RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 VAT1LQ9HCJ6 419 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 MAD2L2Q9UI95 211 aa13.1□□□□□ -0.31
USP35-207ENST00000530546 SCNN1DP51172 638 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 GTF2A1P52655 376 aaPredicted RBP13.09□□□□□ -0.31
USP35-207ENST00000530546 MDM2Q00987 491 aaPredicted RBP13.09□□□□□ -0.31
USP35-207ENST00000530546 DHX8Q14562 1220 aaKnown RBP13.09□□□□□ -0.31
USP35-207ENST00000530546 GRM4Q14833 912 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 SLC35G1Q2M3R5 365 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 ZNF579Q8NAF0 562 aaKnown RBP13.09□□□□□ -0.31
USP35-207ENST00000530546 TBC1D22AQ8WUA7 517 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 STAMQ92783 540 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 ZNF622Q969S3 477 aaKnown RBP eCLIP13.09□□□□□ -0.31
USP35-207ENST00000530546 PSD3Q9NYI0 1048 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 DAGLAQ9Y4D2 1042 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.09□□□□□ -0.31
USP35-207ENST00000530546 MMP10P09238 476 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 FANCCQ00597 558 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 MYL5Q02045 173 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 TYW1BQ6NUM6 668 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 HOMER1Q86YM7 354 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 ATP6V0A2Q9Y487 856 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 LAMB1P07942 1786 aa13.09□□□□□ -0.31
USP35-207ENST00000530546 ACTN4O43707 911 aaKnown RBP13.08□□□□□ -0.31
USP35-207ENST00000530546 SERPINC1P01008 464 aa13.08□□□□□ -0.31
USP35-207ENST00000530546 PLCG2P16885 1265 aa13.08□□□□□ -0.31
USP35-207ENST00000530546 DPP8Q6V1X1 898 aaPredicted RBP13.08□□□□□ -0.31
USP35-207ENST00000530546 SLF2Q8IX21 1173 aa13.08□□□□□ -0.31
USP35-207ENST00000530546 TRMT44Q8IYL2 757 aaKnown RBP13.08□□□□□ -0.31
USP35-207ENST00000530546 BLIDQ8IZY5 108 aa13.08□□□□□ -0.31
USP35-207ENST00000530546 SRRTQ9BXP5 876 aaKnown RBP13.08□□□□□ -0.31
USP35-207ENST00000530546 ZNF287Q9HBT7 754 aa13.08□□□□□ -0.31
USP35-207ENST00000530546 FANCLQ9NW38 375 aa13.08□□□□□ -0.31
USP35-207ENST00000530546 FAM205AQ6ZU69 1335 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 PSDA5PKW4 1024 aaPredicted RBP13.08□□□□□ -0.32
USP35-207ENST00000530546 CYTH3O43739 400 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 SRGNP10124 158 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 EIF6P56537 245 aaKnown RBP13.08□□□□□ -0.32
USP35-207ENST00000530546 USP17L2Q6R6M4 530 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 NLGN1Q8N2Q7 840 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 IQUBQ8NA54 791 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 DPF2Q92785 391 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 TRMT1Q9NXH9 659 aaKnown RBP13.08□□□□□ -0.32
USP35-207ENST00000530546 TTF2Q9UNY4 1162 aaKnown RBP13.08□□□□□ -0.32
USP35-207ENST00000530546 ROBO3Q96MS0 1386 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 KLRF2D3W0D1 207 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 C16orf86Q6ZW13 317 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 CERS5Q8N5B7 392 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 CEP95Q96GE4 821 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 HSD3B7Q9H2F3 369 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 IMPACTQ9P2X3 320 aa13.08□□□□□ -0.32
USP35-207ENST00000530546 KLRG2A4D1S0 409 aaPredicted RBP13.07□□□□□ -0.32
USP35-207ENST00000530546 IKBKBO14920 756 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 GNAQP50148 359 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 CCDC178Q5BJE1 867 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 WWC2Q6AWC2 1192 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 SRLQ86TD4 932 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 UBXN4Q92575 508 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 ANKS1AQ92625 1134 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 POLR3GO15318 223 aaPredicted RBP13.07□□□□□ -0.32
USP35-207ENST00000530546 CALML3P27482 149 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 CDC25AP30304 524 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 CFAP100Q494V2 611 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 CLEC10AQ8IUN9 316 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 C10orf67Q8IYJ2 551 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 FERMT2Q96AC1 680 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 COA1Q9GZY4 146 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 PARP3Q9Y6F1 533 aa13.07□□□□□ -0.32
USP35-207ENST00000530546 CCDC194A0A1B0GVG4 234 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 BMP15O95972 392 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 NPR1P16066 1061 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 UBASH3AP57075 661 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 ATP2C1P98194 919 aaPredicted RBP13.06□□□□□ -0.32
USP35-207ENST00000530546 FMR1Q06787 632 aaKnown RBP eCLIP13.06□□□□□ -0.32
USP35-207ENST00000530546 KLHL10Q6JEL2 608 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 EXOC4Q96A65 974 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 UBA5Q9GZZ9 404 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 OSBPL5Q9H0X9 879 aaPredicted RBP13.06□□□□□ -0.32
USP35-207ENST00000530546 TMX4Q9H1E5 349 aaPredicted RBP13.06□□□□□ -0.32
USP35-207ENST00000530546 TCP11L1Q9NUJ3 509 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 PCDHA4Q9UN74 947 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 GAKO14976 1311 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 BRWD3Q6RI45 1802 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 SLURP2P0DP57 97 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 NEDD1Q8NHV4 660 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 FAM163AQ96GL9 167 aaPredicted RBP13.06□□□□□ -0.32
USP35-207ENST00000530546 DBNDD1Q9H9R9 158 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 USP40Q9NVE5 1235 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 PHLPP2Q6ZVD8 1323 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 DLEC1Q9Y238 1755 aa13.06□□□□□ -0.32
USP35-207ENST00000530546 CCP110O43303 1012 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 PARP1P09874 1014 aaKnown RBP13.05□□□□□ -0.32
USP35-207ENST00000530546 KANK3Q6NY19 840 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 DDX4Q9NQI0 724 aaKnown RBP13.05□□□□□ -0.32
USP35-207ENST00000530546 KCNQ5Q9NR82 932 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 FRMPD2Q68DX3 1309 aaPredicted RBP13.05□□□□□ -0.32
USP35-207ENST00000530546 PALM3A6NDB9 673 aaPredicted RBP13.05□□□□□ -0.32
USP35-207ENST00000530546 IL17AQ16552 155 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 INF2Q27J81 1249 aa13.05□□□□□ -0.32
USP35-207ENST00000530546 LRRC47Q8N1G4 583 aaKnown RBP13.05□□□□□ -0.32
USP35-207ENST00000530546 CCDC150Q8NCX0 1101 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms