 aa19.57■□□□□ 0.72
UBC-208ENST00000540700 TMEM87BQ96K49 555 aa19.57■□□□□ 0.72
UBC-208ENST00000540700 MTMR7Q9Y216 660 aa19.57■□□□□ 0.72
UBC-208ENST00000540700 MGAMO43451 1857 aa19.56■□□□□ 0.72
UBC-208ENST00000540700 HMGB1P09429 215 aaKnown RBP19.56■□□□□ 0.72
UBC-208ENST00000540700 CAPN2P17655 700 aa19.56■□□□□ 0.72
UBC-208ENST00000540700 USP14P54578 494 aa19.56■□□□□ 0.72
UBC-208ENST00000540700 TOB2Q14106 344 aaPredicted RBP19.56■□□□□ 0.72
UBC-208ENST00000540700 SLFN13Q68D06 897 aa19.56■□□□□ 0.72
UBC-208ENST00000540700 PROCA1Q8NCQ7 364 aaPredicted RBP19.56■□□□□ 0.72
UBC-208ENST00000540700 PNMA1Q8ND90 353 aa19.56■□□□□ 0.72
UBC-208ENST00000540700 MTA3Q9BTC8 594 aa19.56■□□□□ 0.72
UBC-208ENST00000540700 AGXT2Q9BYV1 514 aa19.56■□□□□ 0.72
UBC-208ENST00000540700 SH2D4AQ9H788 454 aa19.56■□□□□ 0.72
UBC-208ENST00000540700 SYNPO2Q9UMS6 1093 aa19.56■□□□□ 0.72
UBC-208ENST00000540700 AGTPBP1Q9UPW5 1226 aa19.56■□□□□ 0.72
UBC-208ENST00000540700 SNHG28P0DPA3 235 aa19.55■□□□□ 0.72
UBC-208ENST00000540700 PDHBP11177 359 aa19.55■□□□□ 0.72
UBC-208ENST00000540700 BMP8BP34820 402 aa19.55■□□□□ 0.72
UBC-208ENST00000540700 CCDC178Q5BJE1 867 aa19.55■□□□□ 0.72
UBC-208ENST00000540700 POTEEQ6S8J3 1075 aa19.55■□□□□ 0.72
UBC-208ENST00000540700 RAB11FIP4Q86YS3 637 aa19.55■□□□□ 0.72
UBC-208ENST00000540700 LARP6Q9BRS8 491 aaKnown RBP19.55■□□□□ 0.72
UBC-208ENST00000540700 MYL10Q9BUA6 226 aa19.55■□□□□ 0.72
UBC-208ENST00000540700 TMOD4Q9NZQ9 345 aa19.55■□□□□ 0.72
UBC-208ENST00000540700 BRPF3Q9ULD4 1205 aa19.55■□□□□ 0.72
UBC-208ENST00000540700 CYP46A1Q9Y6A2 500 aa19.55■□□□□ 0.72
UBC-208ENST00000540700 UNC80Q8N2C7 3258 aa19.54■□□□□ 0.72
UBC-208ENST00000540700 RAD21O60216 631 aa19.54■□□□□ 0.72
UBC-208ENST00000540700 HMGCRP04035 888 aa19.54■□□□□ 0.72
UBC-208ENST00000540700 LIFRP42702 1097 aa19.54■□□□□ 0.72
UBC-208ENST00000540700 MAGEA10P43363 369 aaPredicted RBP19.54■□□□□ 0.72
UBC-208ENST00000540700 TRIM32Q13049 653 aa19.54■□□□□ 0.72
UBC-208ENST00000540700 PPP4R3BQ5MIZ7 849 aa19.54■□□□□ 0.72
UBC-208ENST00000540700 FAM83BQ5T0W9 1011 aa19.54■□□□□ 0.72
UBC-208ENST00000540700 SGMS1Q86VZ5 419 aa19.54■□□□□ 0.72
UBC-208ENST00000540700 RPAP3Q9H6T3 665 aaPredicted RBP19.54■□□□□ 0.72
UBC-208ENST00000540700 KAT14Q9H8E8 782 aa19.54■□□□□ 0.72
UBC-208ENST00000540700 UPF2Q9HAU5 1272 aaKnown RBP19.54■□□□□ 0.72
UBC-208ENST00000540700 GOPCQ9HD26 462 aa19.54■□□□□ 0.72
UBC-208ENST00000540700 TROAPQ12815 778 aa19.53■□□□□ 0.72
UBC-208ENST00000540700 SART3Q15020 963 aaKnown RBP19.53■□□□□ 0.72
UBC-208ENST00000540700 FAM110CQ1W6H9 321 aa19.53■□□□□ 0.72
UBC-208ENST00000540700 FBXL16Q8N461 479 aa19.53■□□□□ 0.72
UBC-208ENST00000540700 LPAR1Q92633 364 aa19.53■□□□□ 0.72
UBC-208ENST00000540700 GMCL1Q96IK5 515 aa19.53■□□□□ 0.72
UBC-208ENST00000540700 PDRG1Q9NUG6 133 aa19.53■□□□□ 0.72
UBC-208ENST00000540700 FBXO28Q9NVF7 368 aa19.53■□□□□ 0.72
UBC-208ENST00000540700 PNMA3Q9UL41 463 aa19.53■□□□□ 0.72
UBC-208ENST00000540700 FRMPD2Q68DX3 1309 aaPredicted RBP19.52■□□□□ 0.72
UBC-208ENST00000540700 ERICH2A1L162 156 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 WDR46O15213 610 aaKnown RBP19.52■□□□□ 0.72
UBC-208ENST00000540700 RXRAP19793 462 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 HOXA7P31268 230 aaPredicted RBP19.52■□□□□ 0.72
UBC-208ENST00000540700 APOBRQ0VD83 1088 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 TTBK2Q6IQ55 1244 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 GPR153Q6NV75 609 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 CATSPERGQ6ZRH7 1159 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 KCTD1Q719H9 257 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 ZNF654Q8IZM8 581 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 ANKLE1Q8NAG6 615 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 BRF1Q92994 677 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 C11orf49Q9H6J7 331 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 HMX1Q9NP08 348 aaPredicted RBP19.52■□□□□ 0.72
UBC-208ENST00000540700 STXBP5LQ9Y2K9 1186 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 RLFQ13129 1914 aa19.52■□□□□ 0.72
UBC-208ENST00000540700 PEX10O60683 326 aa19.51■□□□□ 0.71
UBC-208ENST00000540700 GOLGA8HP0CJ92 632 aa19.51■□□□□ 0.71
UBC-208ENST00000540700 SLC35G1Q2M3R5 365 aa19.51■□□□□ 0.71
UBC-208ENST00000540700 TDHQ8IZJ6 230 aa19.51■□□□□ 0.71
UBC-208ENST00000540700 DCAF4Q8WV16 495 aa19.51■□□□□ 0.71
UBC-208ENST00000540700 UBE2OQ9C0C9 1292 aaKnown RBP19.51■□□□□ 0.71
UBC-208ENST00000540700 ASCC2Q9H1I8 757 aaPredicted RBP19.51■□□□□ 0.71
UBC-208ENST00000540700 CPVLQ9H3G5 476 aa19.51■□□□□ 0.71
UBC-208ENST00000540700 MTMR10Q9NXD2 777 aa19.51■□□□□ 0.71
UBC-208ENST00000540700 RPTORQ8N122 1335 aa19.51■□□□□ 0.71
UBC-208ENST00000540700 BMP3P12645 472 aa19.5■□□□□ 0.71
UBC-208ENST00000540700 NEK4P51957 841 aa19.5■□□□□ 0.71
UBC-208ENST00000540700 AK2P54819 239 aa19.5■□□□□ 0.71
UBC-208ENST00000540700 ZNF543Q08ER8 600 aa19.5■□□□□ 0.71
UBC-208ENST00000540700 LRIT3Q3SXY7 679 aa19.5■□□□□ 0.71
UBC-208ENST00000540700 APOA5Q6Q788 366 aa19.5■□□□□ 0.71
UBC-208ENST00000540700 STAG2Q8N3U4 1231 aa19.5■□□□□ 0.71
UBC-208ENST00000540700 P2RX7Q99572 595 aaKnown RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms