RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 PAG1Q9NWQ8 432 aa17.92■□□□□ 0.46
USB1-203ENST00000539737 SWAP70Q9UH65 585 aa17.92■□□□□ 0.46
USB1-203ENST00000539737 ZHX1Q9UKY1 873 aaPredicted RBP17.92■□□□□ 0.46
USB1-203ENST00000539737 ADAMTS5Q9UNA0 930 aa17.92■□□□□ 0.46
USB1-203ENST00000539737 CHD9Q3L8U1 2897 aa17.91■□□□□ 0.46
USB1-203ENST00000539737 KIAA0355O15063 1070 aa17.91■□□□□ 0.46
USB1-203ENST00000539737 SNAI1O95863 264 aaPredicted RBP17.91■□□□□ 0.46
USB1-203ENST00000539737 DNAJB2P25686 324 aa17.91■□□□□ 0.46
USB1-203ENST00000539737 FPGSQ05932 587 aa17.91■□□□□ 0.46
USB1-203ENST00000539737 KCTD2Q14681 263 aa17.91■□□□□ 0.46
USB1-203ENST00000539737 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.91■□□□□ 0.46
USB1-203ENST00000539737 SLC5A4Q9NY91 659 aa17.91■□□□□ 0.46
USB1-203ENST00000539737 PPP1R9AQ9ULJ8 1098 aa17.91■□□□□ 0.46
USB1-203ENST00000539737 TACC3Q9Y6A5 838 aa17.91■□□□□ 0.46
USB1-203ENST00000539737 SLC4A4Q9Y6R1 1079 aa17.91■□□□□ 0.46
USB1-203ENST00000539737 MYH7P12883 1935 aa17.9■□□□□ 0.46
USB1-203ENST00000539737 SMARCA5O60264 1052 aaPredicted RBP17.9■□□□□ 0.46
USB1-203ENST00000539737 ACRP10323 421 aa17.9■□□□□ 0.46
USB1-203ENST00000539737 ACLYP53396 1101 aa17.9■□□□□ 0.46
USB1-203ENST00000539737 C1orf53Q5VUE5 145 aa17.9■□□□□ 0.46
USB1-203ENST00000539737 CTR9Q6PD62 1173 aa17.9■□□□□ 0.46
USB1-203ENST00000539737 C16orf86Q6ZW13 317 aa17.9■□□□□ 0.46
USB1-203ENST00000539737 C16orf59Q7L2K0 433 aa17.9■□□□□ 0.46
USB1-203ENST00000539737 RNF180Q86T96 592 aa17.9■□□□□ 0.46
USB1-203ENST00000539737 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.9■□□□□ 0.46
USB1-203ENST00000539737 PUS7LQ9H0K6 701 aaKnown RBP17.9■□□□□ 0.46
USB1-203ENST00000539737 RWDD1Q9H446 243 aaPredicted RBP17.9■□□□□ 0.46
USB1-203ENST00000539737 ZBTB47Q9UFB7 747 aaPredicted RBP17.9■□□□□ 0.46
USB1-203ENST00000539737 SLC25A27O95847 323 aa17.89■□□□□ 0.45
USB1-203ENST00000539737 AKR1A1P14550 325 aa17.89■□□□□ 0.45
USB1-203ENST00000539737 KCNA10Q16322 511 aa17.89■□□□□ 0.45
USB1-203ENST00000539737 SNRNP48Q6IEG0 339 aaKnown RBP17.89■□□□□ 0.45
USB1-203ENST00000539737 CPXCR1Q8N123 301 aa17.89■□□□□ 0.45
USB1-203ENST00000539737 GPATCH3Q96I76 525 aa17.89■□□□□ 0.45
USB1-203ENST00000539737 FGD4Q96M96 766 aa17.89■□□□□ 0.45
USB1-203ENST00000539737 PPP1R12CQ9BZL4 782 aa17.89■□□□□ 0.45
USB1-203ENST00000539737 STARD7Q9NQZ5 370 aa17.89■□□□□ 0.45
USB1-203ENST00000539737 GREB1LQ9C091 1923 aaPredicted RBP17.89■□□□□ 0.45
USB1-203ENST00000539737 IRX6P78412 446 aaPredicted RBP17.88■□□□□ 0.45
USB1-203ENST00000539737 RAVER2Q9HCJ3 691 aaKnown RBP17.88■□□□□ 0.45
USB1-203ENST00000539737 TSHZ3Q63HK5 1081 aa17.87■□□□□ 0.45
USB1-203ENST00000539737 CCSAPQ6IQ19 270 aaPredicted RBP17.87■□□□□ 0.45
USB1-203ENST00000539737 KLHDC9Q8NEP7 349 aa17.87■□□□□ 0.45
USB1-203ENST00000539737 PRDM12Q9H4Q4 367 aa17.87■□□□□ 0.45
USB1-203ENST00000539737 ZNF576Q9H609 170 aa17.87■□□□□ 0.45
USB1-203ENST00000539737 SH2D4AQ9H788 454 aa17.87■□□□□ 0.45
USB1-203ENST00000539737 ATP8A2Q9NTI2 1148 aa17.87■□□□□ 0.45
USB1-203ENST00000539737 PRDM1O75626 825 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 NDUFB10O96000 172 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 CSF2RAP15509 400 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 RASA1P20936 1047 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 BEX3Q00994 111 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 CCDC85BQ15834 202 aaPredicted RBP17.86■□□□□ 0.45
USB1-203ENST00000539737 TIFAQ96CG3 184 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 CCDC17Q96LX7 622 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 SLF1Q9BQI6 1058 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.86■□□□□ 0.45
USB1-203ENST00000539737 KANSL2Q9H9L4 492 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 GOPCQ9HD26 462 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 TBX21Q9UL17 535 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 CNPY2Q9Y2B0 182 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 UMODL1Q5DID0 1318 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 CHD7Q9P2D1 2997 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 REV3LO60673 3130 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 GBF1Q92538 1859 aa17.86■□□□□ 0.45
USB1-203ENST00000539737 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.85■□□□□ 0.45
USB1-203ENST00000539737 C6orf222P0C671 652 aaPredicted RBP17.85■□□□□ 0.45
USB1-203ENST00000539737 ATP5JP18859 108 aa17.85■□□□□ 0.45
USB1-203ENST00000539737 TMEM63BQ5T3F8 832 aa17.85■□□□□ 0.45
USB1-203ENST00000539737 RASGRP2Q7LDG7 609 aa17.85■□□□□ 0.45
USB1-203ENST00000539737 ANKRD33Q7Z3H0 272 aa17.85■□□□□ 0.45
USB1-203ENST00000539737 LRRC47Q8N1G4 583 aaKnown RBP17.85■□□□□ 0.45
USB1-203ENST00000539737 KIFC2Q96AC6 838 aa17.85■□□□□ 0.45
USB1-203ENST00000539737 ROBO3Q96MS0 1386 aa17.85■□□□□ 0.45
USB1-203ENST00000539737 HAUS7Q99871 368 aa17.85■□□□□ 0.45
USB1-203ENST00000539737 PBX4Q9BYU1 374 aa17.85■□□□□ 0.45
USB1-203ENST00000539737 HOMER2Q9NSB8 354 aa17.85■□□□□ 0.45
USB1-203ENST00000539737 ECHDC1Q9NTX5 307 aa17.85■□□□□ 0.45
USB1-203ENST00000539737 MYH4Q9Y623 1939 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 DNAJC25-GNG10A0A024R161 153 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 MINDY4BA8MYZ0 360 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 TIMP1P01033 207 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
USB1-203ENST00000539737 CYP2C18P33260 490 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 SNAP25P60880 206 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 ADGRE1Q14246 886 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 TMEM240Q5SV17 173 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 CCDC129Q6ZRS4 1044 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 VTI1AQ96AJ9 217 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 DDX11Q96FC9 970 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 DDRGK1Q96HY6 314 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.84■□□□□ 0.45
USB1-203ENST00000539737 CXXC1Q9P0U4 656 aaPredicted RBP17.84■□□□□ 0.45
USB1-203ENST00000539737 NRBP1Q9UHY1 535 aa17.84■□□□□ 0.45
USB1-203ENST00000539737 DIS3Q9Y2L1 958 aaKnown RBP17.84■□□□□ 0.45
USB1-203ENST00000539737 TTC41PQ6P2S7 1318 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.83■□□□□ 0.44
USB1-203ENST00000539737 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.83■□□□□ 0.44
USB1-203ENST00000539737 DCDC2CA8MYV0 355 aa17.83■□□□□ 0.44
USB1-203ENST00000539737 F5H6K3 240 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms